RNA–Protein interactions for RNA: ENST00000523699.5

CDK16-222, Transcript of cyclin dependent kinase 16, human

TSL 5

Gene CDK16, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK16-222	ENST00000523699	MED29	Q9NX70	200 aa		13.56	□□□□□ -0.24
CDK16-222	ENST00000523699	LEF1	Q9UJU2	399 aa	Predicted RBP	13.56	□□□□□ -0.24
CDK16-222	ENST00000523699	TRIM33	Q9UPN9	1127 aa		13.56	□□□□□ -0.24
CDK16-222	ENST00000523699	CAD	P27708	2225 aa		13.56	□□□□□ -0.24
CDK16-222	ENST00000523699	SH3PXD2B	A1X283	911 aa		13.55	□□□□□ -0.24
CDK16-222	ENST00000523699	CHP2	O43745	196 aa		13.55	□□□□□ -0.24
CDK16-222	ENST00000523699	UBL3	O95164	117 aa		13.55	□□□□□ -0.24
CDK16-222	ENST00000523699	STAMBP	O95630	424 aa		13.55	□□□□□ -0.24
CDK16-222	ENST00000523699	HPR	P00739	348 aa		13.55	□□□□□ -0.24
CDK16-222	ENST00000523699	TGFA	P01135	160 aa		13.55	□□□□□ -0.24
CDK16-222	ENST00000523699	ADORA3	P0DMS8	318 aa		13.55	□□□□□ -0.24
CDK16-222	ENST00000523699	HLA-DOB	P13765	273 aa		13.55	□□□□□ -0.24
CDK16-222	ENST00000523699	B4GALT1	P15291	398 aa		13.55	□□□□□ -0.24
CDK16-222	ENST00000523699	PTDSS1	P48651	473 aa	Known RBP	13.55	□□□□□ -0.24
CDK16-222	ENST00000523699	CDH12	P55289	794 aa		13.55	□□□□□ -0.24
CDK16-222	ENST00000523699	UGT2A3	Q6UWM9	527 aa		13.55	□□□□□ -0.24
CDK16-222	ENST00000523699	PXK	Q7Z7A4	578 aa		13.55	□□□□□ -0.24
CDK16-222	ENST00000523699	SLC30A8	Q8IWU4	369 aa		13.55	□□□□□ -0.24
CDK16-222	ENST00000523699	ARIH2OS	Q8N7S6	290 aa		13.55	□□□□□ -0.24
CDK16-222	ENST00000523699	SMYD1	Q8NB12	490 aa		13.55	□□□□□ -0.24
CDK16-222	ENST00000523699	OR5J2	Q8NH18	312 aa		13.55	□□□□□ -0.24
CDK16-222	ENST00000523699	ATP6V1G3	Q96LB4	118 aa		13.55	□□□□□ -0.24
CDK16-222	ENST00000523699	MOGAT1	Q96PD6	335 aa		13.55	□□□□□ -0.24
CDK16-222	ENST00000523699	DOK1	Q99704	481 aa		13.55	□□□□□ -0.24
CDK16-222	ENST00000523699	MCHR1	Q99705	422 aa		13.55	□□□□□ -0.24
CDK16-222	ENST00000523699	FOXB1	Q99853	325 aa		13.55	□□□□□ -0.24
CDK16-222	ENST00000523699	IKZF5	Q9H5V7	419 aa		13.55	□□□□□ -0.24
CDK16-222	ENST00000523699	NDUFAF1	Q9Y375	327 aa		13.55	□□□□□ -0.24
CDK16-222	ENST00000523699	ZNF503-AS2	A6NEH8	195 aa		13.54	□□□□□ -0.24
CDK16-222	ENST00000523699	MS4A18	H0YCH9	400 aa		13.54	□□□□□ -0.24
CDK16-222	ENST00000523699		M0R233	179 aa		13.54	□□□□□ -0.24
CDK16-222	ENST00000523699		M0R3H8	397 aa		13.54	□□□□□ -0.24
CDK16-222	ENST00000523699	MFN2	O95140	757 aa		13.54	□□□□□ -0.24
CDK16-222	ENST00000523699	ADRA2A	P08913	450 aa		13.54	□□□□□ -0.24
CDK16-222	ENST00000523699	IFNGR1	P15260	489 aa		13.54	□□□□□ -0.24
CDK16-222	ENST00000523699	NR4A1	P22736	598 aa		13.54	□□□□□ -0.24
CDK16-222	ENST00000523699	GIF	P27352	417 aa		13.54	□□□□□ -0.24
CDK16-222	ENST00000523699	APEX1	P27695	318 aa	Known RBP	13.54	□□□□□ -0.24
CDK16-222	ENST00000523699	PIGF	Q07326	219 aa		13.54	□□□□□ -0.24
CDK16-222	ENST00000523699	CAMK2D	Q13557	499 aa		13.54	□□□□□ -0.24
CDK16-222	ENST00000523699	MS4A18	Q3C1V0	323 aa		13.54	□□□□□ -0.24
CDK16-222	ENST00000523699	PHYHD1	Q5SRE7	291 aa		13.54	□□□□□ -0.24
CDK16-222	ENST00000523699	REP15	Q6BDI9	236 aa		13.54	□□□□□ -0.24
CDK16-222	ENST00000523699	IL17REL	Q6ZVW7	336 aa		13.54	□□□□□ -0.24
CDK16-222	ENST00000523699	ZNF627	Q7L945	461 aa		13.54	□□□□□ -0.24
CDK16-222	ENST00000523699	CDK20	Q8IZL9	346 aa		13.54	□□□□□ -0.24
CDK16-222	ENST00000523699	ZNF786	Q8N393	782 aa		13.54	□□□□□ -0.24
CDK16-222	ENST00000523699	SLC26A7	Q8TE54	656 aa		13.54	□□□□□ -0.24
CDK16-222	ENST00000523699	UBASH3B	Q8TF42	649 aa		13.54	□□□□□ -0.24
CDK16-222	ENST00000523699	HPS1	Q92902	700 aa		13.54	□□□□□ -0.24
CDK16-222	ENST00000523699	MS4A5	Q9H3V2	200 aa		13.54	□□□□□ -0.24
CDK16-222	ENST00000523699	STAB1	Q9NY15	2570 aa		13.54	□□□□□ -0.24
CDK16-222	ENST00000523699	PLPP3	O14495	311 aa		13.53	□□□□□ -0.24
CDK16-222	ENST00000523699	SYNGR3	O43761	229 aa		13.53	□□□□□ -0.24
CDK16-222	ENST00000523699	PCMT1	P22061	227 aa		13.53	□□□□□ -0.24
CDK16-222	ENST00000523699	GIPR	P48546	466 aa		13.53	□□□□□ -0.24
CDK16-222	ENST00000523699	EVX1	P49640	407 aa		13.53	□□□□□ -0.24
CDK16-222	ENST00000523699	BID	P55957	195 aa		13.53	□□□□□ -0.24
CDK16-222	ENST00000523699	INTS11	Q5TA45	600 aa	Known RBP	13.53	□□□□□ -0.24
CDK16-222	ENST00000523699	TTC33	Q6PID6	262 aa	Predicted RBP	13.53	□□□□□ -0.24
CDK16-222	ENST00000523699	PATL1	Q86TB9	770 aa	Known RBP	13.53	□□□□□ -0.24
CDK16-222	ENST00000523699	STON2	Q8WXE9	905 aa		13.53	□□□□□ -0.24
CDK16-222	ENST00000523699	MRPL24	Q96A35	216 aa	Known RBP	13.53	□□□□□ -0.24
CDK16-222	ENST00000523699	MS4A3	Q96HJ5	214 aa		13.53	□□□□□ -0.24
CDK16-222	ENST00000523699	TXNDC15	Q96J42	360 aa		13.53	□□□□□ -0.24
CDK16-222	ENST00000523699	ARHGDIG	Q99819	225 aa		13.53	□□□□□ -0.24
CDK16-222	ENST00000523699	TPK1	Q9H3S4	243 aa		13.53	□□□□□ -0.24
CDK16-222	ENST00000523699	SLC52A3	Q9NQ40	469 aa		13.53	□□□□□ -0.24
CDK16-222	ENST00000523699	INTS9	Q9NV88	658 aa	Known RBP	13.53	□□□□□ -0.24
CDK16-222	ENST00000523699	B3GNT2	Q9NY97	397 aa		13.53	□□□□□ -0.24
CDK16-222	ENST00000523699	LRP5L	A4QPB2	252 aa		13.52	□□□□□ -0.25
CDK16-222	ENST00000523699	CPSF4L	A6NMK7	179 aa	Known RBP	13.52	□□□□□ -0.25
CDK16-222	ENST00000523699	LRRN3	E7EW58	273 aa		13.52	□□□□□ -0.25
CDK16-222	ENST00000523699	C11orf98	E9PRG8	122 aa		13.52	□□□□□ -0.25
CDK16-222	ENST00000523699	RNF13	O43567	381 aa		13.52	□□□□□ -0.25
CDK16-222	ENST00000523699	FARS2	O95363	451 aa	Known RBP	13.52	□□□□□ -0.25
CDK16-222	ENST00000523699	OPN1SW	P03999	348 aa		13.52	□□□□□ -0.25
CDK16-222	ENST00000523699	HIST1H2AB	P04908	130 aa		13.52	□□□□□ -0.25
CDK16-222	ENST00000523699	TACSTD2	P09758	323 aa		13.52	□□□□□ -0.25
CDK16-222	ENST00000523699	ZNF14	P17017	642 aa	Predicted RBP	13.52	□□□□□ -0.25
CDK16-222	ENST00000523699	PCBP3	P57721	371 aa	Known RBP	13.52	□□□□□ -0.25
CDK16-222	ENST00000523699	MTPN	P58546	118 aa		13.52	□□□□□ -0.25
CDK16-222	ENST00000523699	RAB1A	P62820	205 aa		13.52	□□□□□ -0.25
CDK16-222	ENST00000523699	NFYC	Q13952	458 aa		13.52	□□□□□ -0.25
CDK16-222	ENST00000523699	RUNDC3A	Q59EK9	446 aa		13.52	□□□□□ -0.25
CDK16-222	ENST00000523699	ENTPD8	Q5MY95	495 aa		13.52	□□□□□ -0.25
CDK16-222	ENST00000523699	DLEU7	Q6UYE1	221 aa		13.52	□□□□□ -0.25
CDK16-222	ENST00000523699	HIST3H2A	Q7L7L0	130 aa		13.52	□□□□□ -0.25
CDK16-222	ENST00000523699	PIWIL3	Q7Z3Z3	882 aa	Known RBP	13.52	□□□□□ -0.25
CDK16-222	ENST00000523699	ZCCHC24	Q8N2G6	241 aa	Known RBP	13.52	□□□□□ -0.25
CDK16-222	ENST00000523699	LINC01356	Q8N9X3	169 aa		13.52	□□□□□ -0.25
CDK16-222	ENST00000523699	VANGL1	Q8TAA9	524 aa	Predicted RBP	13.52	□□□□□ -0.25
CDK16-222	ENST00000523699	RASSF5	Q8WWW0	418 aa		13.52	□□□□□ -0.25
CDK16-222	ENST00000523699	HIST1H2AC	Q93077	130 aa		13.52	□□□□□ -0.25
CDK16-222	ENST00000523699	ZNF566	Q969W8	418 aa		13.52	□□□□□ -0.25
CDK16-222	ENST00000523699	MPP4	Q96JB8	637 aa		13.52	□□□□□ -0.25
CDK16-222	ENST00000523699	SNX18	Q96RF0	628 aa		13.52	□□□□□ -0.25
CDK16-222	ENST00000523699	CGREF1	Q99674	301 aa		13.52	□□□□□ -0.25
CDK16-222	ENST00000523699	RSPO3	Q9BXY4	272 aa	Predicted RBP	13.52	□□□□□ -0.25
CDK16-222	ENST00000523699	SLC19A3	Q9BZV2	496 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms