RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 RUNX1T1Q06455 604 aa17.54■□□□□ 0.4
RBFOX1-215ENST00000553186 ACSM1Q08AH1 577 aa17.54■□□□□ 0.4
RBFOX1-215ENST00000553186 TPBGQ13641 420 aa17.54■□□□□ 0.4
RBFOX1-215ENST00000553186 SOWAHCQ53LP3 525 aaPredicted RBP17.54■□□□□ 0.4
RBFOX1-215ENST00000553186 LIPKQ5VXJ0 399 aa17.54■□□□□ 0.4
RBFOX1-215ENST00000553186 TMPPEQ6ZT21 453 aa17.54■□□□□ 0.4
RBFOX1-215ENST00000553186 PM20D2Q8IYS1 436 aa17.54■□□□□ 0.4
RBFOX1-215ENST00000553186 ADPRHL1Q8NDY3 354 aa17.54■□□□□ 0.4
RBFOX1-215ENST00000553186 PIGQQ9BRB3 760 aa17.54■□□□□ 0.4
RBFOX1-215ENST00000553186 SRA1Q9HD15 236 aaKnown RBP17.54■□□□□ 0.4
RBFOX1-215ENST00000553186 HCCSP53701 268 aa17.53■□□□□ 0.4
RBFOX1-215ENST00000553186 RRADP55042 308 aa17.53■□□□□ 0.4
RBFOX1-215ENST00000553186 ACTC1P68032 377 aa17.53■□□□□ 0.4
RBFOX1-215ENST00000553186 ACTA1P68133 377 aa17.53■□□□□ 0.4
RBFOX1-215ENST00000553186 MELKQ14680 651 aa17.53■□□□□ 0.4
RBFOX1-215ENST00000553186 EEF1A1P5Q5VTE0 462 aa17.53■□□□□ 0.4
RBFOX1-215ENST00000553186 OR2T4Q8NH00 348 aa17.53■□□□□ 0.4
RBFOX1-215ENST00000553186 HES7Q9BYE0 225 aa17.53■□□□□ 0.4
RBFOX1-215ENST00000553186 VSX1Q9NZR4 365 aaPredicted RBP17.53■□□□□ 0.4
RBFOX1-215ENST00000553186 ZNF814B7Z6K7 855 aa17.53■□□□□ 0.4
RBFOX1-215ENST00000553186 SELENOFO60613 162 aa17.53■□□□□ 0.4
RBFOX1-215ENST00000553186 IFNGR1P15260 489 aa17.53■□□□□ 0.4
RBFOX1-215ENST00000553186 NAA10P41227 235 aaPredicted RBP17.53■□□□□ 0.4
RBFOX1-215ENST00000553186 OR2B6P58173 313 aa17.53■□□□□ 0.4
RBFOX1-215ENST00000553186 HSF1Q00613 529 aa17.53■□□□□ 0.4
RBFOX1-215ENST00000553186 CLN3Q13286 438 aa17.53■□□□□ 0.4
RBFOX1-215ENST00000553186 TOMM20Q15388 145 aa17.53■□□□□ 0.4
RBFOX1-215ENST00000553186 ZNF239Q16600 458 aaKnown RBP17.53■□□□□ 0.4
RBFOX1-215ENST00000553186 SSX6Q7RTT6 188 aa17.53■□□□□ 0.4
RBFOX1-215ENST00000553186 YRDCQ86U90 279 aaKnown RBP17.53■□□□□ 0.4
RBFOX1-215ENST00000553186 WDFY1Q8IWB7 410 aa17.53■□□□□ 0.4
RBFOX1-215ENST00000553186 RFLNBQ8N5W9 214 aa17.53■□□□□ 0.4
RBFOX1-215ENST00000553186 FAM173AQ9BQD7 235 aa17.53■□□□□ 0.4
RBFOX1-215ENST00000553186 NUAK2Q9H093 628 aa17.53■□□□□ 0.4
RBFOX1-215ENST00000553186 MRPS18CQ9Y3D5 142 aaKnown RBP17.53■□□□□ 0.4
RBFOX1-215ENST00000553186 TRABD2BA6NFA1 517 aa17.52■□□□□ 0.4
RBFOX1-215ENST00000553186 A6NL46 340 aa17.52■□□□□ 0.4
RBFOX1-215ENST00000553186 PMS2P2O95744 297 aa17.52■□□□□ 0.4
RBFOX1-215ENST00000553186 OR2T7P0C7T2 308 aa17.52■□□□□ 0.4
RBFOX1-215ENST00000553186 RAC1P63000 192 aa17.52■□□□□ 0.4
RBFOX1-215ENST00000553186 POU3F1Q03052 451 aaPredicted RBP17.52■□□□□ 0.4
RBFOX1-215ENST00000553186 AGAP7PQ5VUJ5 663 aa17.52■□□□□ 0.4
RBFOX1-215ENST00000553186 TMPRSS11AQ6ZMR5 421 aa17.52■□□□□ 0.4
RBFOX1-215ENST00000553186 ZNF511Q8NB15 262 aa17.52■□□□□ 0.4
RBFOX1-215ENST00000553186 FAM83FQ8NEG4 500 aaPredicted RBP17.52■□□□□ 0.4
RBFOX1-215ENST00000553186 OR2M7Q8NG81 312 aa17.52■□□□□ 0.4
RBFOX1-215ENST00000553186 OR2T27Q8NH04 317 aa17.52■□□□□ 0.4
RBFOX1-215ENST00000553186 ASB10Q8WXI3 467 aa17.52■□□□□ 0.4
RBFOX1-215ENST00000553186 AGAP4Q96P64 663 aa17.52■□□□□ 0.4
RBFOX1-215ENST00000553186 CHCHD6Q9BRQ6 235 aa17.52■□□□□ 0.4
RBFOX1-215ENST00000553186 CENPOQ9BU64 300 aa17.52■□□□□ 0.4
RBFOX1-215ENST00000553186 DCHS1Q96JQ0 3298 aa17.52■□□□□ 0.4
RBFOX1-215ENST00000553186 LOC400499M0QZD8 3231 aa17.52■□□□□ 0.39
RBFOX1-215ENST00000553186 SULT2B1O00204 365 aa17.52■□□□□ 0.39
RBFOX1-215ENST00000553186 CDK2AP1O14519 115 aa17.52■□□□□ 0.39
RBFOX1-215ENST00000553186 GPX5O75715 221 aa17.52■□□□□ 0.39
RBFOX1-215ENST00000553186 DAP3P51398 398 aaKnown RBP17.52■□□□□ 0.39
RBFOX1-215ENST00000553186 RPS3AP61247 264 aaKnown RBP17.52■□□□□ 0.39
RBFOX1-215ENST00000553186 H3F3AP84243 136 aa17.52■□□□□ 0.39
RBFOX1-215ENST00000553186 SLC35D2Q76EJ3 337 aa17.52■□□□□ 0.39
RBFOX1-215ENST00000553186 ZBTB46Q86UZ6 589 aa17.52■□□□□ 0.39
RBFOX1-215ENST00000553186 MDS2Q8NDY4 140 aa17.52■□□□□ 0.39
RBFOX1-215ENST00000553186 TXNDC15Q96J42 360 aa17.52■□□□□ 0.39
RBFOX1-215ENST00000553186 ZMIZ1Q9ULJ6 1067 aa17.52■□□□□ 0.39
RBFOX1-215ENST00000553186 BOKQ9UMX3 212 aaPredicted RBP17.52■□□□□ 0.39
RBFOX1-215ENST00000553186 PCDHGB7Q9Y5F8 929 aa17.52■□□□□ 0.39
RBFOX1-215ENST00000553186 NOX1Q9Y5S8 564 aa17.52■□□□□ 0.39
RBFOX1-215ENST00000553186 LOC100506127A0A0U1RQW1 187 aa17.51■□□□□ 0.39
RBFOX1-215ENST00000553186 SLC22A23A1A5C7 686 aa17.51■□□□□ 0.39
RBFOX1-215ENST00000553186 BCL10O95999 233 aa17.51■□□□□ 0.39
RBFOX1-215ENST00000553186 KLK2P20151 261 aa17.51■□□□□ 0.39
RBFOX1-215ENST00000553186 CRYBB2P43320 205 aa17.51■□□□□ 0.39
RBFOX1-215ENST00000553186 SH3BGRP55822 239 aaPredicted RBP17.51■□□□□ 0.39
RBFOX1-215ENST00000553186 SLC35A1P78382 337 aa17.51■□□□□ 0.39
RBFOX1-215ENST00000553186 TIMM50Q3ZCQ8 353 aa17.51■□□□□ 0.39
RBFOX1-215ENST00000553186 SULF2Q8IWU5 870 aa17.51■□□□□ 0.39
RBFOX1-215ENST00000553186 SLC35F2Q8IXU6 374 aa17.51■□□□□ 0.39
RBFOX1-215ENST00000553186 OR14L1PQ8NHC6 308 aa17.51■□□□□ 0.39
RBFOX1-215ENST00000553186 OR2B2Q9GZK3 357 aa17.51■□□□□ 0.39
RBFOX1-215ENST00000553186 RNF167Q9H6Y7 350 aa17.51■□□□□ 0.39
RBFOX1-215ENST00000553186 ZNF552Q9H707 407 aaPredicted RBP17.51■□□□□ 0.39
RBFOX1-215ENST00000553186 MED29Q9NX70 200 aa17.51■□□□□ 0.39
RBFOX1-215ENST00000553186 SF3B6Q9Y3B4 125 aaKnown RBP17.51■□□□□ 0.39
RBFOX1-215ENST00000553186 FKBP7Q9Y680 259 aa17.51■□□□□ 0.39
RBFOX1-215ENST00000553186 CFAP47Q6ZTR5 3102 aa17.51■□□□□ 0.39
RBFOX1-215ENST00000553186 ZFHX4Q86UP3 3567 aa17.51■□□□□ 0.39
RBFOX1-215ENST00000553186 NPIPA5E9PKD4 350 aa17.5■□□□□ 0.39
RBFOX1-215ENST00000553186 AKAP8O43823 692 aaKnown RBP17.5■□□□□ 0.39
RBFOX1-215ENST00000553186 RAMP1O60894 148 aa17.5■□□□□ 0.39
RBFOX1-215ENST00000553186 PSMA1P25786 263 aaKnown RBP17.5■□□□□ 0.39
RBFOX1-215ENST00000553186 KLBQ86Z14 1044 aa17.5■□□□□ 0.39
RBFOX1-215ENST00000553186 TIGD4Q8IY51 512 aa17.5■□□□□ 0.39
RBFOX1-215ENST00000553186 ZFP41Q8N8Y5 198 aa17.5■□□□□ 0.39
RBFOX1-215ENST00000553186 BABAM2Q9NXR7 383 aa17.5■□□□□ 0.39
RBFOX1-215ENST00000553186 NPIPA1Q9UND3 350 aa17.5■□□□□ 0.39
RBFOX1-215ENST00000553186 COPS3Q9UNS2 423 aa17.5■□□□□ 0.39
RBFOX1-215ENST00000553186 B9D1Q9UPM9 204 aa17.5■□□□□ 0.39
RBFOX1-215ENST00000553186 PNMA8CA0A1B0GUJ8 204 aa17.5■□□□□ 0.39
RBFOX1-215ENST00000553186 OR5H15A6NDH6 313 aa17.5■□□□□ 0.39
RBFOX1-215ENST00000553186 A6NIZ1 184 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 176.7 ms