RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 MCHR1Q99705 422 aa11.38□□□□□ -0.59
RTN3-207ENST00000536011 REPIN1Q9BWE0 567 aaKnown RBP11.38□□□□□ -0.59
RTN3-207ENST00000536011 ULBP2Q9BZM5 246 aa11.38□□□□□ -0.59
RTN3-207ENST00000536011 MRGBPQ9NV56 204 aa11.38□□□□□ -0.59
RTN3-207ENST00000536011 SVEP1Q4LDE5 3571 aa11.37□□□□□ -0.59
RTN3-207ENST00000536011 SLC35F4A4IF30 521 aa11.37□□□□□ -0.59
RTN3-207ENST00000536011 MS4A18H0YCH9 400 aa11.37□□□□□ -0.59
RTN3-207ENST00000536011 LMX1BO60663 402 aa11.37□□□□□ -0.59
RTN3-207ENST00000536011 RAB36O95755 333 aa11.37□□□□□ -0.59
RTN3-207ENST00000536011 CELA3BP08861 270 aa11.37□□□□□ -0.59
RTN3-207ENST00000536011 CD79AP11912 226 aa11.37□□□□□ -0.59
RTN3-207ENST00000536011 AHCYP23526 432 aa11.37□□□□□ -0.59
RTN3-207ENST00000536011 THBS4P35443 961 aa11.37□□□□□ -0.59
RTN3-207ENST00000536011 CSNK1A1P48729 337 aa11.37□□□□□ -0.59
RTN3-207ENST00000536011 PCBP3P57721 371 aaKnown RBP11.37□□□□□ -0.59
RTN3-207ENST00000536011 RPS23P62266 143 aaKnown RBP11.37□□□□□ -0.59
RTN3-207ENST00000536011 HGFACQ04756 655 aa11.37□□□□□ -0.59
RTN3-207ENST00000536011 SNTB2Q13425 540 aaKnown RBP11.37□□□□□ -0.59
RTN3-207ENST00000536011 TRMT5Q32P41 509 aaKnown RBP11.37□□□□□ -0.59
RTN3-207ENST00000536011 MS4A18Q3C1V0 323 aa11.37□□□□□ -0.59
RTN3-207ENST00000536011 RUNDC3AQ59EK9 446 aa11.37□□□□□ -0.59
RTN3-207ENST00000536011 SPATA21Q7Z572 469 aa11.37□□□□□ -0.59
RTN3-207ENST00000536011 ANKS4BQ8N8V4 417 aa11.37□□□□□ -0.59
RTN3-207ENST00000536011 SMYD1Q8NB12 490 aa11.37□□□□□ -0.59
RTN3-207ENST00000536011 OR5J2Q8NH18 312 aa11.37□□□□□ -0.59
RTN3-207ENST00000536011 SLC26A7Q8TE54 656 aa11.37□□□□□ -0.59
RTN3-207ENST00000536011 KCTD12Q96CX2 325 aaKnown RBP11.37□□□□□ -0.59
RTN3-207ENST00000536011 MAGEB18Q96M61 343 aa11.37□□□□□ -0.59
RTN3-207ENST00000536011 MOGAT1Q96PD6 335 aa11.37□□□□□ -0.59
RTN3-207ENST00000536011 CGREF1Q99674 301 aa11.37□□□□□ -0.59
RTN3-207ENST00000536011 ARHGDIGQ99819 225 aa11.37□□□□□ -0.59
RTN3-207ENST00000536011 PRR14Q9BWN1 585 aa11.37□□□□□ -0.59
RTN3-207ENST00000536011 SLC19A3Q9BZV2 496 aa11.37□□□□□ -0.59
RTN3-207ENST00000536011 NOX3Q9HBY0 568 aa11.37□□□□□ -0.59
RTN3-207ENST00000536011 CMAHPQ9Y471 501 aa11.37□□□□□ -0.59
RTN3-207ENST00000536011 RTTNQ86VV8 2226 aa11.36□□□□□ -0.59
RTN3-207ENST00000536011 LOC100289279A0A1B0GTE1 492 aa11.36□□□□□ -0.59
RTN3-207ENST00000536011 M0R3H8 397 aa11.36□□□□□ -0.59
RTN3-207ENST00000536011 PLPP3O14495 311 aa11.36□□□□□ -0.59
RTN3-207ENST00000536011 SEC14L2O76054 403 aa11.36□□□□□ -0.59
RTN3-207ENST00000536011 UBL3O95164 117 aa11.36□□□□□ -0.59
RTN3-207ENST00000536011 HPRP00739 348 aa11.36□□□□□ -0.59
RTN3-207ENST00000536011 HLA-HP01893 362 aa11.36□□□□□ -0.59
RTN3-207ENST00000536011 ADORA3P0DMS8 318 aa11.36□□□□□ -0.59
RTN3-207ENST00000536011 HLA-DOBP13765 273 aa11.36□□□□□ -0.59
RTN3-207ENST00000536011 DAOP14920 347 aa11.36□□□□□ -0.59
RTN3-207ENST00000536011 ZNF23P17027 643 aa11.36□□□□□ -0.59
RTN3-207ENST00000536011 SRD5A1P18405 259 aa11.36□□□□□ -0.59
RTN3-207ENST00000536011 THBS2P35442 1172 aa11.36□□□□□ -0.59
RTN3-207ENST00000536011 EVX1P49640 407 aa11.36□□□□□ -0.59
RTN3-207ENST00000536011 GALK2Q01415 458 aa11.36□□□□□ -0.59
RTN3-207ENST00000536011 CAMK2DQ13557 499 aa11.36□□□□□ -0.59
RTN3-207ENST00000536011 NFYCQ13952 458 aa11.36□□□□□ -0.59
RTN3-207ENST00000536011 TTMPQ5BVD1 217 aa11.36□□□□□ -0.59
RTN3-207ENST00000536011 REP15Q6BDI9 236 aa11.36□□□□□ -0.59
RTN3-207ENST00000536011 TTC33Q6PID6 262 aaPredicted RBP11.36□□□□□ -0.59
RTN3-207ENST00000536011 UGT2A3Q6UWM9 527 aa11.36□□□□□ -0.59
RTN3-207ENST00000536011 PTOV1Q86YD1 416 aa11.36□□□□□ -0.59
RTN3-207ENST00000536011 SVOPLQ8N434 492 aa11.36□□□□□ -0.59
RTN3-207ENST00000536011 CKAP2Q8WWK9 683 aa11.36□□□□□ -0.59
RTN3-207ENST00000536011 ZNF837Q96EG3 531 aaPredicted RBP11.36□□□□□ -0.59
RTN3-207ENST00000536011 MPP4Q96JB8 637 aa11.36□□□□□ -0.59
RTN3-207ENST00000536011 FOXN4Q96NZ1 517 aa11.36□□□□□ -0.59
RTN3-207ENST00000536011 EMC6Q9BV81 110 aa11.36□□□□□ -0.59
RTN3-207ENST00000536011 RSPO3Q9BXY4 272 aaPredicted RBP11.36□□□□□ -0.59
RTN3-207ENST00000536011 SEC61A2Q9H9S3 476 aa11.36□□□□□ -0.59
RTN3-207ENST00000536011 NANSQ9NR45 359 aa11.36□□□□□ -0.59
RTN3-207ENST00000536011 ARGLU1Q9NWB6 273 aaPredicted RBP11.36□□□□□ -0.59
RTN3-207ENST00000536011 MED29Q9NX70 200 aa11.36□□□□□ -0.59
RTN3-207ENST00000536011 TRAPPC13A5PLN9 417 aa11.35□□□□□ -0.59
RTN3-207ENST00000536011 SERPINI2O75830 405 aa11.35□□□□□ -0.59
RTN3-207ENST00000536011 HIST1H2ABP04908 130 aa11.35□□□□□ -0.59
RTN3-207ENST00000536011 B4GALT1P15291 398 aa11.35□□□□□ -0.59
RTN3-207ENST00000536011 NR4A1P22736 598 aa11.35□□□□□ -0.59
RTN3-207ENST00000536011 GIFP27352 417 aa11.35□□□□□ -0.59
RTN3-207ENST00000536011 PCGF2P35227 344 aa11.35□□□□□ -0.59
RTN3-207ENST00000536011 CHN2P52757 468 aa11.35□□□□□ -0.59
RTN3-207ENST00000536011 MTPNP58546 118 aa11.35□□□□□ -0.59
RTN3-207ENST00000536011 ENTPD8Q5MY95 495 aa11.35□□□□□ -0.59
RTN3-207ENST00000536011 GKAP1Q5VSY0 366 aaPredicted RBP11.35□□□□□ -0.59
RTN3-207ENST00000536011 METTL21CQ5VZV1 264 aa11.35□□□□□ -0.59
RTN3-207ENST00000536011 KRT80Q6KB66 452 aa11.35□□□□□ -0.59
RTN3-207ENST00000536011 HIST3H2AQ7L7L0 130 aa11.35□□□□□ -0.59
RTN3-207ENST00000536011 HDXQ7Z353 690 aa11.35□□□□□ -0.59
RTN3-207ENST00000536011 PIWIL3Q7Z3Z3 882 aaKnown RBP11.35□□□□□ -0.59
RTN3-207ENST00000536011 HDDC2Q7Z4H3 204 aa11.35□□□□□ -0.59
RTN3-207ENST00000536011 MYPOPQ86VE0 399 aaPredicted RBP11.35□□□□□ -0.59
RTN3-207ENST00000536011 OR6T1Q8NGN1 323 aa11.35□□□□□ -0.59
RTN3-207ENST00000536011 OR6X1Q8NH79 312 aa11.35□□□□□ -0.59
RTN3-207ENST00000536011 ADAMTS16Q8TE57 1224 aa11.35□□□□□ -0.59
RTN3-207ENST00000536011 HIST1H2ACQ93077 130 aa11.35□□□□□ -0.59
RTN3-207ENST00000536011 DOK1Q99704 481 aa11.35□□□□□ -0.59
RTN3-207ENST00000536011 FOXB1Q99853 325 aa11.35□□□□□ -0.59
RTN3-207ENST00000536011 SH3GL1Q99961 368 aa11.35□□□□□ -0.59
RTN3-207ENST00000536011 BPESC1Q9GZL8 116 aa11.35□□□□□ -0.59
RTN3-207ENST00000536011 KAT8Q9H7Z6 458 aaKnown RBP11.35□□□□□ -0.59
RTN3-207ENST00000536011 VIPAS39Q9H9C1 493 aa11.35□□□□□ -0.59
RTN3-207ENST00000536011 B3GNT2Q9NY97 397 aa11.35□□□□□ -0.59
RTN3-207ENST00000536011 ZNF229Q9UJW7 825 aa11.35□□□□□ -0.59
RTN3-207ENST00000536011 IGHV4-61A0A0C4DH41 118 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms