RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 MED29Q9NX70 200 aa19.31■□□□□ 0.68
TRAPPC4-210ENST00000531290 ATRQ13535 2644 aa19.31■□□□□ 0.68
TRAPPC4-210ENST00000531290 IGHV2OR16-5A0A0B4J2B6 119 aa19.3■□□□□ 0.68
TRAPPC4-210ENST00000531290 ZNF503-AS2A6NEH8 195 aa19.3■□□□□ 0.68
TRAPPC4-210ENST00000531290 RNF212BA8MTL3 300 aa19.3■□□□□ 0.68
TRAPPC4-210ENST00000531290 VWC2LB2RUY7 222 aa19.3■□□□□ 0.68
TRAPPC4-210ENST00000531290 LRRN3E7EW58 273 aa19.3■□□□□ 0.68
TRAPPC4-210ENST00000531290 PLPP3O14495 311 aa19.3■□□□□ 0.68
TRAPPC4-210ENST00000531290 SERPINI2O75830 405 aa19.3■□□□□ 0.68
TRAPPC4-210ENST00000531290 C8BP07358 591 aa19.3■□□□□ 0.68
TRAPPC4-210ENST00000531290 CD79AP11912 226 aa19.3■□□□□ 0.68
TRAPPC4-210ENST00000531290 PCBP3P57721 371 aaKnown RBP19.3■□□□□ 0.68
TRAPPC4-210ENST00000531290 MTPNP58546 118 aa19.3■□□□□ 0.68
TRAPPC4-210ENST00000531290 SF3A3Q12874 501 aaKnown RBP eCLIP19.3■□□□□ 0.68
TRAPPC4-210ENST00000531290 CAMK2DQ13557 499 aa19.3■□□□□ 0.68
TRAPPC4-210ENST00000531290 DUSP7Q16829 419 aa19.3■□□□□ 0.68
TRAPPC4-210ENST00000531290 IQCCQ4KMZ1 466 aa19.3■□□□□ 0.68
TRAPPC4-210ENST00000531290 ZNF813Q6ZN06 617 aa19.3■□□□□ 0.68
TRAPPC4-210ENST00000531290 SPATA21Q7Z572 469 aa19.3■□□□□ 0.68
TRAPPC4-210ENST00000531290 MYPOPQ86VE0 399 aaPredicted RBP19.3■□□□□ 0.68
TRAPPC4-210ENST00000531290 ARHGDIGQ99819 225 aa19.3■□□□□ 0.68
TRAPPC4-210ENST00000531290 ULBP2Q9BZM5 246 aa19.3■□□□□ 0.68
TRAPPC4-210ENST00000531290 LPAR3Q9UBY5 353 aa19.3■□□□□ 0.68
TRAPPC4-210ENST00000531290 LMX1BO60663 402 aa19.29■□□□□ 0.68
TRAPPC4-210ENST00000531290 HLA-HP01893 362 aa19.29■□□□□ 0.68
TRAPPC4-210ENST00000531290 OPN1SWP03999 348 aa19.29■□□□□ 0.68
TRAPPC4-210ENST00000531290 APEHP13798 732 aaKnown RBP19.29■□□□□ 0.68
TRAPPC4-210ENST00000531290 ZNF16P17020 682 aaPredicted RBP19.29■□□□□ 0.68
TRAPPC4-210ENST00000531290 NFYCQ13952 458 aa19.29■□□□□ 0.68
TRAPPC4-210ENST00000531290 DAG1Q14118 895 aa19.29■□□□□ 0.68
TRAPPC4-210ENST00000531290 MAPRE2Q15555 327 aa19.29■□□□□ 0.68
TRAPPC4-210ENST00000531290 GSG1Q2KHT4 349 aa19.29■□□□□ 0.68
TRAPPC4-210ENST00000531290 SLC30A8Q8IWU4 369 aa19.29■□□□□ 0.68
TRAPPC4-210ENST00000531290 SVOPLQ8N434 492 aa19.29■□□□□ 0.68
TRAPPC4-210ENST00000531290 OR6T1Q8NGN1 323 aa19.29■□□□□ 0.68
TRAPPC4-210ENST00000531290 OR5J2Q8NH18 312 aa19.29■□□□□ 0.68
TRAPPC4-210ENST00000531290 DOK1Q99704 481 aa19.29■□□□□ 0.68
TRAPPC4-210ENST00000531290 SHARPINQ9H0F6 387 aa19.29■□□□□ 0.68
TRAPPC4-210ENST00000531290 B3GNT2Q9NY97 397 aa19.29■□□□□ 0.68
TRAPPC4-210ENST00000531290 SH3PXD2BA1X283 911 aa19.28■□□□□ 0.68
TRAPPC4-210ENST00000531290 CPSF4LA6NMK7 179 aaKnown RBP19.28■□□□□ 0.68
TRAPPC4-210ENST00000531290 CHP2O43745 196 aa19.28■□□□□ 0.68
TRAPPC4-210ENST00000531290 ADORA3P0DMS8 318 aa19.28■□□□□ 0.68
TRAPPC4-210ENST00000531290 PIGFQ07326 219 aa19.28■□□□□ 0.68
TRAPPC4-210ENST00000531290 SNTB2Q13425 540 aaKnown RBP19.28■□□□□ 0.68
TRAPPC4-210ENST00000531290 SELPLGQ14242 412 aa19.28■□□□□ 0.68
TRAPPC4-210ENST00000531290 MMEL1Q495T6 779 aa19.28■□□□□ 0.68
TRAPPC4-210ENST00000531290 ENTPD8Q5MY95 495 aa19.28■□□□□ 0.68
TRAPPC4-210ENST00000531290 KRT80Q6KB66 452 aa19.28■□□□□ 0.68
TRAPPC4-210ENST00000531290 TTC33Q6PID6 262 aaPredicted RBP19.28■□□□□ 0.68
TRAPPC4-210ENST00000531290 NHLRC1Q6VVB1 395 aa19.28■□□□□ 0.68
TRAPPC4-210ENST00000531290 LINC00114Q6XXX2 140 aa19.28■□□□□ 0.68
TRAPPC4-210ENST00000531290 PATL1Q86TB9 770 aaKnown RBP19.28■□□□□ 0.68
TRAPPC4-210ENST00000531290 RETREG3Q86VR2 466 aa19.28■□□□□ 0.68
TRAPPC4-210ENST00000531290 SLC26A7Q8TE54 656 aa19.28■□□□□ 0.68
TRAPPC4-210ENST00000531290 NEU4Q8WWR8 484 aaPredicted RBP19.28■□□□□ 0.68
TRAPPC4-210ENST00000531290 NOX3Q9HBY0 568 aa19.28■□□□□ 0.68
TRAPPC4-210ENST00000531290 DYNLRB1Q9NP97 96 aa19.28■□□□□ 0.68
TRAPPC4-210ENST00000531290 KCNS2Q9ULS6 477 aa19.28■□□□□ 0.68
TRAPPC4-210ENST00000531290 CMAHPQ9Y471 501 aa19.28■□□□□ 0.68
TRAPPC4-210ENST00000531290 SPEF1Q9Y4P9 236 aa19.28■□□□□ 0.68
TRAPPC4-210ENST00000531290 COL6A5A8TX70 2615 aa19.27■□□□□ 0.68
TRAPPC4-210ENST00000531290 CR1P17927 2039 aa19.27■□□□□ 0.68
TRAPPC4-210ENST00000531290 LOC100289279A0A1B0GTE1 492 aa19.27■□□□□ 0.68
TRAPPC4-210ENST00000531290 C11orf98E9PRG8 122 aa19.27■□□□□ 0.68
TRAPPC4-210ENST00000531290 CSNK1A1P48729 337 aa19.27■□□□□ 0.68
TRAPPC4-210ENST00000531290 TRMT5Q32P41 509 aaKnown RBP19.27■□□□□ 0.68
TRAPPC4-210ENST00000531290 INTS11Q5TA45 600 aaKnown RBP19.27■□□□□ 0.68
TRAPPC4-210ENST00000531290 FAM166AQ6J272 317 aa19.27■□□□□ 0.68
TRAPPC4-210ENST00000531290 ZNF627Q7L945 461 aa19.27■□□□□ 0.68
TRAPPC4-210ENST00000531290 GPR32P1Q8NGA4 272 aa19.27■□□□□ 0.68
TRAPPC4-210ENST00000531290 VANGL1Q8TAA9 524 aaPredicted RBP19.27■□□□□ 0.68
TRAPPC4-210ENST00000531290 TMEM158Q8WZ71 300 aa19.27■□□□□ 0.68
TRAPPC4-210ENST00000531290 KAT8Q9H7Z6 458 aaKnown RBP19.27■□□□□ 0.68
TRAPPC4-210ENST00000531290 IGHV4-61A0A0C4DH41 118 aa19.26■□□□□ 0.67
TRAPPC4-210ENST00000531290 CH25HO95992 272 aa19.26■□□□□ 0.67
TRAPPC4-210ENST00000531290 HIST1H2ABP04908 130 aa19.26■□□□□ 0.67
TRAPPC4-210ENST00000531290 DAOP14920 347 aa19.26■□□□□ 0.67
TRAPPC4-210ENST00000531290 IFNGR1P15260 489 aa19.26■□□□□ 0.67
TRAPPC4-210ENST00000531290 B4GALT1P15291 398 aa19.26■□□□□ 0.67
TRAPPC4-210ENST00000531290 NR4A1P22736 598 aa19.26■□□□□ 0.67
TRAPPC4-210ENST00000531290 BIDP55957 195 aa19.26■□□□□ 0.67
TRAPPC4-210ENST00000531290 CYLC2Q14093 348 aaPredicted RBP19.26■□□□□ 0.67
TRAPPC4-210ENST00000531290 NPTX1Q15818 432 aa19.26■□□□□ 0.67
TRAPPC4-210ENST00000531290 HIST3H2AQ7L7L0 130 aa19.26■□□□□ 0.67
TRAPPC4-210ENST00000531290 RBM45Q8IUH3 476 aaKnown RBP19.26■□□□□ 0.67
TRAPPC4-210ENST00000531290 ZCCHC24Q8N2G6 241 aaKnown RBP19.26■□□□□ 0.67
TRAPPC4-210ENST00000531290 OR10A6Q8NH74 314 aa19.26■□□□□ 0.67
TRAPPC4-210ENST00000531290 ADAMTS16Q8TE57 1224 aa19.26■□□□□ 0.67
TRAPPC4-210ENST00000531290 HIST1H2ACQ93077 130 aa19.26■□□□□ 0.67
TRAPPC4-210ENST00000531290 FOXB1Q99853 325 aa19.26■□□□□ 0.67
TRAPPC4-210ENST00000531290 BPESC1Q9GZL8 116 aa19.26■□□□□ 0.67
TRAPPC4-210ENST00000531290 DENND2DQ9H6A0 471 aaPredicted RBP19.26■□□□□ 0.67
TRAPPC4-210ENST00000531290 CHD3Q12873 2000 aaKnown RBP19.25■□□□□ 0.67
TRAPPC4-210ENST00000531290 TMEM129A0AVI4 362 aa19.25■□□□□ 0.67
TRAPPC4-210ENST00000531290 TRAPPC13A5PLN9 417 aa19.25■□□□□ 0.67
TRAPPC4-210ENST00000531290 RNF13O43567 381 aa19.25■□□□□ 0.67
TRAPPC4-210ENST00000531290 STAMBPO95630 424 aa19.25■□□□□ 0.67
TRAPPC4-210ENST00000531290 RAB36O95755 333 aa19.25■□□□□ 0.67
TRAPPC4-210ENST00000531290 PTDSS1P48651 473 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms