RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 MAP2K6P52564 334 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 C1DQ13901 141 aaKnown RBP11.09□□□□□ -0.63
SCARB1-204ENST00000535005 TRAM2Q15035 370 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 TAB1Q15750 504 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 ALG10BQ5I7T1 473 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 RNFT1Q5M7Z0 435 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 DDI2Q5TDH0 399 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 LCN1P1Q5VSP4 162 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 ZNF782Q6ZMW2 699 aaPredicted RBP11.09□□□□□ -0.63
SCARB1-204ENST00000535005 ANKK1Q8NFD2 765 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 ENKURQ8TC29 256 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 POC1BQ8TC44 478 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 SLC25A46Q96AG3 418 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 PRSS27Q9BQR3 290 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 FUZQ9BT04 418 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 ZNF426Q9BUY5 554 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 SLC25A18Q9H1K4 315 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 ZDHHC11Q9H8X9 412 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 SLC25A19Q9HC21 320 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 RANGRFQ9HD47 186 aaPredicted RBP11.09□□□□□ -0.63
SCARB1-204ENST00000535005 CTPS2Q9NRF8 586 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 PTTG3PQ9NZH4 202 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 VDAC3Q9Y277 283 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 A0A087WUJ7 227 aa11.08□□□□□ -0.64
SCARB1-204ENST00000535005 NOS1APO75052 506 aaPredicted RBP11.08□□□□□ -0.64
SCARB1-204ENST00000535005 GADD45GO95257 159 aa11.08□□□□□ -0.64
SCARB1-204ENST00000535005 CBLP22681 906 aa11.08□□□□□ -0.64
SCARB1-204ENST00000535005 RPS19P39019 145 aaKnown RBP11.08□□□□□ -0.64
SCARB1-204ENST00000535005 RFC3P40938 356 aa11.08□□□□□ -0.64
SCARB1-204ENST00000535005 NUDT6P53370 316 aa11.08□□□□□ -0.64
SCARB1-204ENST00000535005 B3GALT5-AS1P59052 145 aa11.08□□□□□ -0.64
SCARB1-204ENST00000535005 FOXF1Q12946 379 aa11.08□□□□□ -0.64
SCARB1-204ENST00000535005 BAK1Q16611 211 aa11.08□□□□□ -0.64
SCARB1-204ENST00000535005 SOWAHCQ53LP3 525 aaPredicted RBP11.08□□□□□ -0.64
SCARB1-204ENST00000535005 PLET1Q6UQ28 207 aa11.08□□□□□ -0.64
SCARB1-204ENST00000535005 PCSK4Q6UW60 755 aa11.08□□□□□ -0.64
SCARB1-204ENST00000535005 ADGRG3Q86Y34 549 aa11.08□□□□□ -0.64
SCARB1-204ENST00000535005 IQCF2Q8IXL9 164 aa11.08□□□□□ -0.64
SCARB1-204ENST00000535005 Q8NA96 180 aa11.08□□□□□ -0.64
SCARB1-204ENST00000535005 DUSP18Q8NEJ0 188 aa11.08□□□□□ -0.64
SCARB1-204ENST00000535005 PROKR2Q8NFJ6 384 aa11.08□□□□□ -0.64
SCARB1-204ENST00000535005 SLC39A7Q92504 469 aa11.08□□□□□ -0.64
SCARB1-204ENST00000535005 TAAR6Q96RI8 345 aa11.08□□□□□ -0.64
SCARB1-204ENST00000535005 ARPC5LQ9BPX5 153 aa11.08□□□□□ -0.64
SCARB1-204ENST00000535005 BARHL1Q9BZE3 327 aa11.08□□□□□ -0.64
SCARB1-204ENST00000535005 ISYNA1Q9NPH2 558 aa11.08□□□□□ -0.64
SCARB1-204ENST00000535005 RHCGQ9UBD6 479 aa11.08□□□□□ -0.64
SCARB1-204ENST00000535005 SLC7A7Q9UM01 511 aa11.08□□□□□ -0.64
SCARB1-204ENST00000535005 TMED7-TICAM2A0A0A6YYA0 188 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 IRGMA1A4Y4 181 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 FAM166BA8MTA8 275 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 LINC01387J3KSC0 135 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 WISP1O95388 367 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 GAAP10253 952 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 FKBP2P26885 142 aaKnown RBP11.07□□□□□ -0.64
SCARB1-204ENST00000535005 RBM34P42696 430 aaKnown RBP11.07□□□□□ -0.64
SCARB1-204ENST00000535005 MAGEA5P43359 124 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 PMP22Q01453 160 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 SPIBQ01892 262 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 RIN1Q13671 783 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 SLC10A1Q14973 349 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 SPHARQ15513 63 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 FAM131AQ6UXB0 335 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 LSM14AQ8ND56 463 aaKnown RBP11.07□□□□□ -0.64
SCARB1-204ENST00000535005 ACOT11Q8WXI4 607 aaPredicted RBP11.07□□□□□ -0.64
SCARB1-204ENST00000535005 TMEM80Q96HE8 168 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 HS6ST2Q96MM7 605 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 OR5M11Q96RB7 305 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 NPAS1Q99742 590 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 PIGQQ9BRB3 760 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 TMEM43Q9BTV4 400 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 PLSCR3Q9NRY6 295 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 NUFIP1Q9UHK0 495 aaKnown RBP11.07□□□□□ -0.64
SCARB1-204ENST00000535005 TMED7Q9Y3B3 224 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 RPL36Q9Y3U8 105 aaKnown RBP11.07□□□□□ -0.64
SCARB1-204ENST00000535005 SPTA1P02549 2419 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 OR2M5A3KFT3 312 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 FABP12A6NFH5 140 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 ZNF208O43345 1280 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 EFNA2O43921 213 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 SLC43A1O75387 559 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 TRAPPC6AO75865 159 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 ADAP00813 363 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 IGHG3P01860 377 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 CRYABP02511 175 aaKnown RBP11.07□□□□□ -0.64
SCARB1-204ENST00000535005 CSF3P09919 207 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 CXCR1P25024 350 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 CRYBB2P43320 205 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 MAP2K3P46734 347 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 SLC9A3P48764 834 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 CRISP1P54107 249 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 PPP3R1P63098 170 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 FOXK1P85037 733 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 KLRB1Q12918 225 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 WDR88Q6ZMY6 472 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 PTCHD4Q6ZW05 846 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 YRDCQ86U90 279 aaKnown RBP11.07□□□□□ -0.64
SCARB1-204ENST00000535005 NKAIN4Q8IVV8 208 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 SIAH3Q8IW03 269 aa11.07□□□□□ -0.64
SCARB1-204ENST00000535005 LAX1Q8IWV1 398 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms