RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 TMEM74BQ9NUR3 256 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 A0A0A6YYJ9 748 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 K7EQS6 105 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 CCSO14618 274 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 PNMTP11086 282 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 HSD17B8Q92506 261 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 PGAM5Q96HS1 289 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 ABHD1Q96SE0 405 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 MIXL1Q9H2W2 232 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 MAN2C1Q9NTJ4 1040 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 MED17Q9NVC6 651 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 TAS2R3Q9NYW6 316 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 SIGLEC7Q9Y286 467 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 DTX4Q9Y2E6 619 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 COA3Q9Y2R0 106 aaPredicted RBP11.31□□□□□ -0.6
SCN3B-206ENST00000530277 SIRT4Q9Y6E7 314 aaPredicted RBP11.31□□□□□ -0.6
SCN3B-206ENST00000530277 TP53BP1Q12888 1972 aaPredicted RBP11.31□□□□□ -0.6
SCN3B-206ENST00000530277 C17orf51A8MQB3 221 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 ICOSLGO75144 302 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 PRH1P02810 166 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 ZNF43P17038 809 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 PSMB1P20618 241 aaKnown RBP11.31□□□□□ -0.6
SCN3B-206ENST00000530277 CFL1P23528 166 aaKnown RBP11.31□□□□□ -0.6
SCN3B-206ENST00000530277 SORDQ00796 357 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 RPL18Q07020 188 aaKnown RBP11.31□□□□□ -0.6
SCN3B-206ENST00000530277 IRF3Q14653 427 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 ZNF79Q15937 498 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 CMTM4Q8IZR5 234 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 RFLNBQ8N5W9 214 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 OR52B4Q8NGK2 314 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 CCDC107Q8WV48 283 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 MAP6Q96JE9 813 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 ARPC5LQ9BPX5 153 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 PTGES2Q9H7Z7 377 aa11.31□□□□□ -0.6
SCN3B-206ENST00000530277 C9J4A7 227 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 RP2O75695 350 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 AKR7A3O95154 331 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 RPL35P42766 123 aaKnown RBP11.3□□□□□ -0.6
SCN3B-206ENST00000530277 TMEM176BQ3YBM2 270 aaPredicted RBP11.3□□□□□ -0.6
SCN3B-206ENST00000530277 SSX6Q7RTT6 188 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 OR6F1Q8NGZ6 308 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 ZNF417Q8TAU3 575 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 TOMM40LQ969M1 308 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 ZNF578Q96N58 590 aaPredicted RBP11.3□□□□□ -0.6
SCN3B-206ENST00000530277 ZNF587Q96SQ5 575 aaPredicted RBP11.3□□□□□ -0.6
SCN3B-206ENST00000530277 PTDSS2Q9BVG9 487 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 POTEKPQ9BYX7 375 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 SAV1Q9H4B6 383 aaPredicted RBP11.3□□□□□ -0.6
SCN3B-206ENST00000530277 WDR76Q9H967 626 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 ACKR4Q9NPB9 350 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 RARRES3Q9UL19 164 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 POLHQ9Y253 713 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 RHBDD3Q9Y3P4 386 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 SPTBN1Q01082 2364 aaKnown RBP11.3□□□□□ -0.6
SCN3B-206ENST00000530277 VWA8A3KMH1 1905 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 WDR90Q96KV7 1748 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 CCDC163A0A0D9SF12 145 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 A0A1W2PNR3 127 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 SRPX2O60687 465 aaPredicted RBP11.3□□□□□ -0.6
SCN3B-206ENST00000530277 YPEL5P62699 121 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 MRPS21P82921 87 aaKnown RBP11.3□□□□□ -0.6
SCN3B-206ENST00000530277 FUT5Q11128 374 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 ASAH1Q13510 395 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 GPR50Q13585 617 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 FAM209AQ5JX71 171 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 HEPHL1Q6MZM0 1159 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 CHRDL2Q6WN34 429 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 DGAT2L6Q6ZPD8 337 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 TMEM17Q86X19 198 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 SLC35F3Q8IY50 421 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 ZNF595Q8IYB9 648 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 SLC38A6Q8IZM9 456 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 ELSPBP1Q96BH3 223 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 KTI12Q96EK9 354 aaPredicted RBP11.3□□□□□ -0.6
SCN3B-206ENST00000530277 OR6C1Q96RD1 312 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 CST11Q9H112 138 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 NUBP2Q9Y5Y2 271 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 OR6C68A6NDL8 312 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 RBMXL2O75526 392 aaKnown RBP11.3□□□□□ -0.6
SCN3B-206ENST00000530277 CRTAPO75718 401 aaPredicted RBP11.3□□□□□ -0.6
SCN3B-206ENST00000530277 OR7A10O76100 309 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 TBXA2RP21731 343 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 PRSS12P56730 875 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 GUCA2AQ02747 115 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 SPIN3Q5JUX0 258 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 PNLDC1Q8NA58 520 aaKnown RBP11.3□□□□□ -0.6
SCN3B-206ENST00000530277 ADAMTS18Q8TE60 1221 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 PTP4A1Q93096 173 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 UPRTQ96BW1 309 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 TCTN2Q96GX1 697 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 C19orf43Q9BQ61 176 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 DKKL1Q9UK85 242 aa11.3□□□□□ -0.6
SCN3B-206ENST00000530277 LOC285556D6RIA3 1793 aa11.29□□□□□ -0.6
SCN3B-206ENST00000530277 ACOT7O00154 380 aa11.29□□□□□ -0.6
SCN3B-206ENST00000530277 LANCL1O43813 399 aa11.29□□□□□ -0.6
SCN3B-206ENST00000530277 SWI5Q1ZZU3 235 aa11.29□□□□□ -0.6
SCN3B-206ENST00000530277 COL28A1Q2UY09 1125 aa11.29□□□□□ -0.6
SCN3B-206ENST00000530277 WDR88Q6ZMY6 472 aa11.29□□□□□ -0.6
SCN3B-206ENST00000530277 PELI1Q96FA3 418 aa11.29□□□□□ -0.6
SCN3B-206ENST00000530277 LCORQ96JN0 433 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms