RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 NR4A1P22736 598 aa10.79□□□□□ -0.68
VAMP1-206ENST00000538970 SLC6A2P23975 617 aa10.79□□□□□ -0.68
VAMP1-206ENST00000538970 CHN2P52757 468 aa10.79□□□□□ -0.68
VAMP1-206ENST00000538970 CDH12P55289 794 aa10.79□□□□□ -0.68
VAMP1-206ENST00000538970 PUDPQ08623 228 aa10.79□□□□□ -0.68
VAMP1-206ENST00000538970 PMS2P3Q13401 168 aa10.79□□□□□ -0.68
VAMP1-206ENST00000538970 RIN1Q13671 783 aa10.79□□□□□ -0.68
VAMP1-206ENST00000538970 MSMPQ1L6U9 139 aa10.79□□□□□ -0.68
VAMP1-206ENST00000538970 CR1LQ2VPA4 569 aa10.79□□□□□ -0.68
VAMP1-206ENST00000538970 ZNF813Q6ZN06 617 aa10.79□□□□□ -0.68
VAMP1-206ENST00000538970 RANBP3LQ86VV4 465 aaPredicted RBP10.79□□□□□ -0.68
VAMP1-206ENST00000538970 ARMC8Q8IUR7 673 aa10.79□□□□□ -0.68
VAMP1-206ENST00000538970 HIPK4Q8NE63 616 aa10.79□□□□□ -0.68
VAMP1-206ENST00000538970 BHLHE22Q8NFJ8 381 aaPredicted RBP10.79□□□□□ -0.68
VAMP1-206ENST00000538970 HPS1Q92902 700 aa10.79□□□□□ -0.68
VAMP1-206ENST00000538970 MRPL24Q96A35 216 aaKnown RBP10.79□□□□□ -0.68
VAMP1-206ENST00000538970 MS4A3Q96HJ5 214 aa10.79□□□□□ -0.68
VAMP1-206ENST00000538970 TXNDC15Q96J42 360 aa10.79□□□□□ -0.68
VAMP1-206ENST00000538970 ZNF607Q96SK3 696 aa10.79□□□□□ -0.68
VAMP1-206ENST00000538970 CPPED1Q9BRF8 314 aaPredicted RBP10.79□□□□□ -0.68
VAMP1-206ENST00000538970 TMEM43Q9BTV4 400 aa10.79□□□□□ -0.68
VAMP1-206ENST00000538970 MRPL37Q9BZE1 423 aaKnown RBP10.79□□□□□ -0.68
VAMP1-206ENST00000538970 ULBP2Q9BZM5 246 aa10.79□□□□□ -0.68
VAMP1-206ENST00000538970 TPK1Q9H3S4 243 aa10.79□□□□□ -0.68
VAMP1-206ENST00000538970 EVA1AQ9H8M9 152 aa10.79□□□□□ -0.68
VAMP1-206ENST00000538970 B3GAT2Q9NPZ5 323 aa10.79□□□□□ -0.68
VAMP1-206ENST00000538970 MRPL39Q9NYK5 338 aaKnown RBP10.79□□□□□ -0.68
VAMP1-206ENST00000538970 ZNF224Q9NZL3 707 aa10.79□□□□□ -0.68
VAMP1-206ENST00000538970 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.79□□□□□ -0.68
VAMP1-206ENST00000538970 SLC13A4Q9UKG4 626 aa10.79□□□□□ -0.68
VAMP1-206ENST00000538970 CMAHPQ9Y471 501 aa10.79□□□□□ -0.68
VAMP1-206ENST00000538970 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.78□□□□□ -0.68
VAMP1-206ENST00000538970 PLPP3O14495 311 aa10.78□□□□□ -0.68
VAMP1-206ENST00000538970 SERPINB7O75635 380 aa10.78□□□□□ -0.68
VAMP1-206ENST00000538970 MFN2O95140 757 aa10.78□□□□□ -0.68
VAMP1-206ENST00000538970 ADRA2AP08913 450 aa10.78□□□□□ -0.68
VAMP1-206ENST00000538970 ZNF35P13682 527 aa10.78□□□□□ -0.68
VAMP1-206ENST00000538970 APEX1P27695 318 aaKnown RBP10.78□□□□□ -0.68
VAMP1-206ENST00000538970 ATP4BP51164 291 aa10.78□□□□□ -0.68
VAMP1-206ENST00000538970 AQP5P55064 265 aa10.78□□□□□ -0.68
VAMP1-206ENST00000538970 PCBP3P57721 371 aaKnown RBP10.78□□□□□ -0.68
VAMP1-206ENST00000538970 PIGFQ07326 219 aa10.78□□□□□ -0.68
VAMP1-206ENST00000538970 CAMK2DQ13557 499 aa10.78□□□□□ -0.68
VAMP1-206ENST00000538970 TRIP10Q15642 601 aa10.78□□□□□ -0.68
VAMP1-206ENST00000538970 BEND6Q5SZJ8 279 aaPredicted RBP10.78□□□□□ -0.68
VAMP1-206ENST00000538970 DLEU7Q6UYE1 221 aa10.78□□□□□ -0.68
VAMP1-206ENST00000538970 PXKQ7Z7A4 578 aa10.78□□□□□ -0.68
VAMP1-206ENST00000538970 OR6N1Q8NGY5 312 aa10.78□□□□□ -0.68
VAMP1-206ENST00000538970 LRRC8CQ8TDW0 803 aa10.78□□□□□ -0.68
VAMP1-206ENST00000538970 UBASH3BQ8TF42 649 aa10.78□□□□□ -0.68
VAMP1-206ENST00000538970 SNX18Q96RF0 628 aa10.78□□□□□ -0.68
VAMP1-206ENST00000538970 ARHGDIGQ99819 225 aa10.78□□□□□ -0.68
VAMP1-206ENST00000538970 FOXB1Q99853 325 aa10.78□□□□□ -0.68
VAMP1-206ENST00000538970 ANGPT4Q9Y264 503 aa10.78□□□□□ -0.68
VAMP1-206ENST00000538970 POFUT2Q9Y2G5 429 aa10.78□□□□□ -0.68
VAMP1-206ENST00000538970 ZNF726A6NNF4 738 aa10.77□□□□□ -0.69
VAMP1-206ENST00000538970 EVPLLA8MZ36 301 aa10.77□□□□□ -0.69
VAMP1-206ENST00000538970 LYNX1G3V0Z9 82 aa10.77□□□□□ -0.69
VAMP1-206ENST00000538970 M0R3H8 397 aa10.77□□□□□ -0.69
VAMP1-206ENST00000538970 FMO6PO60774 539 aa10.77□□□□□ -0.69
VAMP1-206ENST00000538970 ERLIN1O75477 346 aa10.77□□□□□ -0.69
VAMP1-206ENST00000538970 SERPINI2O75830 405 aa10.77□□□□□ -0.69
VAMP1-206ENST00000538970 MT-ATP6P00846 226 aa10.77□□□□□ -0.69
VAMP1-206ENST00000538970 LYNX1P0DP58 116 aa10.77□□□□□ -0.69
VAMP1-206ENST00000538970 IFNGR1P15260 489 aa10.77□□□□□ -0.69
VAMP1-206ENST00000538970 AHCYP23526 432 aa10.77□□□□□ -0.69
VAMP1-206ENST00000538970 GLRXP35754 106 aa10.77□□□□□ -0.69
VAMP1-206ENST00000538970 GIPRP48546 466 aa10.77□□□□□ -0.69
VAMP1-206ENST00000538970 PTDSS1P48651 473 aaKnown RBP10.77□□□□□ -0.69
VAMP1-206ENST00000538970 CSNK1A1P48729 337 aa10.77□□□□□ -0.69
VAMP1-206ENST00000538970 EVX1P49640 407 aa10.77□□□□□ -0.69
VAMP1-206ENST00000538970 CDH15P55291 814 aa10.77□□□□□ -0.69
VAMP1-206ENST00000538970 SQLEQ14534 574 aa10.77□□□□□ -0.69
VAMP1-206ENST00000538970 NPTX1Q15818 432 aa10.77□□□□□ -0.69
VAMP1-206ENST00000538970 FXNQ16595 210 aa10.77□□□□□ -0.69
VAMP1-206ENST00000538970 AGKQ53H12 422 aa10.77□□□□□ -0.69
VAMP1-206ENST00000538970 AGBL2Q5U5Z8 902 aa10.77□□□□□ -0.69
VAMP1-206ENST00000538970 ZNF613Q6PF04 617 aa10.77□□□□□ -0.69
VAMP1-206ENST00000538970 LINC00114Q6XXX2 140 aa10.77□□□□□ -0.69
VAMP1-206ENST00000538970 SNX32Q86XE0 403 aa10.77□□□□□ -0.69
VAMP1-206ENST00000538970 PTOV1Q86YD1 416 aa10.77□□□□□ -0.69
VAMP1-206ENST00000538970 C10orf53Q8N6V4 93 aa10.77□□□□□ -0.69
VAMP1-206ENST00000538970 LINC01356Q8N9X3 169 aa10.77□□□□□ -0.69
VAMP1-206ENST00000538970 SMYD1Q8NB12 490 aa10.77□□□□□ -0.69
VAMP1-206ENST00000538970 OR5J2Q8NH18 312 aa10.77□□□□□ -0.69
VAMP1-206ENST00000538970 C1orf159Q96HA4 380 aa10.77□□□□□ -0.69
VAMP1-206ENST00000538970 MCHR1Q99705 422 aa10.77□□□□□ -0.69
VAMP1-206ENST00000538970 DENND2DQ9H6A0 471 aaPredicted RBP10.77□□□□□ -0.69
VAMP1-206ENST00000538970 M0R233 179 aa10.76□□□□□ -0.69
VAMP1-206ENST00000538970 CHP2O43745 196 aa10.76□□□□□ -0.69
VAMP1-206ENST00000538970 SYNGR3O43761 229 aa10.76□□□□□ -0.69
VAMP1-206ENST00000538970 UBL3O95164 117 aa10.76□□□□□ -0.69
VAMP1-206ENST00000538970 RAB36O95755 333 aa10.76□□□□□ -0.69
VAMP1-206ENST00000538970 OPN1SWP03999 348 aa10.76□□□□□ -0.69
VAMP1-206ENST00000538970 ADORA3P0DMS8 318 aa10.76□□□□□ -0.69
VAMP1-206ENST00000538970 BIDP55957 195 aa10.76□□□□□ -0.69
VAMP1-206ENST00000538970 RAB1AP62820 205 aa10.76□□□□□ -0.69
VAMP1-206ENST00000538970 TRMT5Q32P41 509 aaKnown RBP10.76□□□□□ -0.69
VAMP1-206ENST00000538970 RUNDC3AQ59EK9 446 aa10.76□□□□□ -0.69
VAMP1-206ENST00000538970 WDR88Q6ZMY6 472 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms