RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 SIRPAP78324 504 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 NHLH2Q02577 135 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 PRKCZQ05513 592 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 TNFRSF9Q07011 255 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 CXCL9Q07325 125 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 BIKQ13323 160 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 FNDC3BQ53EP0 1204 aaKnown RBP12.39□□□□□ -0.43
PABPC1-208ENST00000519004 ACTBL2Q562R1 376 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 PAPD4Q6PIY7 484 aaKnown RBP12.39□□□□□ -0.43
PABPC1-208ENST00000519004 MBOAT2Q6ZWT7 520 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 DND1Q8IYX4 353 aaKnown RBP12.39□□□□□ -0.43
PABPC1-208ENST00000519004 CARFQ8N187 725 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 CBARPQ8N350 705 aaPredicted RBP12.39□□□□□ -0.43
PABPC1-208ENST00000519004 OR4K17Q8NGC6 315 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 OR8S1Q8NH09 359 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 OR56A3Q8NH54 315 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 ADAMTS17Q8TE56 1095 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 SLC35G5Q96KT7 338 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 CDCA3Q99618 268 aaPredicted RBP12.39□□□□□ -0.43
PABPC1-208ENST00000519004 C1QTNF2Q9BXJ5 285 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 TRPC4Q9UBN4 977 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 UPB1Q9UBR1 384 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 FCF1Q9Y324 198 aaKnown RBP12.39□□□□□ -0.43
PABPC1-208ENST00000519004 ETV7Q9Y603 341 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 TRBV2A0A0J9YWF9 115 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 OR52A4PA6NMU1 304 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 TMEM127O75204 238 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 PAPLNO95428 1278 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 SMIM10L2AP0DMW4 78 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 SMIM10L2BP0DMW5 78 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 EDN3P14138 238 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 FUT1P19526 365 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 GRK4P32298 578 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 DVL1P1P54792 670 aaPredicted RBP12.39□□□□□ -0.43
PABPC1-208ENST00000519004 RGS8P57771 180 aaPredicted RBP12.39□□□□□ -0.43
PABPC1-208ENST00000519004 CD81P60033 236 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 RHOAP61586 193 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 PRAMEF17Q5VTA0 474 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 RNF219Q5W0B1 726 aaPredicted RBP12.39□□□□□ -0.43
PABPC1-208ENST00000519004 STEAP1BQ6NZ63 245 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 CLEC1AQ8NC01 280 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 PHYHIPQ92561 330 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 YPEL4Q96NS1 127 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 MRI1Q9BV20 369 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 GPR62Q9BZJ7 368 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 WNT5BQ9H1J7 359 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 LTBP3Q9NS15 1303 aa12.39□□□□□ -0.43
PABPC1-208ENST00000519004 A0A1W2PPE2 198 aa12.38□□□□□ -0.43
PABPC1-208ENST00000519004 MBLAC1A4D2B0 266 aaPredicted RBP12.38□□□□□ -0.43
PABPC1-208ENST00000519004 RPL36A-HNRNPH2H7BZ11 118 aa12.38□□□□□ -0.43
PABPC1-208ENST00000519004 SLC16A8O95907 504 aa12.38□□□□□ -0.43
PABPC1-208ENST00000519004 LRG1P02750 347 aa12.38□□□□□ -0.43
PABPC1-208ENST00000519004 CD1AP06126 327 aa12.38□□□□□ -0.43
PABPC1-208ENST00000519004 HLA-GP17693 338 aa12.38□□□□□ -0.43
PABPC1-208ENST00000519004 C5AR1P21730 350 aa12.38□□□□□ -0.43
PABPC1-208ENST00000519004 AQP2P41181 271 aa12.38□□□□□ -0.43
PABPC1-208ENST00000519004 RBM34P42696 430 aaKnown RBP12.38□□□□□ -0.43
PABPC1-208ENST00000519004 PCBP4P57723 403 aaKnown RBP12.38□□□□□ -0.43
PABPC1-208ENST00000519004 ACTC1P68032 377 aa12.38□□□□□ -0.43
PABPC1-208ENST00000519004 ACTA1P68133 377 aa12.38□□□□□ -0.43
PABPC1-208ENST00000519004 HMGN3Q15651 99 aa12.38□□□□□ -0.43
PABPC1-208ENST00000519004 BTNL8Q6UX41 500 aa12.38□□□□□ -0.43
PABPC1-208ENST00000519004 GALNT16Q8N428 558 aa12.38□□□□□ -0.43
PABPC1-208ENST00000519004 AVL9Q8NBF6 648 aa12.38□□□□□ -0.43
PABPC1-208ENST00000519004 SUN3Q8TAQ9 357 aa12.38□□□□□ -0.43
PABPC1-208ENST00000519004 FBXO32Q969P5 355 aa12.38□□□□□ -0.43
PABPC1-208ENST00000519004 OR5B2Q96R09 309 aa12.38□□□□□ -0.43
PABPC1-208ENST00000519004 C20orf24Q9BUV8 137 aa12.38□□□□□ -0.43
PABPC1-208ENST00000519004 ZNF426Q9BUY5 554 aa12.38□□□□□ -0.43
PABPC1-208ENST00000519004 KCNE5Q9UJ90 142 aa12.38□□□□□ -0.43
PABPC1-208ENST00000519004 CASP8AP2Q9UKL3 1982 aa12.38□□□□□ -0.43
PABPC1-208ENST00000519004 GLCEO94923 617 aa12.38□□□□□ -0.43
PABPC1-208ENST00000519004 CTSLP07711 333 aa12.38□□□□□ -0.43
PABPC1-208ENST00000519004 TIMP2P16035 220 aa12.38□□□□□ -0.43
PABPC1-208ENST00000519004 EDNRAP25101 427 aa12.38□□□□□ -0.43
PABPC1-208ENST00000519004 CRABP1P29762 137 aa12.38□□□□□ -0.43
PABPC1-208ENST00000519004 SULT1A1P50225 295 aa12.38□□□□□ -0.43
PABPC1-208ENST00000519004 ADPRHP54922 357 aa12.38□□□□□ -0.43
PABPC1-208ENST00000519004 RPL22L1Q6P5R6 122 aaKnown RBP12.38□□□□□ -0.43
PABPC1-208ENST00000519004 HEPN1Q6WQI6 88 aa12.38□□□□□ -0.43
PABPC1-208ENST00000519004 SPNS3Q6ZMD2 512 aa12.38□□□□□ -0.43
PABPC1-208ENST00000519004 RFLNAQ6ZTI6 216 aa12.38□□□□□ -0.43
PABPC1-208ENST00000519004 SZRD1Q7Z422 152 aa12.38□□□□□ -0.43
PABPC1-208ENST00000519004 ZNF280BQ86YH2 543 aa12.38□□□□□ -0.43
PABPC1-208ENST00000519004 GJD3Q8N144 294 aa12.38□□□□□ -0.43
PABPC1-208ENST00000519004 RRNAD1Q96FB5 475 aaKnown RBP12.38□□□□□ -0.43
PABPC1-208ENST00000519004 INSM2Q96T92 566 aaPredicted RBP12.38□□□□□ -0.43
PABPC1-208ENST00000519004 ATG101Q9BSB4 218 aa12.38□□□□□ -0.43
PABPC1-208ENST00000519004 RIOK2Q9BVS4 552 aaKnown RBP12.38□□□□□ -0.43
PABPC1-208ENST00000519004 ATG5Q9H1Y0 275 aa12.38□□□□□ -0.43
PABPC1-208ENST00000519004 ZNF726A6NNF4 738 aa12.37□□□□□ -0.43
PABPC1-208ENST00000519004 SEC14L6B5MCN3 397 aa12.37□□□□□ -0.43
PABPC1-208ENST00000519004 ZNF197O14709 1029 aa12.37□□□□□ -0.43
PABPC1-208ENST00000519004 RPN2P04844 631 aa12.37□□□□□ -0.43
PABPC1-208ENST00000519004 SFTPBP07988 381 aa12.37□□□□□ -0.43
PABPC1-208ENST00000519004 NKAIN2Q5VXU1 208 aa12.37□□□□□ -0.43
PABPC1-208ENST00000519004 GDF7Q7Z4P5 450 aa12.37□□□□□ -0.43
PABPC1-208ENST00000519004 LCN9Q8WX39 176 aa12.37□□□□□ -0.43
PABPC1-208ENST00000519004 ZBTB8AQ96BR9 441 aa12.37□□□□□ -0.43
PABPC1-208ENST00000519004 PTGES2Q9H7Z7 377 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms