RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 HIST1H2ACQ93077 130 aa13.25□□□□□ -0.29
UBE3B-211ENST00000539843 MSI2Q96DH6 328 aaKnown RBP13.25□□□□□ -0.29
UBE3B-211ENST00000539843 SLC41A3Q96GZ6 507 aa13.25□□□□□ -0.29
UBE3B-211ENST00000539843 MCHR1Q99705 422 aa13.25□□□□□ -0.29
UBE3B-211ENST00000539843 EBF4Q9BQW3 602 aa13.25□□□□□ -0.29
UBE3B-211ENST00000539843 EMC6Q9BV81 110 aa13.25□□□□□ -0.29
UBE3B-211ENST00000539843 PRR14Q9BWN1 585 aa13.25□□□□□ -0.29
UBE3B-211ENST00000539843 MS4A5Q9H3V2 200 aa13.25□□□□□ -0.29
UBE3B-211ENST00000539843 NOX3Q9HBY0 568 aa13.25□□□□□ -0.29
UBE3B-211ENST00000539843 SLCO1B3Q9NPD5 702 aa13.25□□□□□ -0.29
UBE3B-211ENST00000539843 SLAMF8Q9P0V8 285 aa13.25□□□□□ -0.29
UBE3B-211ENST00000539843 NDUFAF1Q9Y375 327 aa13.25□□□□□ -0.29
UBE3B-211ENST00000539843 RTTNQ86VV8 2226 aa13.24□□□□□ -0.29
UBE3B-211ENST00000539843 CHP2O43745 196 aa13.24□□□□□ -0.29
UBE3B-211ENST00000539843 TPST1O60507 370 aa13.24□□□□□ -0.29
UBE3B-211ENST00000539843 FARS2O95363 451 aaKnown RBP13.24□□□□□ -0.29
UBE3B-211ENST00000539843 HLA-HP01893 362 aa13.24□□□□□ -0.29
UBE3B-211ENST00000539843 BGLAPP02818 100 aa13.24□□□□□ -0.29
UBE3B-211ENST00000539843 ADORA3P0DMS8 318 aa13.24□□□□□ -0.29
UBE3B-211ENST00000539843 IFNGR1P15260 489 aa13.24□□□□□ -0.29
UBE3B-211ENST00000539843 B4GALT1P15291 398 aa13.24□□□□□ -0.29
UBE3B-211ENST00000539843 PTDSS1P48651 473 aaKnown RBP13.24□□□□□ -0.29
UBE3B-211ENST00000539843 EVX1P49640 407 aa13.24□□□□□ -0.29
UBE3B-211ENST00000539843 CDH12P55289 794 aa13.24□□□□□ -0.29
UBE3B-211ENST00000539843 SELENOVP59797 346 aa13.24□□□□□ -0.29
UBE3B-211ENST00000539843 HGFACQ04756 655 aa13.24□□□□□ -0.29
UBE3B-211ENST00000539843 CAMK2DQ13557 499 aa13.24□□□□□ -0.29
UBE3B-211ENST00000539843 LIPNQ5VXI9 398 aa13.24□□□□□ -0.29
UBE3B-211ENST00000539843 TTC33Q6PID6 262 aaPredicted RBP13.24□□□□□ -0.29
UBE3B-211ENST00000539843 PATL1Q86TB9 770 aaKnown RBP13.24□□□□□ -0.29
UBE3B-211ENST00000539843 SMYD1Q8NB12 490 aa13.24□□□□□ -0.29
UBE3B-211ENST00000539843 UBASH3BQ8TF42 649 aa13.24□□□□□ -0.29
UBE3B-211ENST00000539843 ATP6V1G3Q96LB4 118 aa13.24□□□□□ -0.29
UBE3B-211ENST00000539843 DOK1Q99704 481 aa13.24□□□□□ -0.29
UBE3B-211ENST00000539843 FOXB1Q99853 325 aa13.24□□□□□ -0.29
UBE3B-211ENST00000539843 SEC61A2Q9H9S3 476 aa13.24□□□□□ -0.29
UBE3B-211ENST00000539843 MED29Q9NX70 200 aa13.24□□□□□ -0.29
UBE3B-211ENST00000539843 C11orf98E9PRG8 122 aa13.23□□□□□ -0.29
UBE3B-211ENST00000539843 MS4A18H0YCH9 400 aa13.23□□□□□ -0.29
UBE3B-211ENST00000539843 SYNGR3O43761 229 aa13.23□□□□□ -0.29
UBE3B-211ENST00000539843 MFN2O95140 757 aa13.23□□□□□ -0.29
UBE3B-211ENST00000539843 ADRA2AP08913 450 aa13.23□□□□□ -0.29
UBE3B-211ENST00000539843 NR4A1P22736 598 aa13.23□□□□□ -0.29
UBE3B-211ENST00000539843 GIFP27352 417 aa13.23□□□□□ -0.29
UBE3B-211ENST00000539843 APEX1P27695 318 aaKnown RBP13.23□□□□□ -0.29
UBE3B-211ENST00000539843 PIGFQ07326 219 aa13.23□□□□□ -0.29
UBE3B-211ENST00000539843 MS4A18Q3C1V0 323 aa13.23□□□□□ -0.29
UBE3B-211ENST00000539843 GLIPR1L2Q4G1C9 344 aa13.23□□□□□ -0.29
UBE3B-211ENST00000539843 PIWIL3Q7Z3Z3 882 aaKnown RBP13.23□□□□□ -0.29
UBE3B-211ENST00000539843 HDDC2Q7Z4H3 204 aa13.23□□□□□ -0.29
UBE3B-211ENST00000539843 ZNF786Q8N393 782 aa13.23□□□□□ -0.29
UBE3B-211ENST00000539843 MRPL24Q96A35 216 aaKnown RBP13.23□□□□□ -0.29
UBE3B-211ENST00000539843 MPP4Q96JB8 637 aa13.23□□□□□ -0.29
UBE3B-211ENST00000539843 SIKE1Q9BRV8 207 aa13.23□□□□□ -0.29
UBE3B-211ENST00000539843 NANSQ9NR45 359 aa13.23□□□□□ -0.29
UBE3B-211ENST00000539843 INTS9Q9NV88 658 aaKnown RBP13.23□□□□□ -0.29
UBE3B-211ENST00000539843 GPR160Q9UJ42 338 aa13.23□□□□□ -0.29
UBE3B-211ENST00000539843 ZNF346Q9UL40 294 aaKnown RBP13.23□□□□□ -0.29
UBE3B-211ENST00000539843 STAB1Q9NY15 2570 aa13.22□□□□□ -0.29
UBE3B-211ENST00000539843 TRBV5-3A0A0A0MS03 114 aa13.22□□□□□ -0.29
UBE3B-211ENST00000539843 SLC22A23A1A5C7 686 aa13.22□□□□□ -0.29
UBE3B-211ENST00000539843 CPSF4LA6NMK7 179 aaKnown RBP13.22□□□□□ -0.29
UBE3B-211ENST00000539843 PLPP3O14495 311 aa13.22□□□□□ -0.29
UBE3B-211ENST00000539843 RNF13O43567 381 aa13.22□□□□□ -0.29
UBE3B-211ENST00000539843 HPRP00739 348 aa13.22□□□□□ -0.29
UBE3B-211ENST00000539843 UMPSP11172 480 aa13.22□□□□□ -0.29
UBE3B-211ENST00000539843 HLA-DOBP13765 273 aa13.22□□□□□ -0.29
UBE3B-211ENST00000539843 GLRXP35754 106 aa13.22□□□□□ -0.29
UBE3B-211ENST00000539843 SRP14P37108 136 aaKnown RBP13.22□□□□□ -0.29
UBE3B-211ENST00000539843 GIPRP48546 466 aa13.22□□□□□ -0.29
UBE3B-211ENST00000539843 BIDP55957 195 aa13.22□□□□□ -0.29
UBE3B-211ENST00000539843 RAB1AP62820 205 aa13.22□□□□□ -0.29
UBE3B-211ENST00000539843 NFYCQ13952 458 aa13.22□□□□□ -0.29
UBE3B-211ENST00000539843 RUNDC3AQ59EK9 446 aa13.22□□□□□ -0.29
UBE3B-211ENST00000539843 ZNF627Q7L945 461 aa13.22□□□□□ -0.29
UBE3B-211ENST00000539843 DPPA2Q7Z7J5 298 aa13.22□□□□□ -0.29
UBE3B-211ENST00000539843 CDK20Q8IZL9 346 aa13.22□□□□□ -0.29
UBE3B-211ENST00000539843 ARIH2OSQ8N7S6 290 aa13.22□□□□□ -0.29
UBE3B-211ENST00000539843 LINC01356Q8N9X3 169 aa13.22□□□□□ -0.29
UBE3B-211ENST00000539843 STON2Q8WXE9 905 aa13.22□□□□□ -0.29
UBE3B-211ENST00000539843 ZNF566Q969W8 418 aa13.22□□□□□ -0.29
UBE3B-211ENST00000539843 ZNF837Q96EG3 531 aaPredicted RBP13.22□□□□□ -0.29
UBE3B-211ENST00000539843 MOGAT1Q96PD6 335 aa13.22□□□□□ -0.29
UBE3B-211ENST00000539843 CGREF1Q99674 301 aa13.22□□□□□ -0.29
UBE3B-211ENST00000539843 CPPED1Q9BRF8 314 aaPredicted RBP13.22□□□□□ -0.29
UBE3B-211ENST00000539843 LRMDAQ9H2I8 198 aa13.22□□□□□ -0.29
UBE3B-211ENST00000539843 C1orf198Q9H425 327 aa13.22□□□□□ -0.29
UBE3B-211ENST00000539843 MRGBPQ9NV56 204 aa13.22□□□□□ -0.29
UBE3B-211ENST00000539843 REV1Q9UBZ9 1251 aa13.22□□□□□ -0.29
UBE3B-211ENST00000539843 SLC7A8Q9UHI5 535 aa13.22□□□□□ -0.29
UBE3B-211ENST00000539843 FBN3Q75N90 2809 aa13.21□□□□□ -0.29
UBE3B-211ENST00000539843 A0A1W2PPW3 197 aa13.21□□□□□ -0.29
UBE3B-211ENST00000539843 M0QX08 132 aa13.21□□□□□ -0.29
UBE3B-211ENST00000539843 M0R3H8 397 aa13.21□□□□□ -0.29
UBE3B-211ENST00000539843 PTHP01270 115 aa13.21□□□□□ -0.29
UBE3B-211ENST00000539843 OPN1SWP03999 348 aa13.21□□□□□ -0.29
UBE3B-211ENST00000539843 TACSTD2P09758 323 aa13.21□□□□□ -0.29
UBE3B-211ENST00000539843 CD247P20963 164 aa13.21□□□□□ -0.29
UBE3B-211ENST00000539843 SCGB2A2Q13296 93 aa13.21□□□□□ -0.29
UBE3B-211ENST00000539843 CR1LQ2VPA4 569 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms