RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 CHN2P52757 468 aa19.34■□□□□ 0.69
TRAPPC4-208ENST00000527680 CDH12P55289 794 aa19.34■□□□□ 0.69
TRAPPC4-208ENST00000527680 TRMT5Q32P41 509 aaKnown RBP19.34■□□□□ 0.69
TRAPPC4-208ENST00000527680 KRTAP24-1Q3LI83 254 aa19.34■□□□□ 0.69
TRAPPC4-208ENST00000527680 BEND6Q5SZJ8 279 aaPredicted RBP19.34■□□□□ 0.69
TRAPPC4-208ENST00000527680 CDK20Q8IZL9 346 aa19.34■□□□□ 0.69
TRAPPC4-208ENST00000527680 SMYD1Q8NB12 490 aa19.34■□□□□ 0.69
TRAPPC4-208ENST00000527680 HIPK4Q8NE63 616 aa19.34■□□□□ 0.69
TRAPPC4-208ENST00000527680 DYDC1Q8WWB3 177 aa19.34■□□□□ 0.69
TRAPPC4-208ENST00000527680 MS4A3Q96HJ5 214 aa19.34■□□□□ 0.69
TRAPPC4-208ENST00000527680 MOGAT1Q96PD6 335 aa19.34■□□□□ 0.69
TRAPPC4-208ENST00000527680 MCHR1Q99705 422 aa19.34■□□□□ 0.69
TRAPPC4-208ENST00000527680 ULBP2Q9BZM5 246 aa19.34■□□□□ 0.69
TRAPPC4-208ENST00000527680 IKZF5Q9H5V7 419 aa19.34■□□□□ 0.69
TRAPPC4-208ENST00000527680 B3GNT2Q9NY97 397 aa19.34■□□□□ 0.69
TRAPPC4-208ENST00000527680 MRPL39Q9NYK5 338 aaKnown RBP19.34■□□□□ 0.69
TRAPPC4-208ENST00000527680 LRRN3E7EW58 273 aa19.33■□□□□ 0.68
TRAPPC4-208ENST00000527680 B4GALT1P15291 398 aa19.33■□□□□ 0.68
TRAPPC4-208ENST00000527680 GIFP27352 417 aa19.33■□□□□ 0.68
TRAPPC4-208ENST00000527680 PTDSS1P48651 473 aaKnown RBP19.33■□□□□ 0.68
TRAPPC4-208ENST00000527680 SRSF2Q01130 221 aaKnown RBP19.33■□□□□ 0.68
TRAPPC4-208ENST00000527680 SQLEQ14534 574 aa19.33■□□□□ 0.68
TRAPPC4-208ENST00000527680 AGBL2Q5U5Z8 902 aa19.33■□□□□ 0.68
TRAPPC4-208ENST00000527680 GKAP1Q5VSY0 366 aaPredicted RBP19.33■□□□□ 0.68
TRAPPC4-208ENST00000527680 PXKQ7Z7A4 578 aa19.33■□□□□ 0.68
TRAPPC4-208ENST00000527680 ZNF786Q8N393 782 aa19.33■□□□□ 0.68
TRAPPC4-208ENST00000527680 WFDC6Q9BQY6 131 aa19.33■□□□□ 0.68
TRAPPC4-208ENST00000527680 TPK1Q9H3S4 243 aa19.33■□□□□ 0.68
TRAPPC4-208ENST00000527680 EVA1AQ9H8M9 152 aa19.33■□□□□ 0.68
TRAPPC4-208ENST00000527680 SLC52A3Q9NQ40 469 aa19.33■□□□□ 0.68
TRAPPC4-208ENST00000527680 C11orf98E9PRG8 122 aa19.32■□□□□ 0.68
TRAPPC4-208ENST00000527680 PLPP3O14495 311 aa19.32■□□□□ 0.68
TRAPPC4-208ENST00000527680 TPST2O60704 377 aa19.32■□□□□ 0.68
TRAPPC4-208ENST00000527680 MFN2O95140 757 aa19.32■□□□□ 0.68
TRAPPC4-208ENST00000527680 ADORA3P0DMS8 318 aa19.32■□□□□ 0.68
TRAPPC4-208ENST00000527680 APEX1P27695 318 aaKnown RBP19.32■□□□□ 0.68
TRAPPC4-208ENST00000527680 RAB1AP62820 205 aa19.32■□□□□ 0.68
TRAPPC4-208ENST00000527680 GALK2Q01415 458 aa19.32■□□□□ 0.68
TRAPPC4-208ENST00000527680 CR1LQ2VPA4 569 aa19.32■□□□□ 0.68
TRAPPC4-208ENST00000527680 SNX18Q96RF0 628 aa19.32■□□□□ 0.68
TRAPPC4-208ENST00000527680 SOX7Q9BT81 388 aa19.32■□□□□ 0.68
TRAPPC4-208ENST00000527680 TMEM43Q9BTV4 400 aa19.32■□□□□ 0.68
TRAPPC4-208ENST00000527680 REV1Q9UBZ9 1251 aa19.32■□□□□ 0.68
TRAPPC4-208ENST00000527680 GMEB1Q9Y692 573 aa19.32■□□□□ 0.68
TRAPPC4-208ENST00000527680 TRBV5-3A0A0A0MS03 114 aa19.31■□□□□ 0.68
TRAPPC4-208ENST00000527680 LYNX1G3V0Z9 82 aa19.31■□□□□ 0.68
TRAPPC4-208ENST00000527680 M0R3H8 397 aa19.31■□□□□ 0.68
TRAPPC4-208ENST00000527680 RAB36O95755 333 aa19.31■□□□□ 0.68
TRAPPC4-208ENST00000527680 LYNX1P0DP58 116 aa19.31■□□□□ 0.68
TRAPPC4-208ENST00000527680 CSNK1A1P48729 337 aa19.31■□□□□ 0.68
TRAPPC4-208ENST00000527680 BIDP55957 195 aa19.31■□□□□ 0.68
TRAPPC4-208ENST00000527680 CYP51A1Q16850 503 aa19.31■□□□□ 0.68
TRAPPC4-208ENST00000527680 SWT1Q5T5J6 900 aaKnown RBP19.31■□□□□ 0.68
TRAPPC4-208ENST00000527680 C11orf65Q8NCR3 313 aa19.31■□□□□ 0.68
TRAPPC4-208ENST00000527680 OR5J2Q8NH18 312 aa19.31■□□□□ 0.68
TRAPPC4-208ENST00000527680 FOXB1Q99853 325 aa19.31■□□□□ 0.68
TRAPPC4-208ENST00000527680 RABEP2Q9H5N1 569 aa19.31■□□□□ 0.68
TRAPPC4-208ENST00000527680 M0QX08 132 aa19.3■□□□□ 0.68
TRAPPC4-208ENST00000527680 SYNGR3O43761 229 aa19.3■□□□□ 0.68
TRAPPC4-208ENST00000527680 LILRA1O75019 489 aa19.3■□□□□ 0.68
TRAPPC4-208ENST00000527680 MT-ATP6P00846 226 aa19.3■□□□□ 0.68
TRAPPC4-208ENST00000527680 TCN1P20061 433 aaPredicted RBP19.3■□□□□ 0.68
TRAPPC4-208ENST00000527680 LSP1P33241 339 aa19.3■□□□□ 0.68
TRAPPC4-208ENST00000527680 GIPRP48546 466 aa19.3■□□□□ 0.68
TRAPPC4-208ENST00000527680 ATP4BP51164 291 aa19.3■□□□□ 0.68
TRAPPC4-208ENST00000527680 RUNDC3AQ59EK9 446 aa19.3■□□□□ 0.68
TRAPPC4-208ENST00000527680 LIPNQ5VXI9 398 aa19.3■□□□□ 0.68
TRAPPC4-208ENST00000527680 ZNF613Q6PF04 617 aa19.3■□□□□ 0.68
TRAPPC4-208ENST00000527680 DLEU7Q6UYE1 221 aa19.3■□□□□ 0.68
TRAPPC4-208ENST00000527680 LINC01356Q8N9X3 169 aa19.3■□□□□ 0.68
TRAPPC4-208ENST00000527680 HPS1Q92902 700 aa19.3■□□□□ 0.68
TRAPPC4-208ENST00000527680 MRPL24Q96A35 216 aaKnown RBP19.3■□□□□ 0.68
TRAPPC4-208ENST00000527680 SYT3Q9BQG1 590 aa19.3■□□□□ 0.68
TRAPPC4-208ENST00000527680 C19orf24Q9BVV8 132 aa19.3■□□□□ 0.68
TRAPPC4-208ENST00000527680 MRPL37Q9BZE1 423 aaKnown RBP19.3■□□□□ 0.68
TRAPPC4-208ENST00000527680 MS4A5Q9H3V2 200 aa19.3■□□□□ 0.68
TRAPPC4-208ENST00000527680 TMEFF2Q9UIK5 374 aaPredicted RBP19.3■□□□□ 0.68
TRAPPC4-208ENST00000527680 LEF1Q9UJU2 399 aaPredicted RBP19.3■□□□□ 0.68
TRAPPC4-208ENST00000527680 CPSF4LA6NMK7 179 aaKnown RBP19.29■□□□□ 0.68
TRAPPC4-208ENST00000527680 M0R233 179 aa19.29■□□□□ 0.68
TRAPPC4-208ENST00000527680 OPN1SWP03999 348 aa19.29■□□□□ 0.68
TRAPPC4-208ENST00000527680 HIST1H2ABP04908 130 aa19.29■□□□□ 0.68
TRAPPC4-208ENST00000527680 TACSTD2P09758 323 aa19.29■□□□□ 0.68
TRAPPC4-208ENST00000527680 ZNF35P13682 527 aa19.29■□□□□ 0.68
TRAPPC4-208ENST00000527680 ZNF14P17017 642 aaPredicted RBP19.29■□□□□ 0.68
TRAPPC4-208ENST00000527680 IL2RGP31785 369 aa19.29■□□□□ 0.68
TRAPPC4-208ENST00000527680 GLRXP35754 106 aa19.29■□□□□ 0.68
TRAPPC4-208ENST00000527680 SRP14P37108 136 aaKnown RBP19.29■□□□□ 0.68
TRAPPC4-208ENST00000527680 EVX1P49640 407 aa19.29■□□□□ 0.68
TRAPPC4-208ENST00000527680 DUSP7Q16829 419 aa19.29■□□□□ 0.68
TRAPPC4-208ENST00000527680 TTC33Q6PID6 262 aaPredicted RBP19.29■□□□□ 0.68
TRAPPC4-208ENST00000527680 NHLRC1Q6VVB1 395 aa19.29■□□□□ 0.68
TRAPPC4-208ENST00000527680 HIST3H2AQ7L7L0 130 aa19.29■□□□□ 0.68
TRAPPC4-208ENST00000527680 HIST1H2ACQ93077 130 aa19.29■□□□□ 0.68
TRAPPC4-208ENST00000527680 CPPED1Q9BRF8 314 aaPredicted RBP19.29■□□□□ 0.68
TRAPPC4-208ENST00000527680 DENND2DQ9H6A0 471 aaPredicted RBP19.29■□□□□ 0.68
TRAPPC4-208ENST00000527680 DUSP13Q9UII6 198 aa19.29■□□□□ 0.68
TRAPPC4-208ENST00000527680 NDUFAF1Q9Y375 327 aa19.29■□□□□ 0.68
TRAPPC4-208ENST00000527680 UBL3O95164 117 aa19.28■□□□□ 0.68
TRAPPC4-208ENST00000527680 CH25HO95992 272 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms