RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 ARHGDIGQ99819 225 aa13.65□□□□□ -0.22
CPSF1-205ENST00000531042 REPIN1Q9BWE0 567 aaKnown RBP13.65□□□□□ -0.22
CPSF1-205ENST00000531042 BPESC1Q9GZL8 116 aa13.65□□□□□ -0.22
CPSF1-205ENST00000531042 SHARPINQ9H0F6 387 aa13.65□□□□□ -0.22
CPSF1-205ENST00000531042 NOX3Q9HBY0 568 aa13.65□□□□□ -0.22
CPSF1-205ENST00000531042 B3GAT2Q9NPZ5 323 aa13.65□□□□□ -0.22
CPSF1-205ENST00000531042 LOC100289279A0A1B0GTE1 492 aa13.64□□□□□ -0.23
CPSF1-205ENST00000531042 ZNF726A6NNF4 738 aa13.64□□□□□ -0.23
CPSF1-205ENST00000531042 M0QX08 132 aa13.64□□□□□ -0.23
CPSF1-205ENST00000531042 PHF1O43189 567 aaPredicted RBP13.64□□□□□ -0.23
CPSF1-205ENST00000531042 STAMBPO95630 424 aa13.64□□□□□ -0.23
CPSF1-205ENST00000531042 MT-ATP6P00846 226 aa13.64□□□□□ -0.23
CPSF1-205ENST00000531042 C8BP07358 591 aa13.64□□□□□ -0.23
CPSF1-205ENST00000531042 CD79AP11912 226 aa13.64□□□□□ -0.23
CPSF1-205ENST00000531042 APEHP13798 732 aaKnown RBP13.64□□□□□ -0.23
CPSF1-205ENST00000531042 ZNF23P17027 643 aa13.64□□□□□ -0.23
CPSF1-205ENST00000531042 AHCYP23526 432 aa13.64□□□□□ -0.23
CPSF1-205ENST00000531042 IGFBP5P24593 272 aa13.64□□□□□ -0.23
CPSF1-205ENST00000531042 SNTB2Q13425 540 aaKnown RBP13.64□□□□□ -0.23
CPSF1-205ENST00000531042 CAMK2DQ13557 499 aa13.64□□□□□ -0.23
CPSF1-205ENST00000531042 SELPLGQ14242 412 aa13.64□□□□□ -0.23
CPSF1-205ENST00000531042 NPTX1Q15818 432 aa13.64□□□□□ -0.23
CPSF1-205ENST00000531042 GSG1Q2KHT4 349 aa13.64□□□□□ -0.23
CPSF1-205ENST00000531042 KRT80Q6KB66 452 aa13.64□□□□□ -0.23
CPSF1-205ENST00000531042 ZNF813Q6ZN06 617 aa13.64□□□□□ -0.23
CPSF1-205ENST00000531042 RETREG3Q86VR2 466 aa13.64□□□□□ -0.23
CPSF1-205ENST00000531042 ZCCHC24Q8N2G6 241 aaKnown RBP13.64□□□□□ -0.23
CPSF1-205ENST00000531042 GPR32P1Q8NGA4 272 aa13.64□□□□□ -0.23
CPSF1-205ENST00000531042 NEU4Q8WWR8 484 aaPredicted RBP13.64□□□□□ -0.23
CPSF1-205ENST00000531042 ZNF75AQ96N20 296 aa13.64□□□□□ -0.23
CPSF1-205ENST00000531042 ZNF385DQ9H6B1 395 aa13.64□□□□□ -0.23
CPSF1-205ENST00000531042 KCNS2Q9ULS6 477 aa13.64□□□□□ -0.23
CPSF1-205ENST00000531042 POFUT2Q9Y2G5 429 aa13.64□□□□□ -0.23
CPSF1-205ENST00000531042 NDUFAF1Q9Y375 327 aa13.64□□□□□ -0.23
CPSF1-205ENST00000531042 SH3PXD2BA1X283 911 aa13.63□□□□□ -0.23
CPSF1-205ENST00000531042 CHP2O43745 196 aa13.63□□□□□ -0.23
CPSF1-205ENST00000531042 OPN1SWP03999 348 aa13.63□□□□□ -0.23
CPSF1-205ENST00000531042 ERCC1P07992 297 aaPredicted RBP13.63□□□□□ -0.23
CPSF1-205ENST00000531042 IGFBP1P08833 259 aaPredicted RBP13.63□□□□□ -0.23
CPSF1-205ENST00000531042 ADORA3P0DMS8 318 aa13.63□□□□□ -0.23
CPSF1-205ENST00000531042 DAOP14920 347 aa13.63□□□□□ -0.23
CPSF1-205ENST00000531042 ZNF14P17017 642 aaPredicted RBP13.63□□□□□ -0.23
CPSF1-205ENST00000531042 NR4A1P22736 598 aa13.63□□□□□ -0.23
CPSF1-205ENST00000531042 GIFP27352 417 aa13.63□□□□□ -0.23
CPSF1-205ENST00000531042 MTPNP58546 118 aa13.63□□□□□ -0.23
CPSF1-205ENST00000531042 PIGFQ07326 219 aa13.63□□□□□ -0.23
CPSF1-205ENST00000531042 CYP51A1Q16850 503 aa13.63□□□□□ -0.23
CPSF1-205ENST00000531042 ENTPD8Q5MY95 495 aa13.63□□□□□ -0.23
CPSF1-205ENST00000531042 SNX32Q86XE0 403 aa13.63□□□□□ -0.23
CPSF1-205ENST00000531042 CDK20Q8IZL9 346 aa13.63□□□□□ -0.23
CPSF1-205ENST00000531042 OR6T1Q8NGN1 323 aa13.63□□□□□ -0.23
CPSF1-205ENST00000531042 OR6N1Q8NGY5 312 aa13.63□□□□□ -0.23
CPSF1-205ENST00000531042 OR5J2Q8NH18 312 aa13.63□□□□□ -0.23
CPSF1-205ENST00000531042 CKAP2Q8WWK9 683 aa13.63□□□□□ -0.23
CPSF1-205ENST00000531042 THOC1Q96FV9 657 aaKnown RBP13.63□□□□□ -0.23
CPSF1-205ENST00000531042 MS4A3Q96HJ5 214 aa13.63□□□□□ -0.23
CPSF1-205ENST00000531042 CGREF1Q99674 301 aa13.63□□□□□ -0.23
CPSF1-205ENST00000531042 FOXB1Q99853 325 aa13.63□□□□□ -0.23
CPSF1-205ENST00000531042 ULBP2Q9BZM5 246 aa13.63□□□□□ -0.23
CPSF1-205ENST00000531042 CHODLQ9H9P2 273 aa13.63□□□□□ -0.23
CPSF1-205ENST00000531042 INTS9Q9NV88 658 aaKnown RBP13.63□□□□□ -0.23
CPSF1-205ENST00000531042 ZNF224Q9NZL3 707 aa13.63□□□□□ -0.23
CPSF1-205ENST00000531042 CMAHPQ9Y471 501 aa13.63□□□□□ -0.23
CPSF1-205ENST00000531042 CPSF4LA6NMK7 179 aaKnown RBP13.62□□□□□ -0.23
CPSF1-205ENST00000531042 C11orf98E9PRG8 122 aa13.62□□□□□ -0.23
CPSF1-205ENST00000531042 ANGPT2O15123 496 aa13.62□□□□□ -0.23
CPSF1-205ENST00000531042 SERPINI2O75830 405 aa13.62□□□□□ -0.23
CPSF1-205ENST00000531042 LYPD3O95274 346 aa13.62□□□□□ -0.23
CPSF1-205ENST00000531042 THY1P04216 161 aa13.62□□□□□ -0.23
CPSF1-205ENST00000531042 ZNF35P13682 527 aa13.62□□□□□ -0.23
CPSF1-205ENST00000531042 B4GALT1P15291 398 aa13.62□□□□□ -0.23
CPSF1-205ENST00000531042 THBS2P35442 1172 aa13.62□□□□□ -0.23
CPSF1-205ENST00000531042 WDR88Q6ZMY6 472 aa13.62□□□□□ -0.23
CPSF1-205ENST00000531042 ZNF786Q8N393 782 aa13.62□□□□□ -0.23
CPSF1-205ENST00000531042 OR4D11Q8NGI4 311 aa13.62□□□□□ -0.23
CPSF1-205ENST00000531042 MAGEB18Q96M61 343 aa13.62□□□□□ -0.23
CPSF1-205ENST00000531042 SOX7Q9BT81 388 aa13.62□□□□□ -0.23
CPSF1-205ENST00000531042 KAT8Q9H7Z6 458 aaKnown RBP13.62□□□□□ -0.23
CPSF1-205ENST00000531042 DYNLRB1Q9NP97 96 aa13.62□□□□□ -0.23
CPSF1-205ENST00000531042 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.61□□□□□ -0.238e-10■■■□□ 18.1
CPSF1-205ENST00000531042 OR6A2O95222 327 aa13.61□□□□□ -0.23
CPSF1-205ENST00000531042 ADRA2AP08913 450 aa13.61□□□□□ -0.23
CPSF1-205ENST00000531042 IFNGR1P15260 489 aa13.61□□□□□ -0.23
CPSF1-205ENST00000531042 CD247P20963 164 aa13.61□□□□□ -0.23
CPSF1-205ENST00000531042 PTDSS1P48651 473 aaKnown RBP13.61□□□□□ -0.23
CPSF1-205ENST00000531042 CSNK1A1P48729 337 aa13.61□□□□□ -0.23
CPSF1-205ENST00000531042 BIDP55957 195 aa13.61□□□□□ -0.23
CPSF1-205ENST00000531042 RAB1AP62820 205 aa13.61□□□□□ -0.23
CPSF1-205ENST00000531042 ZP4Q12836 540 aa13.61□□□□□ -0.23
CPSF1-205ENST00000531042 ZNF74Q16587 644 aa13.61□□□□□ -0.23
CPSF1-205ENST00000531042 MSMPQ1L6U9 139 aa13.61□□□□□ -0.23
CPSF1-205ENST00000531042 TRMT5Q32P41 509 aaKnown RBP13.61□□□□□ -0.23
CPSF1-205ENST00000531042 FAM120AOSQ5T036 256 aa13.61□□□□□ -0.23
CPSF1-205ENST00000531042 TTC33Q6PID6 262 aaPredicted RBP13.61□□□□□ -0.23
CPSF1-205ENST00000531042 IL17RELQ6ZVW7 336 aa13.61□□□□□ -0.23
CPSF1-205ENST00000531042 PATL1Q86TB9 770 aaKnown RBP13.61□□□□□ -0.23
CPSF1-205ENST00000531042 RBM45Q8IUH3 476 aaKnown RBP13.61□□□□□ -0.23
CPSF1-205ENST00000531042 SLC30A8Q8IWU4 369 aa13.61□□□□□ -0.23
CPSF1-205ENST00000531042 VANGL1Q8TAA9 524 aaPredicted RBP13.61□□□□□ -0.23
CPSF1-205ENST00000531042 ADAMTS16Q8TE57 1224 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms