RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 MTPNP58546 118 aa10.76□□□□□ -0.69
CAPRIN1-213ENST00000533562 HGFACQ04756 655 aa10.76□□□□□ -0.69
CAPRIN1-213ENST00000533562 NFYCQ13952 458 aa10.76□□□□□ -0.69
CAPRIN1-213ENST00000533562 CARTPTQ16568 116 aa10.76□□□□□ -0.69
CAPRIN1-213ENST00000533562 INTS11Q5TA45 600 aaKnown RBP10.76□□□□□ -0.69
CAPRIN1-213ENST00000533562 LINC00114Q6XXX2 140 aa10.76□□□□□ -0.69
CAPRIN1-213ENST00000533562 MDP1Q86V88 176 aa10.76□□□□□ -0.69
CAPRIN1-213ENST00000533562 OR5J2Q8NH18 312 aa10.76□□□□□ -0.69
CAPRIN1-213ENST00000533562 RASSF5Q8WWW0 418 aa10.76□□□□□ -0.69
CAPRIN1-213ENST00000533562 TXNDC15Q96J42 360 aa10.76□□□□□ -0.69
CAPRIN1-213ENST00000533562 FOXN4Q96NZ1 517 aa10.76□□□□□ -0.69
CAPRIN1-213ENST00000533562 MOGAT1Q96PD6 335 aa10.76□□□□□ -0.69
CAPRIN1-213ENST00000533562 ARHGDIGQ99819 225 aa10.76□□□□□ -0.69
CAPRIN1-213ENST00000533562 WFDC6Q9BQY6 131 aa10.76□□□□□ -0.69
CAPRIN1-213ENST00000533562 DENND2DQ9H6A0 471 aaPredicted RBP10.76□□□□□ -0.69
CAPRIN1-213ENST00000533562 KAT8Q9H7Z6 458 aaKnown RBP10.76□□□□□ -0.69
CAPRIN1-213ENST00000533562 VIPAS39Q9H9C1 493 aa10.76□□□□□ -0.69
CAPRIN1-213ENST00000533562 NPHS2Q9NP85 383 aa10.76□□□□□ -0.69
CAPRIN1-213ENST00000533562 MED29Q9NX70 200 aa10.76□□□□□ -0.69
CAPRIN1-213ENST00000533562 SPEF1Q9Y4P9 236 aa10.76□□□□□ -0.69
CAPRIN1-213ENST00000533562 IGHV2OR16-5A0A0B4J2B6 119 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 A0A0G2JND7 137 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 VWC2LB2RUY7 222 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 hCG_2039718K7EN88 272 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 M0R3H8 397 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 ENTPD5O75356 428 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 HLA-HP01893 362 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 HIST1H2ABP04908 130 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 CELA3BP08861 270 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 FAM157CP0CG43 387 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 ADORA3P0DMS8 318 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 IGHV4-31P0DP07 118 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 CAMK2DQ13557 499 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 CYLC2Q14093 348 aaPredicted RBP10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 DAG1Q14118 895 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 GGTLC2Q14390 218 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 GSG1Q2KHT4 349 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 IQCCQ4KMZ1 466 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 ENTPD8Q5MY95 495 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 PHYHD1Q5SRE7 291 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 TTC33Q6PID6 262 aaPredicted RBP10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 NHLRC1Q6VVB1 395 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 ZNF813Q6ZN06 617 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 HIST3H2AQ7L7L0 130 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 ZNF627Q7L945 461 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 SPATA21Q7Z572 469 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 RETREG3Q86VR2 466 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 ANKS4BQ8N8V4 417 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 OR6T1Q8NGN1 323 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 OR10A6Q8NH74 314 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 NEU4Q8WWR8 484 aaPredicted RBP10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 HIST1H2ACQ93077 130 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 MPP4Q96JB8 637 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 DOK1Q99704 481 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 SH3GL1Q99961 368 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 ULBP2Q9BZM5 246 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 ZNF385DQ9H6B1 395 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 SEC61A2Q9H9S3 476 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 NANSQ9NR45 359 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 MRGBPQ9NV56 204 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 B3GNT2Q9NY97 397 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 LPAR3Q9UBY5 353 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 CMAHPQ9Y471 501 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 CUBNO60494 3623 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.75□□□□□ -0.697e-6■□□□□ 9.3
CAPRIN1-213ENST00000533562 MALRD1Q5VYJ5 2156 aa10.75□□□□□ -0.69
CAPRIN1-213ENST00000533562 FBN3Q75N90 2809 aa10.74□□□□□ -0.69
CAPRIN1-213ENST00000533562 TRAPPC13A5PLN9 417 aa10.74□□□□□ -0.69
CAPRIN1-213ENST00000533562 ZNF503-AS2A6NEH8 195 aa10.74□□□□□ -0.69
CAPRIN1-213ENST00000533562 CPSF4LA6NMK7 179 aaKnown RBP10.74□□□□□ -0.69
CAPRIN1-213ENST00000533562 LRRN3E7EW58 273 aa10.74□□□□□ -0.69
CAPRIN1-213ENST00000533562 C11orf98E9PRG8 122 aa10.74□□□□□ -0.69
CAPRIN1-213ENST00000533562 LMX1BO60663 402 aa10.74□□□□□ -0.69
CAPRIN1-213ENST00000533562 EDF1O60869 148 aaKnown RBP10.74□□□□□ -0.69
CAPRIN1-213ENST00000533562 SERPINI2O75830 405 aa10.74□□□□□ -0.69
CAPRIN1-213ENST00000533562 SEC14L2O76054 403 aa10.74□□□□□ -0.69
CAPRIN1-213ENST00000533562 CH25HO95992 272 aa10.74□□□□□ -0.69
CAPRIN1-213ENST00000533562 OPN1SWP03999 348 aa10.74□□□□□ -0.69
CAPRIN1-213ENST00000533562 IFNGR1P15260 489 aa10.74□□□□□ -0.69
CAPRIN1-213ENST00000533562 NR4A1P22736 598 aa10.74□□□□□ -0.69
CAPRIN1-213ENST00000533562 PCGF2P35227 344 aa10.74□□□□□ -0.69
CAPRIN1-213ENST00000533562 CSNK1A1P48729 337 aa10.74□□□□□ -0.69
CAPRIN1-213ENST00000533562 BIDP55957 195 aa10.74□□□□□ -0.69
CAPRIN1-213ENST00000533562 PIGFQ07326 219 aa10.74□□□□□ -0.69
CAPRIN1-213ENST00000533562 ZP4Q12836 540 aa10.74□□□□□ -0.69
CAPRIN1-213ENST00000533562 SELPLGQ14242 412 aa10.74□□□□□ -0.69
CAPRIN1-213ENST00000533562 TRMT5Q32P41 509 aaKnown RBP10.74□□□□□ -0.69
CAPRIN1-213ENST00000533562 PIWIL3Q7Z3Z3 882 aaKnown RBP10.74□□□□□ -0.69
CAPRIN1-213ENST00000533562 MYPOPQ86VE0 399 aaPredicted RBP10.74□□□□□ -0.69
CAPRIN1-213ENST00000533562 GPR32P1Q8NGA4 272 aa10.74□□□□□ -0.69
CAPRIN1-213ENST00000533562 OR6X1Q8NH79 312 aa10.74□□□□□ -0.69
CAPRIN1-213ENST00000533562 ADAMTS16Q8TE57 1224 aa10.74□□□□□ -0.69
CAPRIN1-213ENST00000533562 FOXB1Q99853 325 aa10.74□□□□□ -0.69
CAPRIN1-213ENST00000533562 SLC19A3Q9BZV2 496 aa10.74□□□□□ -0.69
CAPRIN1-213ENST00000533562 SHARPINQ9H0F6 387 aa10.74□□□□□ -0.69
CAPRIN1-213ENST00000533562 NOX3Q9HBY0 568 aa10.74□□□□□ -0.69
CAPRIN1-213ENST00000533562 FBXL3Q9UKT7 428 aa10.74□□□□□ -0.69
CAPRIN1-213ENST00000533562 LOC100289279A0A1B0GTE1 492 aa10.73□□□□□ -0.69
CAPRIN1-213ENST00000533562 SH3PXD2BA1X283 911 aa10.73□□□□□ -0.69
CAPRIN1-213ENST00000533562 RNF212BA8MTL3 300 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms