RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 HPRP00739 348 aa10.37□□□□□ -0.75
SVIP-205ENST00000533774 CCL2P13500 99 aa10.37□□□□□ -0.75
SVIP-205ENST00000533774 HLA-DOBP13765 273 aa10.37□□□□□ -0.75
SVIP-205ENST00000533774 SELEP16581 610 aa10.37□□□□□ -0.75
SVIP-205ENST00000533774 PRPS1L1P21108 318 aa10.37□□□□□ -0.75
SVIP-205ENST00000533774 GLO1Q04760 184 aa10.37□□□□□ -0.75
SVIP-205ENST00000533774 MFSD13AQ14CX5 517 aa10.37□□□□□ -0.75
SVIP-205ENST00000533774 MAPK11Q15759 364 aa10.37□□□□□ -0.75
SVIP-205ENST00000533774 GSTA3Q16772 222 aa10.37□□□□□ -0.75
SVIP-205ENST00000533774 PCGF3Q3KNV8 242 aa10.37□□□□□ -0.75
SVIP-205ENST00000533774 MMEL1Q495T6 779 aa10.37□□□□□ -0.75
SVIP-205ENST00000533774 ANKRD46Q86W74 232 aa10.37□□□□□ -0.75
SVIP-205ENST00000533774 TREML1Q86YW5 311 aa10.37□□□□□ -0.75
SVIP-205ENST00000533774 C20orf196Q8IYI0 205 aa10.37□□□□□ -0.75
SVIP-205ENST00000533774 CADM2Q8N3J6 435 aa10.37□□□□□ -0.75
SVIP-205ENST00000533774 OR4A15Q8NGL6 344 aa10.37□□□□□ -0.75
SVIP-205ENST00000533774 MFSD8Q8NHS3 518 aa10.37□□□□□ -0.75
SVIP-205ENST00000533774 FAM110DQ8TAY7 271 aaPredicted RBP10.37□□□□□ -0.75
SVIP-205ENST00000533774 UBE2FQ969M7 185 aa10.37□□□□□ -0.75
SVIP-205ENST00000533774 EMC6Q9BV81 110 aa10.37□□□□□ -0.75
SVIP-205ENST00000533774 MS4A7Q9GZW8 240 aaPredicted RBP10.37□□□□□ -0.75
SVIP-205ENST00000533774 BEX1Q9HBH7 125 aa10.37□□□□□ -0.75
SVIP-205ENST00000533774 NPHS2Q9NP85 383 aa10.37□□□□□ -0.75
SVIP-205ENST00000533774 TESQ9UGI8 421 aaKnown RBP10.37□□□□□ -0.75
SVIP-205ENST00000533774 DCDC2Q9UHG0 476 aa10.37□□□□□ -0.75
SVIP-205ENST00000533774 SLC7A8Q9UHI5 535 aa10.37□□□□□ -0.75
SVIP-205ENST00000533774 NOTCH3Q9UM47 2321 aa10.37□□□□□ -0.75
SVIP-205ENST00000533774 POLR3KQ9Y2Y1 108 aaPredicted RBP10.37□□□□□ -0.75
SVIP-205ENST00000533774 A0A1B0GUS0 222 aa10.36□□□□□ -0.75
SVIP-205ENST00000533774 ISPDA4D126 451 aa10.36□□□□□ -0.75
SVIP-205ENST00000533774 SLC22A31A6NKX4 558 aa10.36□□□□□ -0.75
SVIP-205ENST00000533774 G3V4G9 280 aa10.36□□□□□ -0.75
SVIP-205ENST00000533774 FZD7O75084 574 aa10.36□□□□□ -0.75
SVIP-205ENST00000533774 FOXH1O75593 365 aa10.36□□□□□ -0.75
SVIP-205ENST00000533774 UBOX5O94941 541 aa10.36□□□□□ -0.75
SVIP-205ENST00000533774 G6PDP11413 515 aa10.36□□□□□ -0.75
SVIP-205ENST00000533774 CPA3P15088 417 aa10.36□□□□□ -0.75
SVIP-205ENST00000533774 MAPK1P28482 360 aa10.36□□□□□ -0.75
SVIP-205ENST00000533774 CD80P33681 288 aa10.36□□□□□ -0.75
SVIP-205ENST00000533774 RPS5P46782 204 aaKnown RBP10.36□□□□□ -0.75
SVIP-205ENST00000533774 KLF3P57682 345 aaPredicted RBP10.36□□□□□ -0.75
SVIP-205ENST00000533774 TEKQ02763 1124 aa10.36□□□□□ -0.75
SVIP-205ENST00000533774 HFEQ30201 348 aa10.36□□□□□ -0.75
SVIP-205ENST00000533774 ATG16L1Q676U5 607 aa10.36□□□□□ -0.75
SVIP-205ENST00000533774 NHLRC1Q6VVB1 395 aa10.36□□□□□ -0.75
SVIP-205ENST00000533774 C9orf139Q6ZV77 190 aa10.36□□□□□ -0.75
SVIP-205ENST00000533774 ZNF572Q7Z3I7 529 aaPredicted RBP10.36□□□□□ -0.75
SVIP-205ENST00000533774 VRK2Q86Y07 508 aa10.36□□□□□ -0.75
SVIP-205ENST00000533774 C10orf107Q8IVU9 208 aa10.36□□□□□ -0.75
SVIP-205ENST00000533774 PIK3C3Q8NEB9 887 aa10.36□□□□□ -0.75
SVIP-205ENST00000533774 SYNPRQ8TBG9 265 aa10.36□□□□□ -0.75
SVIP-205ENST00000533774 MGARPQ8TDB4 240 aa10.36□□□□□ -0.75
SVIP-205ENST00000533774 CCL17Q92583 94 aa10.36□□□□□ -0.75
SVIP-205ENST00000533774 TRIM44Q96DX7 344 aaPredicted RBP10.36□□□□□ -0.75
SVIP-205ENST00000533774 TIMD4Q96H15 378 aa10.36□□□□□ -0.75
SVIP-205ENST00000533774 PPP3R2Q96LZ3 170 aa10.36□□□□□ -0.75
SVIP-205ENST00000533774 ZFAND3Q9H8U3 227 aa10.36□□□□□ -0.75
SVIP-205ENST00000533774 SAP30LQ9HAJ7 183 aa10.36□□□□□ -0.75
SVIP-205ENST00000533774 TNFRSF19Q9NS68 423 aa10.36□□□□□ -0.75
SVIP-205ENST00000533774 TBK1Q9UHD2 729 aa10.36□□□□□ -0.75
SVIP-205ENST00000533774 CHST2Q9Y4C5 530 aa10.36□□□□□ -0.75
SVIP-205ENST00000533774 CLPSL1A2RUU4 121 aa10.35□□□□□ -0.75
SVIP-205ENST00000533774 MS4A18H0YCH9 400 aa10.35□□□□□ -0.75
SVIP-205ENST00000533774 M0R082 166 aa10.35□□□□□ -0.75
SVIP-205ENST00000533774 RNASET2O00584 256 aaKnown RBP10.35□□□□□ -0.75
SVIP-205ENST00000533774 TPD52L2O43399 206 aaKnown RBP10.35□□□□□ -0.75
SVIP-205ENST00000533774 GLRA3O75311 464 aa10.35□□□□□ -0.75
SVIP-205ENST00000533774 CPSF4O95639 269 aaKnown RBP10.35□□□□□ -0.75
SVIP-205ENST00000533774 RAB36O95755 333 aa10.35□□□□□ -0.75
SVIP-205ENST00000533774 AGR2O95994 175 aa10.35□□□□□ -0.75
SVIP-205ENST00000533774 CHEK2O96017 543 aa10.35□□□□□ -0.75
SVIP-205ENST00000533774 PLATP00750 562 aa10.35□□□□□ -0.75
SVIP-205ENST00000533774 NGFP01138 241 aa10.35□□□□□ -0.75
SVIP-205ENST00000533774 IGHV1-46P01743 117 aa10.35□□□□□ -0.75
SVIP-205ENST00000533774 IGHV2-70P01814 119 aa10.35□□□□□ -0.75
SVIP-205ENST00000533774 IGHMP01871 453 aa10.35□□□□□ -0.75
SVIP-205ENST00000533774 SERPINA5P05154 406 aa10.35□□□□□ -0.75
SVIP-205ENST00000533774 FGF4P08620 206 aa10.35□□□□□ -0.75
SVIP-205ENST00000533774 OR8G3PP0DMU2 310 aa10.35□□□□□ -0.75
SVIP-205ENST00000533774 VSIG8P0DPA2 414 aa10.35□□□□□ -0.75
SVIP-205ENST00000533774 UQCRC2P22695 453 aa10.35□□□□□ -0.75
SVIP-205ENST00000533774 ARRB2P32121 409 aa10.35□□□□□ -0.75
SVIP-205ENST00000533774 SMCPP49901 116 aaPredicted RBP10.35□□□□□ -0.75
SVIP-205ENST00000533774 PAX8Q06710 450 aa10.35□□□□□ -0.75
SVIP-205ENST00000533774 TAF9Q16594 264 aa10.35□□□□□ -0.75
SVIP-205ENST00000533774 DEFB112Q30KQ8 113 aa10.35□□□□□ -0.75
SVIP-205ENST00000533774 MS4A18Q3C1V0 323 aa10.35□□□□□ -0.75
SVIP-205ENST00000533774 WBP2NLQ6ICG8 309 aa10.35□□□□□ -0.75
SVIP-205ENST00000533774 FIP1L1Q6UN15 594 aaKnown RBP10.35□□□□□ -0.75
SVIP-205ENST00000533774 ZNF836Q6ZNA1 936 aa10.35□□□□□ -0.75
SVIP-205ENST00000533774 RNF130Q86XS8 419 aa10.35□□□□□ -0.75
SVIP-205ENST00000533774 SKA3Q8IX90 412 aa10.35□□□□□ -0.75
SVIP-205ENST00000533774 PARP8Q8N3A8 854 aa10.35□□□□□ -0.75
SVIP-205ENST00000533774 FNDC5Q8NAU1 212 aa10.35□□□□□ -0.75
SVIP-205ENST00000533774 NOA1Q8NC60 698 aaKnown RBP10.35□□□□□ -0.75
SVIP-205ENST00000533774 OR4F5Q8NH21 305 aa10.35□□□□□ -0.75
SVIP-205ENST00000533774 ZNF417Q8TAU3 575 aa10.35□□□□□ -0.75
SVIP-205ENST00000533774 STK35Q8TDR2 534 aa10.35□□□□□ -0.75
SVIP-205ENST00000533774 ST7LQ8TDW4 575 aa10.35□□□□□ -0.75
SVIP-205ENST00000533774 SNX33Q8WV41 574 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms