RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 ACSM5Q6NUN0 579 aa8.5□□□□□ -1.05
YBX3-215ENST00000544504 THSD4Q6ZMP0 1018 aa8.5□□□□□ -1.05
YBX3-215ENST00000544504 JAZF1Q86VZ6 243 aa8.5□□□□□ -1.05
YBX3-215ENST00000544504 LRRC75AQ8NAA5 344 aa8.5□□□□□ -1.05
YBX3-215ENST00000544504 CCDC168Q8NDH2 2452 aa8.5□□□□□ -1.05
YBX3-215ENST00000544504 ST6GALNAC3Q8NDV1 305 aa8.5□□□□□ -1.05
YBX3-215ENST00000544504 OR4Q3Q8NH05 313 aa8.5□□□□□ -1.05
YBX3-215ENST00000544504 MOSPD2Q8NHP6 518 aa8.5□□□□□ -1.05
YBX3-215ENST00000544504 RHOXF1Q8NHV9 184 aa8.5□□□□□ -1.05
YBX3-215ENST00000544504 TMEM163Q8TC26 289 aa8.5□□□□□ -1.05
YBX3-215ENST00000544504 HDAC2Q92769 488 aaKnown RBP8.5□□□□□ -1.05
YBX3-215ENST00000544504 ADGRG7Q96K78 797 aa8.5□□□□□ -1.05
YBX3-215ENST00000544504 ADAD1Q96M93 576 aaKnown RBP8.5□□□□□ -1.05
YBX3-215ENST00000544504 GPR137Q96N19 417 aa8.5□□□□□ -1.05
YBX3-215ENST00000544504 TAAR6Q96RI8 345 aa8.5□□□□□ -1.05
YBX3-215ENST00000544504 TIMP4Q99727 224 aa8.5□□□□□ -1.05
YBX3-215ENST00000544504 PRRG4Q9BZD6 226 aa8.5□□□□□ -1.05
YBX3-215ENST00000544504 PRDM14Q9GZV8 571 aa8.5□□□□□ -1.05
YBX3-215ENST00000544504 GP6Q9HCN6 339 aa8.5□□□□□ -1.05
YBX3-215ENST00000544504 SCN3BQ9NY72 215 aa8.5□□□□□ -1.05
YBX3-215ENST00000544504 EMC3Q9P0I2 261 aa8.5□□□□□ -1.05
YBX3-215ENST00000544504 H2AFY2Q9P0M6 372 aaPredicted RBP8.5□□□□□ -1.05
YBX3-215ENST00000544504 CAMK2AQ9UQM7 478 aa8.5□□□□□ -1.05
YBX3-215ENST00000544504 IER3IP1Q9Y5U9 82 aa8.5□□□□□ -1.05
YBX3-215ENST00000544504 PCNX1Q96RV3 2341 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 IRGMA1A4Y4 181 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 AHRRA9YTQ3 701 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 PRR23D1E9PI22 279 aaPredicted RBP8.49□□□□□ -1.05
YBX3-215ENST00000544504 MS4A18H0YCH9 400 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 ZG16O60844 167 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 OPN1LWP04000 364 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 F13BP05160 661 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 IGFBP1P08833 259 aaPredicted RBP8.49□□□□□ -1.05
YBX3-215ENST00000544504 GNAO1P09471 354 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 PRR23D2P0DMB1 279 aaPredicted RBP8.49□□□□□ -1.05
YBX3-215ENST00000544504 GABRA1P14867 456 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 ACVR2AP27037 513 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 CENPAP49450 140 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 STARP49675 285 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 SUCLG1P53597 346 aaKnown RBP8.49□□□□□ -1.05
YBX3-215ENST00000544504 SLC16A1P53985 500 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 ISL1P61371 349 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 ERVK-25P63136 954 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 LGALS3BPQ08380 585 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 CD47Q08722 323 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 OCLNQ16625 522 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 MS4A18Q3C1V0 323 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 TMEM201Q5SNT2 666 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 ARMC4Q5T2S8 1044 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 Q6ZPB1 254 aaPredicted RBP8.49□□□□□ -1.05
YBX3-215ENST00000544504 SLC35D2Q76EJ3 337 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 FAM122BQ7Z309 247 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 GID4Q8IVV7 300 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 IQCF1Q8N6M8 205 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 ARIH2OSQ8N7S6 290 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 TMEM99Q8N816 258 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 TCEANCQ8N8B7 351 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 ZPLD1Q8TCW7 415 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 FBLIM1Q8WUP2 373 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 FAR1Q8WVX9 515 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 WDYHV1Q96HA8 205 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 RNF122Q9H9V4 155 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 GLRX2Q9NS18 164 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 KLHL9Q9P2J3 617 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 SPRR3Q9UBC9 169 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 IL20RAQ9UHF4 553 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 RNF6Q9Y252 685 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 TPRKBQ9Y3C4 175 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 KLF2Q9Y5W3 355 aaPredicted RBP8.49□□□□□ -1.05
YBX3-215ENST00000544504 LIPGQ9Y5X9 500 aa8.49□□□□□ -1.05
YBX3-215ENST00000544504 NCKAP5O14513 1909 aa8.48□□□□□ -1.05
YBX3-215ENST00000544504 FREM3P0C091 2139 aa8.48□□□□□ -1.05
YBX3-215ENST00000544504 TEX13CA0A0J9YWL9 993 aa8.48□□□□□ -1.05
YBX3-215ENST00000544504 FIGNL2A6NMB9 653 aa8.48□□□□□ -1.05
YBX3-215ENST00000544504 ZNF726A6NNF4 738 aa8.48□□□□□ -1.05
YBX3-215ENST00000544504 SMAD9O15198 467 aaKnown RBP8.48□□□□□ -1.05
YBX3-215ENST00000544504 TLX2O43763 284 aaPredicted RBP8.48□□□□□ -1.05
YBX3-215ENST00000544504 CYTIPO60759 359 aa8.48□□□□□ -1.05
YBX3-215ENST00000544504 WDR1O75083 606 aa8.48□□□□□ -1.05
YBX3-215ENST00000544504 TNFAIP8O95379 198 aa8.48□□□□□ -1.05
YBX3-215ENST00000544504 CLIC3O95833 236 aa8.48□□□□□ -1.05
YBX3-215ENST00000544504 CCDC159P0C7I6 412 aa8.48□□□□□ -1.05
YBX3-215ENST00000544504 PTGS2P35354 604 aa8.48□□□□□ -1.05
YBX3-215ENST00000544504 CHN2P52757 468 aa8.48□□□□□ -1.05
YBX3-215ENST00000544504 BLVRAP53004 296 aa8.48□□□□□ -1.05
YBX3-215ENST00000544504 EFNB1P98172 346 aa8.48□□□□□ -1.05
YBX3-215ENST00000544504 POU3F1Q03052 451 aaPredicted RBP8.48□□□□□ -1.05
YBX3-215ENST00000544504 SRYQ05066 204 aa8.48□□□□□ -1.05
YBX3-215ENST00000544504 RBPJQ06330 500 aa8.48□□□□□ -1.05
YBX3-215ENST00000544504 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.48□□□□□ -1.05
YBX3-215ENST00000544504 CDK5R2Q13319 367 aa8.48□□□□□ -1.05
YBX3-215ENST00000544504 ITGADQ13349 1161 aa8.48□□□□□ -1.05
YBX3-215ENST00000544504 KRR1Q13601 381 aaKnown RBP8.48□□□□□ -1.05
YBX3-215ENST00000544504 ACKR1Q16570 336 aa8.48□□□□□ -1.05
YBX3-215ENST00000544504 GXYLT1Q4G148 440 aa8.48□□□□□ -1.05
YBX3-215ENST00000544504 C6orf141Q5SZD1 244 aa8.48□□□□□ -1.05
YBX3-215ENST00000544504 SLC35F1Q5T1Q4 408 aa8.48□□□□□ -1.05
YBX3-215ENST00000544504 LCN1P1Q5VSP4 162 aa8.48□□□□□ -1.05
YBX3-215ENST00000544504 NXNL2Q5VZ03 156 aa8.48□□□□□ -1.05
YBX3-215ENST00000544504 ZNF324BQ6AW86 544 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms