RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 CAMK2GQ13555 558 aaPredicted RBP11.54□□□□□ -0.56
DDX55-206ENST00000539934 PWP1Q13610 501 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 CPSF6Q16630 551 aaKnown RBP eCLIP11.54□□□□□ -0.56
DDX55-206ENST00000539934 ZXDCQ2QGD7 858 aaPredicted RBP11.54□□□□□ -0.56
DDX55-206ENST00000539934 TMEM107Q6UX40 140 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 HACD2Q6Y1H2 254 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 HMGB4Q8WW32 186 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 ROPN1LQ96C74 230 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 ZNF354BQ96LW1 612 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 HOPXQ9BPY8 73 aaPredicted RBP11.54□□□□□ -0.56
DDX55-206ENST00000539934 SOX17Q9H6I2 414 aaPredicted RBP11.54□□□□□ -0.56
DDX55-206ENST00000539934 METTL7AQ9H8H3 244 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 GAR1Q9NY12 217 aaKnown RBP11.54□□□□□ -0.56
DDX55-206ENST00000539934 IL17BQ9UHF5 180 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 ADAM18Q9Y3Q7 739 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 MYO18BQ8IUG5 2567 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 DOCK9Q9BZ29 2069 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 A0A1W2PRV1 198 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 C9orf172C9J069 976 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 CLIC1O00299 241 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 PCCBP05166 539 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 RPLP0P05388 317 aaKnown RBP11.54□□□□□ -0.56
DDX55-206ENST00000539934 EPORP19235 508 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 EFNA1P20827 205 aaPredicted RBP11.54□□□□□ -0.56
DDX55-206ENST00000539934 PSMB10P40306 273 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 MNDAP41218 407 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 TNFRSF4P43489 277 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 BDKRB1P46663 353 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 MRPL19P49406 292 aaKnown RBP11.54□□□□□ -0.56
DDX55-206ENST00000539934 PTTG1IPP53801 180 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 WNT4P56705 351 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 UFM1P61960 85 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 RPL38P63173 70 aaKnown RBP11.54□□□□□ -0.56
DDX55-206ENST00000539934 NPRL3Q12980 569 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 ENPP2Q13822 863 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 NUMA1Q14980 2115 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 KLHL22Q53GT1 634 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.54□□□□□ -0.56
DDX55-206ENST00000539934 PLAC9Q5JTB6 97 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 AGBL4Q5VU57 503 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 CDPF1Q6NVV7 123 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 FAM198BQ6UWH4 519 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 DPY19L2P2Q6ZN68 376 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 GRINAQ7Z429 371 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 OR5M8Q8NGP6 311 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 NUBPLQ8TB37 319 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 FOXN4Q96NZ1 517 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 NIPSNAP1Q9BPW8 284 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 VPS25Q9BRG1 176 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 JAM3Q9BX67 310 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 PCED1AQ9H1Q7 454 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 IL1RL2Q9HB29 575 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 CALML5Q9NZT1 146 aa11.54□□□□□ -0.56
DDX55-206ENST00000539934 A0A1W2PP55 124 aa11.53□□□□□ -0.56
DDX55-206ENST00000539934 IGLON5A6NGN9 336 aa11.53□□□□□ -0.56
DDX55-206ENST00000539934 H7C417 338 aa11.53□□□□□ -0.56
DDX55-206ENST00000539934 MANBAO00462 879 aa11.53□□□□□ -0.56
DDX55-206ENST00000539934 CD2P06729 351 aa11.53□□□□□ -0.56
DDX55-206ENST00000539934 RGS8P57771 180 aaPredicted RBP11.53□□□□□ -0.56
DDX55-206ENST00000539934 HMGCS1Q01581 520 aa11.53□□□□□ -0.56
DDX55-206ENST00000539934 PLEKHN1Q494U1 663 aaPredicted RBP11.53□□□□□ -0.56
DDX55-206ENST00000539934 C10orf91Q5T1B1 145 aa11.53□□□□□ -0.56
DDX55-206ENST00000539934 DOK6Q6PKX4 331 aa11.53□□□□□ -0.56
DDX55-206ENST00000539934 TEX37Q96LM6 180 aa11.53□□□□□ -0.56
DDX55-206ENST00000539934 MUS81Q96NY9 551 aa11.53□□□□□ -0.56
DDX55-206ENST00000539934 WDFY2Q96P53 400 aa11.53□□□□□ -0.56
DDX55-206ENST00000539934 C7orf50Q9BRJ6 194 aaKnown RBP11.53□□□□□ -0.56
DDX55-206ENST00000539934 PNO1Q9NRX1 252 aaKnown RBP11.53□□□□□ -0.56
DDX55-206ENST00000539934 CARHSP1Q9Y2V2 147 aaKnown RBP11.53□□□□□ -0.56
DDX55-206ENST00000539934 RAXQ9Y2V3 346 aa11.53□□□□□ -0.56
DDX55-206ENST00000539934 ZNF462Q96JM2 2506 aa11.53□□□□□ -0.56
DDX55-206ENST00000539934 TMEM200CA6NKL6 621 aa11.52□□□□□ -0.56
DDX55-206ENST00000539934 TLX3O43711 291 aaPredicted RBP11.52□□□□□ -0.56
DDX55-206ENST00000539934 SRMP19623 302 aa11.52□□□□□ -0.56
DDX55-206ENST00000539934 S100A7P31151 101 aa11.52□□□□□ -0.56
DDX55-206ENST00000539934 MAS1LP35410 378 aa11.52□□□□□ -0.56
DDX55-206ENST00000539934 KIR2DL1P43626 348 aaPredicted RBP11.52□□□□□ -0.56
DDX55-206ENST00000539934 PPT1P50897 306 aa11.52□□□□□ -0.56
DDX55-206ENST00000539934 POLR2JP52435 117 aaKnown RBP11.52□□□□□ -0.56
DDX55-206ENST00000539934 DLX5P56178 289 aa11.52□□□□□ -0.56
DDX55-206ENST00000539934 VSX2P58304 361 aaPredicted RBP11.52□□□□□ -0.56
DDX55-206ENST00000539934 TAS2R38P59533 333 aa11.52□□□□□ -0.56
DDX55-206ENST00000539934 PFN3P60673 137 aa11.52□□□□□ -0.56
DDX55-206ENST00000539934 RCAN2Q14206 197 aa11.52□□□□□ -0.56
DDX55-206ENST00000539934 OPCMLQ14982 345 aa11.52□□□□□ -0.56
DDX55-206ENST00000539934 GGTA1PQ4G0N0 100 aa11.52□□□□□ -0.56
DDX55-206ENST00000539934 RFTN2Q52LD8 501 aaPredicted RBP11.52□□□□□ -0.56
DDX55-206ENST00000539934 PRAMEF8Q5VWM4 474 aa11.52□□□□□ -0.56
DDX55-206ENST00000539934 PRAMEF7Q5VXH5 474 aa11.52□□□□□ -0.56
DDX55-206ENST00000539934 ZNF776Q68DI1 518 aaPredicted RBP11.52□□□□□ -0.56
DDX55-206ENST00000539934 BICRALQ6AI39 1079 aa11.52□□□□□ -0.56
DDX55-206ENST00000539934 MRM1Q6IN84 353 aaKnown RBP11.52□□□□□ -0.56
DDX55-206ENST00000539934 AGTRAPQ6RW13 159 aa11.52□□□□□ -0.56
DDX55-206ENST00000539934 WDR88Q6ZMY6 472 aa11.52□□□□□ -0.56
DDX55-206ENST00000539934 SSX7Q7RTT5 188 aa11.52□□□□□ -0.56
DDX55-206ENST00000539934 TERB2Q8NHR7 220 aa11.52□□□□□ -0.56
DDX55-206ENST00000539934 OTUB1Q96FW1 271 aaPredicted RBP11.52□□□□□ -0.56
DDX55-206ENST00000539934 SAMD8Q96LT4 415 aa11.52□□□□□ -0.56
DDX55-206ENST00000539934 RDH12Q96NR8 316 aa11.52□□□□□ -0.56
DDX55-206ENST00000539934 PRO1933Q9H354 126 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms