RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 CCDC80Q76M96 950 aa16.3■□□□□ 0.2
NDUFS3-213ENST00000534716 WDFY1Q8IWB7 410 aa16.3■□□□□ 0.2
NDUFS3-213ENST00000534716 THOC1Q96FV9 657 aaKnown RBP16.3■□□□□ 0.2
NDUFS3-213ENST00000534716 MPP4Q96JB8 637 aa16.3■□□□□ 0.2
NDUFS3-213ENST00000534716 DOK1Q99704 481 aa16.3■□□□□ 0.2
NDUFS3-213ENST00000534716 PIMREGQ9BSJ6 248 aa16.3■□□□□ 0.2
NDUFS3-213ENST00000534716 SLC19A3Q9BZV2 496 aa16.3■□□□□ 0.2
NDUFS3-213ENST00000534716 NPHS2Q9NP85 383 aa16.3■□□□□ 0.2
NDUFS3-213ENST00000534716 ALPK2Q86TB3 2170 aa16.3■□□□□ 0.2
NDUFS3-213ENST00000534716 HEATR1Q9H583 2144 aaKnown RBP16.3■□□□□ 0.2
NDUFS3-213ENST00000534716 TMEM129A0AVI4 362 aa16.29■□□□□ 0.2
NDUFS3-213ENST00000534716 ZNF726A6NNF4 738 aa16.29■□□□□ 0.2
NDUFS3-213ENST00000534716 OPN1SWP03999 348 aa16.29■□□□□ 0.2
NDUFS3-213ENST00000534716 H2AFXP16104 143 aaPredicted RBP16.29■□□□□ 0.2
NDUFS3-213ENST00000534716 ZNF14P17017 642 aaPredicted RBP16.29■□□□□ 0.2
NDUFS3-213ENST00000534716 NPR2P20594 1047 aa16.29■□□□□ 0.2
NDUFS3-213ENST00000534716 CAMK2DQ13557 499 aa16.29■□□□□ 0.2
NDUFS3-213ENST00000534716 ZNF74Q16587 644 aa16.29■□□□□ 0.2
NDUFS3-213ENST00000534716 GSG1Q2KHT4 349 aa16.29■□□□□ 0.2
NDUFS3-213ENST00000534716 INTS11Q5TA45 600 aaKnown RBP16.29■□□□□ 0.2
NDUFS3-213ENST00000534716 CARD17Q5XLA6 110 aa16.29■□□□□ 0.2
NDUFS3-213ENST00000534716 VHLLQ6RSH7 139 aa16.29■□□□□ 0.2
NDUFS3-213ENST00000534716 WDR88Q6ZMY6 472 aa16.29■□□□□ 0.2
NDUFS3-213ENST00000534716 C10orf53Q8N6V4 93 aa16.29■□□□□ 0.2
NDUFS3-213ENST00000534716 ZNF540Q8NDQ6 660 aa16.29■□□□□ 0.2
NDUFS3-213ENST00000534716 OR4D11Q8NGI4 311 aa16.29■□□□□ 0.2
NDUFS3-213ENST00000534716 OR6X1Q8NH79 312 aa16.29■□□□□ 0.2
NDUFS3-213ENST00000534716 ADAMTS16Q8TE57 1224 aa16.29■□□□□ 0.2
NDUFS3-213ENST00000534716 RASSF5Q8WWW0 418 aa16.29■□□□□ 0.2
NDUFS3-213ENST00000534716 VRK1Q99986 396 aaPredicted RBP16.29■□□□□ 0.2
NDUFS3-213ENST00000534716 RAB1BQ9H0U4 201 aa16.29■□□□□ 0.2
NDUFS3-213ENST00000534716 MRGBPQ9NV56 204 aa16.29■□□□□ 0.2
NDUFS3-213ENST00000534716 TAS2R5Q9NYW4 299 aa16.29■□□□□ 0.2
NDUFS3-213ENST00000534716 ZNF224Q9NZL3 707 aa16.29■□□□□ 0.2
NDUFS3-213ENST00000534716 TRAPPC13A5PLN9 417 aa16.28■□□□□ 0.2
NDUFS3-213ENST00000534716 CPSF4LA6NMK7 179 aaKnown RBP16.28■□□□□ 0.2
NDUFS3-213ENST00000534716 hCG_2039718K7EN88 272 aa16.28■□□□□ 0.2
NDUFS3-213ENST00000534716 SEC14L2O76054 403 aa16.28■□□□□ 0.2
NDUFS3-213ENST00000534716 HLA-HP01893 362 aa16.28■□□□□ 0.2
NDUFS3-213ENST00000534716 FAM157CP0CG43 387 aa16.28■□□□□ 0.2
NDUFS3-213ENST00000534716 ADORA3P0DMS8 318 aa16.28■□□□□ 0.2
NDUFS3-213ENST00000534716 NR4A1P22736 598 aa16.28■□□□□ 0.2
NDUFS3-213ENST00000534716 AHCYP23526 432 aa16.28■□□□□ 0.2
NDUFS3-213ENST00000534716 CAPZA2P47755 286 aa16.28■□□□□ 0.2
NDUFS3-213ENST00000534716 EVX1P49640 407 aa16.28■□□□□ 0.2
NDUFS3-213ENST00000534716 GZMKP49863 264 aa16.28■□□□□ 0.2
NDUFS3-213ENST00000534716 CRYBA2P53672 197 aa16.28■□□□□ 0.2
NDUFS3-213ENST00000534716 NPRL3Q12980 569 aa16.28■□□□□ 0.2
NDUFS3-213ENST00000534716 DAG1Q14118 895 aa16.28■□□□□ 0.2
NDUFS3-213ENST00000534716 VMACQ2NL98 169 aa16.28■□□□□ 0.2
NDUFS3-213ENST00000534716 TTC33Q6PID6 262 aaPredicted RBP16.28■□□□□ 0.2
NDUFS3-213ENST00000534716 ZNF813Q6ZN06 617 aa16.28■□□□□ 0.2
NDUFS3-213ENST00000534716 TSPYL5Q86VY4 417 aaPredicted RBP16.28■□□□□ 0.2
NDUFS3-213ENST00000534716 RBM45Q8IUH3 476 aaKnown RBP16.28■□□□□ 0.2
NDUFS3-213ENST00000534716 ANKS4BQ8N8V4 417 aa16.28■□□□□ 0.2
NDUFS3-213ENST00000534716 OR10A6Q8NH74 314 aa16.28■□□□□ 0.2
NDUFS3-213ENST00000534716 TMEM54Q969K7 222 aa16.28■□□□□ 0.2
NDUFS3-213ENST00000534716 TAMM41Q96BW9 452 aa16.28■□□□□ 0.2
NDUFS3-213ENST00000534716 FOXN4Q96NZ1 517 aa16.28■□□□□ 0.2
NDUFS3-213ENST00000534716 KCNK17Q96T54 332 aa16.28■□□□□ 0.2
NDUFS3-213ENST00000534716 FOXB1Q99853 325 aa16.28■□□□□ 0.2
NDUFS3-213ENST00000534716 ULBP2Q9BZM5 246 aa16.28■□□□□ 0.2
NDUFS3-213ENST00000534716 NOX3Q9HBY0 568 aa16.28■□□□□ 0.2
NDUFS3-213ENST00000534716 ARGLU1Q9NWB6 273 aaPredicted RBP16.28■□□□□ 0.2
NDUFS3-213ENST00000534716 LPAR3Q9UBY5 353 aa16.28■□□□□ 0.2
NDUFS3-213ENST00000534716 ZNF229Q9UJW7 825 aa16.28■□□□□ 0.2
NDUFS3-213ENST00000534716 POFUT2Q9Y2G5 429 aa16.28■□□□□ 0.2
NDUFS3-213ENST00000534716 ARFGEF3Q5TH69 2177 aa16.27■□□□□ 0.2
NDUFS3-213ENST00000534716 A0A0G2JND7 137 aa16.27■□□□□ 0.2
NDUFS3-213ENST00000534716 FBP2O00757 339 aa16.27■□□□□ 0.2
NDUFS3-213ENST00000534716 ZNF35P13682 527 aa16.27■□□□□ 0.2
NDUFS3-213ENST00000534716 GIFP27352 417 aa16.27■□□□□ 0.2
NDUFS3-213ENST00000534716 CSNK1A1P48729 337 aa16.27■□□□□ 0.2
NDUFS3-213ENST00000534716 CYLC2Q14093 348 aaPredicted RBP16.27■□□□□ 0.2
NDUFS3-213ENST00000534716 TRMT5Q32P41 509 aaKnown RBP16.27■□□□□ 0.2
NDUFS3-213ENST00000534716 COQ5Q5HYK3 327 aa16.27■□□□□ 0.2
NDUFS3-213ENST00000534716 NANOGP8Q6NSW7 305 aa16.27■□□□□ 0.2
NDUFS3-213ENST00000534716 PIWIL3Q7Z3Z3 882 aaKnown RBP16.27■□□□□ 0.2
NDUFS3-213ENST00000534716 OR6N1Q8NGY5 312 aa16.27■□□□□ 0.2
NDUFS3-213ENST00000534716 NEU4Q8WWR8 484 aaPredicted RBP16.27■□□□□ 0.2
NDUFS3-213ENST00000534716 SH3GL1Q99961 368 aa16.27■□□□□ 0.2
NDUFS3-213ENST00000534716 NANOGQ9H9S0 305 aa16.27■□□□□ 0.2
NDUFS3-213ENST00000534716 NANSQ9NR45 359 aa16.27■□□□□ 0.2
NDUFS3-213ENST00000534716 FBXL3Q9UKT7 428 aa16.27■□□□□ 0.2
NDUFS3-213ENST00000534716 SLC7A7Q9UM01 511 aa16.27■□□□□ 0.2
NDUFS3-213ENST00000534716 STAB1Q9NY15 2570 aa16.26■□□□□ 0.19
NDUFS3-213ENST00000534716 OR6A2O95222 327 aa16.26■□□□□ 0.19
NDUFS3-213ENST00000534716 NPPAP01160 153 aa16.26■□□□□ 0.19
NDUFS3-213ENST00000534716 IGF2P01344 180 aa16.26■□□□□ 0.19
NDUFS3-213ENST00000534716 ERCC1P07992 297 aaPredicted RBP16.26■□□□□ 0.19
NDUFS3-213ENST00000534716 IGFBP1P08833 259 aaPredicted RBP16.26■□□□□ 0.19
NDUFS3-213ENST00000534716 ASAH2BP0C7U1 165 aa16.26■□□□□ 0.19
NDUFS3-213ENST00000534716 CD79AP11912 226 aa16.26■□□□□ 0.19
NDUFS3-213ENST00000534716 IFNGR1P15260 489 aa16.26■□□□□ 0.19
NDUFS3-213ENST00000534716 BIDP55957 195 aa16.26■□□□□ 0.19
NDUFS3-213ENST00000534716 CALHM3Q86XJ0 350 aa16.26■□□□□ 0.19
NDUFS3-213ENST00000534716 OR8J3Q8NGG0 315 aa16.26■□□□□ 0.19
NDUFS3-213ENST00000534716 PRSS27Q9BQR3 290 aa16.26■□□□□ 0.19
NDUFS3-213ENST00000534716 POLR2J2Q9GZM3 115 aaKnown RBP16.26■□□□□ 0.19
NDUFS3-213ENST00000534716 POLR2J3Q9H1A7 115 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms