RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 MAGEE2Q8TD90 523 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-215ENST00000519474 SLC26A7Q8TE54 656 aa8.16□□□□□ -1.1
HDAC3-215ENST00000519474 ADAMTS16Q8TE57 1224 aa8.16□□□□□ -1.1
HDAC3-215ENST00000519474 TRMT61AQ96FX7 289 aaKnown RBP8.16□□□□□ -1.1
HDAC3-215ENST00000519474 LRR1Q96L50 414 aa8.16□□□□□ -1.1
HDAC3-215ENST00000519474 OR2M2Q96R28 347 aa8.16□□□□□ -1.1
HDAC3-215ENST00000519474 NR1H4Q96RI1 486 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-215ENST00000519474 EPYCQ99645 322 aa8.16□□□□□ -1.1
HDAC3-215ENST00000519474 DHRS9Q9BPW9 319 aa8.16□□□□□ -1.1
HDAC3-215ENST00000519474 PRSS27Q9BQR3 290 aa8.16□□□□□ -1.1
HDAC3-215ENST00000519474 EMC6Q9BV81 110 aa8.16□□□□□ -1.1
HDAC3-215ENST00000519474 PCDHAC1Q9H158 963 aa8.16□□□□□ -1.1
HDAC3-215ENST00000519474 NELFAQ9H3P2 528 aa8.16□□□□□ -1.1
HDAC3-215ENST00000519474 GPR35Q9HC97 309 aa8.16□□□□□ -1.1
HDAC3-215ENST00000519474 MRGBPQ9NV56 204 aa8.16□□□□□ -1.1
HDAC3-215ENST00000519474 MRPL39Q9NYK5 338 aaKnown RBP8.16□□□□□ -1.1
HDAC3-215ENST00000519474 TAS2R5Q9NYW4 299 aa8.16□□□□□ -1.1
HDAC3-215ENST00000519474 RCE1Q9Y256 329 aa8.16□□□□□ -1.1
HDAC3-215ENST00000519474 CORINQ9Y5Q5 1042 aa8.16□□□□□ -1.1
HDAC3-215ENST00000519474 A0A096LPE4 126 aa8.15□□□□□ -1.1
HDAC3-215ENST00000519474 A0A1W2PPZ6 126 aa8.15□□□□□ -1.1
HDAC3-215ENST00000519474 SLC35F4A4IF30 521 aa8.15□□□□□ -1.1
HDAC3-215ENST00000519474 TRAPPC13A5PLN9 417 aa8.15□□□□□ -1.1
HDAC3-215ENST00000519474 CPSF4LA6NMK7 179 aaKnown RBP8.15□□□□□ -1.1
HDAC3-215ENST00000519474 BBIP1A8MTZ0 92 aa8.15□□□□□ -1.1
HDAC3-215ENST00000519474 ZNF587BE7ETH6 402 aa8.15□□□□□ -1.1
HDAC3-215ENST00000519474 TRAF3IP2O43734 574 aaPredicted RBP8.15□□□□□ -1.1
HDAC3-215ENST00000519474 CHP2O43745 196 aa8.15□□□□□ -1.1
HDAC3-215ENST00000519474 SLC43A1O75387 559 aa8.15□□□□□ -1.1
HDAC3-215ENST00000519474 WNT11O96014 354 aa8.15□□□□□ -1.1
HDAC3-215ENST00000519474 TNFRSF1BP20333 461 aa8.15□□□□□ -1.1
HDAC3-215ENST00000519474 GTF2E2P29084 291 aaKnown RBP8.15□□□□□ -1.1
HDAC3-215ENST00000519474 KDELR2P33947 212 aa8.15□□□□□ -1.1
HDAC3-215ENST00000519474 NCALDP61601 193 aa8.15□□□□□ -1.1
HDAC3-215ENST00000519474 ZP4Q12836 540 aa8.15□□□□□ -1.1
HDAC3-215ENST00000519474 PMS2P3Q13401 168 aa8.15□□□□□ -1.1
HDAC3-215ENST00000519474 MST1LQ2TV78 715 aa8.15□□□□□ -1.1
HDAC3-215ENST00000519474 AGAP6Q5VW22 663 aa8.15□□□□□ -1.1
HDAC3-215ENST00000519474 C11orf71Q6IPW1 123 aa8.15□□□□□ -1.1
HDAC3-215ENST00000519474 HMBOX1Q6NT76 420 aa8.15□□□□□ -1.1
HDAC3-215ENST00000519474 TTC33Q6PID6 262 aaPredicted RBP8.15□□□□□ -1.1
HDAC3-215ENST00000519474 PXKQ7Z7A4 578 aa8.15□□□□□ -1.1
HDAC3-215ENST00000519474 C20orf196Q8IYI0 205 aa8.15□□□□□ -1.1
HDAC3-215ENST00000519474 DEPDC4Q8N2C3 294 aa8.15□□□□□ -1.1
HDAC3-215ENST00000519474 LRRC17Q8N6Y2 441 aa8.15□□□□□ -1.1
HDAC3-215ENST00000519474 POU5F2Q8N7G0 328 aa8.15□□□□□ -1.1
HDAC3-215ENST00000519474 SCAIQ8N9R8 606 aa8.15□□□□□ -1.1
HDAC3-215ENST00000519474 PCYOX1LQ8NBM8 494 aa8.15□□□□□ -1.1
HDAC3-215ENST00000519474 RP9Q8TA86 221 aaKnown RBP8.15□□□□□ -1.1
HDAC3-215ENST00000519474 COX4I2Q96KJ9 171 aa8.15□□□□□ -1.1
HDAC3-215ENST00000519474 ZNF426Q9BUY5 554 aa8.15□□□□□ -1.1
HDAC3-215ENST00000519474 MEPEQ9NQ76 525 aaPredicted RBP8.15□□□□□ -1.1
HDAC3-215ENST00000519474 CBLN4Q9NTU7 201 aa8.15□□□□□ -1.1
HDAC3-215ENST00000519474 GID8Q9NWU2 228 aa8.15□□□□□ -1.1
HDAC3-215ENST00000519474 CMTM6Q9NX76 183 aa8.15□□□□□ -1.1
HDAC3-215ENST00000519474 ARMCX1Q9P291 453 aa8.15□□□□□ -1.1
HDAC3-215ENST00000519474 GMPR2Q9P2T1 348 aaKnown RBP8.15□□□□□ -1.1
HDAC3-215ENST00000519474 CRNNQ9UBG3 495 aaPredicted RBP8.15□□□□□ -1.1
HDAC3-215ENST00000519474 GDF2Q9UK05 429 aaPredicted RBP8.15□□□□□ -1.1
HDAC3-215ENST00000519474 SLC7A7Q9UM01 511 aa8.15□□□□□ -1.1
HDAC3-215ENST00000519474 MOKQ9UQ07 419 aa8.15□□□□□ -1.1
HDAC3-215ENST00000519474 SH3GLB1Q9Y371 365 aa8.15□□□□□ -1.1
HDAC3-215ENST00000519474 ACANP16112 2415 aa8.15□□□□□ -1.1
HDAC3-215ENST00000519474 CELSR1Q9NYQ6 3014 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 ZNF469Q96JG9 3925 aaPredicted RBP8.14□□□□□ -1.11
HDAC3-215ENST00000519474 IGHV1-18A0A0C4DH31 117 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 SMAD7O15105 426 aaKnown RBP8.14□□□□□ -1.11
HDAC3-215ENST00000519474 SHOX2O60902 331 aaPredicted RBP8.14□□□□□ -1.11
HDAC3-215ENST00000519474 DNAJC8O75937 253 aaPredicted RBP8.14□□□□□ -1.11
HDAC3-215ENST00000519474 CH25HO95992 272 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 MT-ATP6P00846 226 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 IGHV4-39P01824 125 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 COX4I1P13073 169 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 NQO1P15559 274 aaKnown RBP8.14□□□□□ -1.11
HDAC3-215ENST00000519474 CBR1P16152 277 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 FUT4P22083 530 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 APOBEC3AP31941 199 aaPredicted RBP8.14□□□□□ -1.11
HDAC3-215ENST00000519474 ACVR1BP36896 505 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 OR1E2P47887 323 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 FABP6P51161 128 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 CDH11P55287 796 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 CAMK2DQ13557 499 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 CLEC12BQ2HXU8 276 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 CEACAM16Q2WEN9 425 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 CARD17Q5XLA6 110 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 ERICH5Q6P6B1 374 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 CLEC9AQ6UXN8 241 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 DNM1P46Q6ZS02 220 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 CARM1Q86X55 608 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 TREML1Q86YW5 311 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 NKAIN4Q8IVV8 208 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 UEVLDQ8IX04 471 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 GPR137CQ8N3F9 429 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 C10orf53Q8N6V4 93 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 FAM169BQ8N8A8 192 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 PIK3C3Q8NEB9 887 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 OR5J2Q8NH18 312 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 RASSF5Q8WWW0 418 aa8.14□□□□□ -1.11
HDAC3-215ENST00000519474 GTPBP3Q969Y2 492 aaKnown RBP8.14□□□□□ -1.11
HDAC3-215ENST00000519474 ALKBH3Q96Q83 286 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms