RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 SSX8Q7RTT4 187 aa13.78□□□□□ -0.2
DDX54-205ENST00000548786 MOSPD2Q8NHP6 518 aa13.78□□□□□ -0.2
DDX54-205ENST00000548786 GTPBP3Q969Y2 492 aaKnown RBP13.78□□□□□ -0.2
DDX54-205ENST00000548786 CDRT15Q96T59 188 aa13.78□□□□□ -0.2
DDX54-205ENST00000548786 PIP5K1AQ99755 562 aa13.78□□□□□ -0.2
DDX54-205ENST00000548786 ULBP2Q9BZM5 246 aa13.78□□□□□ -0.2
DDX54-205ENST00000548786 CXorf56Q9H5V9 222 aa13.78□□□□□ -0.2
DDX54-205ENST00000548786 SEC61A2Q9H9S3 476 aa13.78□□□□□ -0.2
DDX54-205ENST00000548786 B3GAT2Q9NPZ5 323 aa13.78□□□□□ -0.2
DDX54-205ENST00000548786 MAN2C1Q9NTJ4 1040 aa13.78□□□□□ -0.2
DDX54-205ENST00000548786 ATP23Q9Y6H3 246 aa13.78□□□□□ -0.2
DDX54-205ENST00000548786 USF3Q68DE3 2245 aa13.78□□□□□ -0.2
DDX54-205ENST00000548786 IGHV1-18A0A0C4DH31 117 aa13.77□□□□□ -0.21
DDX54-205ENST00000548786 ZNF503-AS2A6NEH8 195 aa13.77□□□□□ -0.21
DDX54-205ENST00000548786 MCIDASD6RGH6 385 aa13.77□□□□□ -0.21
DDX54-205ENST00000548786 E7EQL1 145 aa13.77□□□□□ -0.21
DDX54-205ENST00000548786 RPL36A-HNRNPH2H7BZ11 118 aa13.77□□□□□ -0.21
DDX54-205ENST00000548786 hCG_2039718K7EN88 272 aa13.77□□□□□ -0.21
DDX54-205ENST00000548786 GMNNO75496 209 aa13.77□□□□□ -0.21
DDX54-205ENST00000548786 DANCRP0C864 163 aa13.77□□□□□ -0.21
DDX54-205ENST00000548786 THRBP10828 461 aa13.77□□□□□ -0.21
DDX54-205ENST00000548786 B4GALT1P15291 398 aa13.77□□□□□ -0.21
DDX54-205ENST00000548786 MTORP42345 2549 aa13.77□□□□□ -0.21
DDX54-205ENST00000548786 SH3BGRP55822 239 aaPredicted RBP13.77□□□□□ -0.21
DDX54-205ENST00000548786 RPS4XP62701 263 aaKnown RBP13.77□□□□□ -0.21
DDX54-205ENST00000548786 NPRL3Q12980 569 aa13.77□□□□□ -0.21
DDX54-205ENST00000548786 GKAP1Q5VSY0 366 aaPredicted RBP13.77□□□□□ -0.21
DDX54-205ENST00000548786 YTHDF3Q7Z739 585 aaKnown RBP13.77□□□□□ -0.21
DDX54-205ENST00000548786 NRMQ8IXM6 262 aa13.77□□□□□ -0.21
DDX54-205ENST00000548786 DEFB107AQ8IZN7 70 aa13.77□□□□□ -0.21
DDX54-205ENST00000548786 OFCC1Q8IZS5 231 aa13.77□□□□□ -0.21
DDX54-205ENST00000548786 PGAM4Q8N0Y7 254 aa13.77□□□□□ -0.21
DDX54-205ENST00000548786 DEPDC4Q8N2C3 294 aa13.77□□□□□ -0.21
DDX54-205ENST00000548786 FITM2Q8N6M3 262 aa13.77□□□□□ -0.21
DDX54-205ENST00000548786 HTRA1Q92743 480 aa13.77□□□□□ -0.21
DDX54-205ENST00000548786 ZNF469Q96JG9 3925 aaPredicted RBP13.77□□□□□ -0.21
DDX54-205ENST00000548786 HS6ST2Q96MM7 605 aa13.77□□□□□ -0.21
DDX54-205ENST00000548786 RPS6KA6Q9UK32 745 aa13.77□□□□□ -0.21
DDX54-205ENST00000548786 MOKQ9UQ07 419 aa13.77□□□□□ -0.21
DDX54-205ENST00000548786 MGAT4BQ9UQ53 548 aa13.77□□□□□ -0.21
DDX54-205ENST00000548786 POFUT2Q9Y2G5 429 aa13.77□□□□□ -0.21
DDX54-205ENST00000548786 ZNF99A8MXY4 864 aaPredicted RBP13.76□□□□□ -0.21
DDX54-205ENST00000548786 ARHGEF9O43307 516 aa13.76□□□□□ -0.21
DDX54-205ENST00000548786 DIRAS1O95057 198 aa13.76□□□□□ -0.21
DDX54-205ENST00000548786 CELA3BP08861 270 aa13.76□□□□□ -0.21
DDX54-205ENST00000548786 SAGP10523 405 aaPredicted RBP13.76□□□□□ -0.21
DDX54-205ENST00000548786 MAKP20794 623 aa13.76□□□□□ -0.21
DDX54-205ENST00000548786 ATP5J2P56134 94 aa13.76□□□□□ -0.21
DDX54-205ENST00000548786 MYBPC1Q00872 1141 aa13.76□□□□□ -0.21
DDX54-205ENST00000548786 ZP4Q12836 540 aa13.76□□□□□ -0.21
DDX54-205ENST00000548786 TOP3AQ13472 1001 aaPredicted RBP13.76□□□□□ -0.21
DDX54-205ENST00000548786 LAPTM4AQ15012 233 aa13.76□□□□□ -0.21
DDX54-205ENST00000548786 TRAM2Q15035 370 aa13.76□□□□□ -0.21
DDX54-205ENST00000548786 TBPL2Q6SJ96 375 aa13.76□□□□□ -0.21
DDX54-205ENST00000548786 ZNF730Q6ZMV8 503 aa13.76□□□□□ -0.21
DDX54-205ENST00000548786 ZNF813Q6ZN06 617 aa13.76□□□□□ -0.21
DDX54-205ENST00000548786 MYPOPQ86VE0 399 aaPredicted RBP13.76□□□□□ -0.21
DDX54-205ENST00000548786 IGFN1Q86VF2 1251 aa13.76□□□□□ -0.21
DDX54-205ENST00000548786 SYT14Q8NB59 555 aa13.76□□□□□ -0.21
DDX54-205ENST00000548786 CCDC197Q8NCU1 140 aa13.76□□□□□ -0.21
DDX54-205ENST00000548786 IGFBPL1Q8WX77 278 aa13.76□□□□□ -0.21
DDX54-205ENST00000548786 ZNF566Q969W8 418 aa13.76□□□□□ -0.21
DDX54-205ENST00000548786 BPIFA2Q96DR5 249 aa13.76□□□□□ -0.21
DDX54-205ENST00000548786 Q96MF0 132 aa13.76□□□□□ -0.21
DDX54-205ENST00000548786 SLC38A2Q96QD8 506 aa13.76□□□□□ -0.21
DDX54-205ENST00000548786 TMUB1Q9BVT8 246 aa13.76□□□□□ -0.21
DDX54-205ENST00000548786 TRAV27A0A087WT01 109 aa13.75□□□□□ -0.21
DDX54-205ENST00000548786 ARPC4-TTLL3A0A0A6YYG9 625 aa13.75□□□□□ -0.21
DDX54-205ENST00000548786 A0A1W2PRG6 482 aa13.75□□□□□ -0.21
DDX54-205ENST00000548786 FAM107AO95990 144 aa13.75□□□□□ -0.21
DDX54-205ENST00000548786 BCL10O95999 233 aa13.75□□□□□ -0.21
DDX54-205ENST00000548786 HLA-HP01893 362 aa13.75□□□□□ -0.21
DDX54-205ENST00000548786 CD79AP11912 226 aa13.75□□□□□ -0.21
DDX54-205ENST00000548786 GPR4P46093 362 aa13.75□□□□□ -0.21
DDX54-205ENST00000548786 FABP6P51161 128 aa13.75□□□□□ -0.21
DDX54-205ENST00000548786 IDH3GP51553 393 aaPredicted RBP13.75□□□□□ -0.21
DDX54-205ENST00000548786 CLRN1P58418 232 aa13.75□□□□□ -0.21
DDX54-205ENST00000548786 RUNX1T1Q06455 604 aa13.75□□□□□ -0.21
DDX54-205ENST00000548786 PIGFQ07326 219 aa13.75□□□□□ -0.21
DDX54-205ENST00000548786 FGD3Q5JSP0 725 aa13.75□□□□□ -0.21
DDX54-205ENST00000548786 SAMD4BQ5PRF9 694 aaKnown RBP13.75□□□□□ -0.21
DDX54-205ENST00000548786 C16orf89Q6UX73 402 aa13.75□□□□□ -0.21
DDX54-205ENST00000548786 TSEN54Q7Z6J9 526 aaKnown RBP13.75□□□□□ -0.21
DDX54-205ENST00000548786 MDP1Q86V88 176 aa13.75□□□□□ -0.21
DDX54-205ENST00000548786 CYP4Z1Q86W10 505 aa13.75□□□□□ -0.21
DDX54-205ENST00000548786 LRRC75A-AS1Q8N1F1 130 aa13.75□□□□□ -0.21
DDX54-205ENST00000548786 ANKS4BQ8N8V4 417 aa13.75□□□□□ -0.21
DDX54-205ENST00000548786 OR13C2Q8NGS9 318 aa13.75□□□□□ -0.21
DDX54-205ENST00000548786 OR51A7Q8NH64 312 aa13.75□□□□□ -0.21
DDX54-205ENST00000548786 OR6X1Q8NH79 312 aa13.75□□□□□ -0.21
DDX54-205ENST00000548786 LRR1Q96L50 414 aa13.75□□□□□ -0.21
DDX54-205ENST00000548786 KCNS3Q9BQ31 491 aa13.75□□□□□ -0.21
DDX54-205ENST00000548786 OBP2BQ9NPH6 170 aa13.75□□□□□ -0.21
DDX54-205ENST00000548786 INIPQ9NRY2 104 aa13.75□□□□□ -0.21
DDX54-205ENST00000548786 DCAF13Q9NV06 445 aaKnown RBP13.75□□□□□ -0.21
DDX54-205ENST00000548786 GLTPQ9NZD2 209 aa13.75□□□□□ -0.21
DDX54-205ENST00000548786 ENPP4Q9Y6X5 453 aa13.75□□□□□ -0.21
DDX54-205ENST00000548786 PLCE1Q9P212 2302 aa13.75□□□□□ -0.21
DDX54-205ENST00000548786 HEATR1Q9H583 2144 aaKnown RBP13.75□□□□□ -0.21
DDX54-205ENST00000548786 TRIM64A6NGJ6 449 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms