RNA–Protein interactions for RNA: ENST00000515791.1

SFXN1-212, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-212ENST00000515791 SLC46A3Q7Z3Q1 461 aa15.32■□□□□ 0.04
SFXN1-212ENST00000515791 CCDC36Q8IYA8 594 aa15.32■□□□□ 0.04
SFXN1-212ENST00000515791 NUP37Q8NFH4 326 aa15.32■□□□□ 0.04
SFXN1-212ENST00000515791 TMEM54Q969K7 222 aa15.32■□□□□ 0.04
SFXN1-212ENST00000515791 SORCS2Q96PQ0 1159 aa15.32■□□□□ 0.04
SFXN1-212ENST00000515791 PLK3Q9H4B4 646 aa15.32■□□□□ 0.04
SFXN1-212ENST00000515791 CCDC134Q9H6E4 229 aa15.32■□□□□ 0.04
SFXN1-212ENST00000515791 PMF1-BGLAPU3KQ54 211 aa15.32■□□□□ 0.04
SFXN1-212ENST00000515791 SONP18583 2426 aaKnown RBP15.32■□□□□ 0.04
SFXN1-212ENST00000515791 TMEM129A0AVI4 362 aa15.31■□□□□ 0.04
SFXN1-212ENST00000515791 VWC2LB2RUY7 222 aa15.31■□□□□ 0.04
SFXN1-212ENST00000515791 CH25HO95992 272 aa15.31■□□□□ 0.04
SFXN1-212ENST00000515791 ARR3P36575 388 aa15.31■□□□□ 0.04
SFXN1-212ENST00000515791 IDH3GP51553 393 aaPredicted RBP15.31■□□□□ 0.04
SFXN1-212ENST00000515791 TTC33Q6PID6 262 aaPredicted RBP15.31■□□□□ 0.04
SFXN1-212ENST00000515791 OR4F15Q8NGB8 312 aa15.31■□□□□ 0.04
SFXN1-212ENST00000515791 RASSF5Q8WWW0 418 aa15.31■□□□□ 0.04
SFXN1-212ENST00000515791 MPP4Q96JB8 637 aa15.31■□□□□ 0.04
SFXN1-212ENST00000515791 SLC19A3Q9BZV2 496 aa15.31■□□□□ 0.04
SFXN1-212ENST00000515791 ZNF442Q9H7R0 627 aa15.31■□□□□ 0.04
SFXN1-212ENST00000515791 CHD3Q12873 2000 aaKnown RBP15.31■□□□□ 0.04
SFXN1-212ENST00000515791 BBIP1A8MTZ0 92 aa15.3■□□□□ 0.04
SFXN1-212ENST00000515791 B9A039 149 aa15.3■□□□□ 0.04
SFXN1-212ENST00000515791 C11orf98E9PRG8 122 aa15.3■□□□□ 0.04
SFXN1-212ENST00000515791 MRASO14807 208 aa15.3■□□□□ 0.04
SFXN1-212ENST00000515791 TLX2O43763 284 aaPredicted RBP15.3■□□□□ 0.04
SFXN1-212ENST00000515791 HLA-HP01893 362 aa15.3■□□□□ 0.04
SFXN1-212ENST00000515791 OR4A8P0C604 315 aa15.3■□□□□ 0.04
SFXN1-212ENST00000515791 ADORA3P0DMS8 318 aa15.3■□□□□ 0.04
SFXN1-212ENST00000515791 TROVE2P10155 538 aaKnown RBP eCLIP15.3■□□□□ 0.04
SFXN1-212ENST00000515791 BMP4P12644 408 aa15.3■□□□□ 0.04
SFXN1-212ENST00000515791 IFNGR1P15260 489 aa15.3■□□□□ 0.04
SFXN1-212ENST00000515791 SLC25A16P16260 332 aa15.3■□□□□ 0.04
SFXN1-212ENST00000515791 ZNF14P17017 642 aaPredicted RBP15.3■□□□□ 0.04
SFXN1-212ENST00000515791 TNFRSF1BP20333 461 aa15.3■□□□□ 0.04
SFXN1-212ENST00000515791 AHCYP23526 432 aa15.3■□□□□ 0.04
SFXN1-212ENST00000515791 THBS4P35443 961 aa15.3■□□□□ 0.04
SFXN1-212ENST00000515791 MSMPQ1L6U9 139 aa15.3■□□□□ 0.04
SFXN1-212ENST00000515791 TMEM249Q2WGJ8 235 aa15.3■□□□□ 0.04
SFXN1-212ENST00000515791 CARM1Q86X55 608 aa15.3■□□□□ 0.04
SFXN1-212ENST00000515791 SNX32Q86XE0 403 aa15.3■□□□□ 0.04
SFXN1-212ENST00000515791 NKAIN4Q8IVV8 208 aa15.3■□□□□ 0.04
SFXN1-212ENST00000515791 C10orf53Q8N6V4 93 aa15.3■□□□□ 0.04
SFXN1-212ENST00000515791 OR6X1Q8NH79 312 aa15.3■□□□□ 0.04
SFXN1-212ENST00000515791 C10orf82Q8WW14 230 aa15.3■□□□□ 0.04
SFXN1-212ENST00000515791 FAM168AQ92567 244 aa15.3■□□□□ 0.04
SFXN1-212ENST00000515791 TNFRSF13CQ96RJ3 184 aa15.3■□□□□ 0.04
SFXN1-212ENST00000515791 DOK1Q99704 481 aa15.3■□□□□ 0.04
SFXN1-212ENST00000515791 SH3GL1Q99961 368 aa15.3■□□□□ 0.04
SFXN1-212ENST00000515791 MRGBPQ9NV56 204 aa15.3■□□□□ 0.04
SFXN1-212ENST00000515791 ZNF229Q9UJW7 825 aa15.3■□□□□ 0.04
SFXN1-212ENST00000515791 LOC100653049A0A140TA62 436 aa15.29■□□□□ 0.04
SFXN1-212ENST00000515791 KPNA4O00629 521 aaPredicted RBP15.29■□□□□ 0.04
SFXN1-212ENST00000515791 KRT34O76011 436 aa15.29■□□□□ 0.04
SFXN1-212ENST00000515791 TSPAN19P0C672 248 aa15.29■□□□□ 0.04
SFXN1-212ENST00000515791 UGT2B15P54855 530 aa15.29■□□□□ 0.04
SFXN1-212ENST00000515791 BIDP55957 195 aa15.29■□□□□ 0.04
SFXN1-212ENST00000515791 VLDLRP98155 873 aa15.29■□□□□ 0.04
SFXN1-212ENST00000515791 GUCY1A3Q02108 690 aa15.29■□□□□ 0.04
SFXN1-212ENST00000515791 LRFN4Q6PJG9 635 aa15.29■□□□□ 0.04
SFXN1-212ENST00000515791 ZNF813Q6ZN06 617 aa15.29■□□□□ 0.04
SFXN1-212ENST00000515791 SLC35D2Q76EJ3 337 aa15.29■□□□□ 0.04
SFXN1-212ENST00000515791 FGFBP3Q8TAT2 258 aa15.29■□□□□ 0.04
SFXN1-212ENST00000515791 SLC26A7Q8TE54 656 aa15.29■□□□□ 0.04
SFXN1-212ENST00000515791 PROX1Q92786 737 aa15.29■□□□□ 0.04
SFXN1-212ENST00000515791 MS4A3Q96HJ5 214 aa15.29■□□□□ 0.04
SFXN1-212ENST00000515791 FOXB1Q99853 325 aa15.29■□□□□ 0.04
SFXN1-212ENST00000515791 KCNS3Q9BQ31 491 aa15.29■□□□□ 0.04
SFXN1-212ENST00000515791 ECSITQ9BQ95 431 aa15.29■□□□□ 0.04
SFXN1-212ENST00000515791 ULBP2Q9BZM5 246 aa15.29■□□□□ 0.04
SFXN1-212ENST00000515791 NANSQ9NR45 359 aa15.29■□□□□ 0.04
SFXN1-212ENST00000515791 SH3GLB1Q9Y371 365 aa15.29■□□□□ 0.04
SFXN1-212ENST00000515791 ZNF726A6NNF4 738 aa15.28■□□□□ 0.04
SFXN1-212ENST00000515791 SERPINI2O75830 405 aa15.28■□□□□ 0.04
SFXN1-212ENST00000515791 IGF2P01344 180 aa15.28■□□□□ 0.04
SFXN1-212ENST00000515791 ZNF35P13682 527 aa15.28■□□□□ 0.04
SFXN1-212ENST00000515791 B4GALT1P15291 398 aa15.28■□□□□ 0.04
SFXN1-212ENST00000515791 FUT4P22083 530 aa15.28■□□□□ 0.04
SFXN1-212ENST00000515791 PPOXP50336 477 aa15.28■□□□□ 0.04
SFXN1-212ENST00000515791 SNRPD2P62316 118 aaKnown RBP15.28■□□□□ 0.04
SFXN1-212ENST00000515791 NPRL3Q12980 569 aa15.28■□□□□ 0.04
SFXN1-212ENST00000515791 HIST3H3Q16695 136 aa15.28■□□□□ 0.04
SFXN1-212ENST00000515791 ERICH5Q6P6B1 374 aa15.28■□□□□ 0.04
SFXN1-212ENST00000515791 VHLLQ6RSH7 139 aa15.28■□□□□ 0.04
SFXN1-212ENST00000515791 ANKS4BQ8N8V4 417 aa15.28■□□□□ 0.04
SFXN1-212ENST00000515791 IL17RDQ8NFM7 739 aa15.28■□□□□ 0.04
SFXN1-212ENST00000515791 OR6N1Q8NGY5 312 aa15.28■□□□□ 0.04
SFXN1-212ENST00000515791 SEPHS2Q99611 448 aa15.28■□□□□ 0.04
SFXN1-212ENST00000515791 MDFIQ99750 246 aa15.28■□□□□ 0.04
SFXN1-212ENST00000515791 C20orf141Q9NUB4 165 aa15.28■□□□□ 0.04
SFXN1-212ENST00000515791 GLTPQ9NZD2 209 aa15.28■□□□□ 0.04
SFXN1-212ENST00000515791 GMPR2Q9P2T1 348 aaKnown RBP15.28■□□□□ 0.04
SFXN1-212ENST00000515791 BAG5Q9UL15 447 aa15.28■□□□□ 0.04
SFXN1-212ENST00000515791 POFUT2Q9Y2G5 429 aa15.28■□□□□ 0.04
SFXN1-212ENST00000515791 FAM220BPB1ANY3 271 aa15.27■□□□□ 0.04
SFXN1-212ENST00000515791 SHOX2O60902 331 aaPredicted RBP15.27■□□□□ 0.04
SFXN1-212ENST00000515791 MT-ND1P03886 318 aa15.27■□□□□ 0.04
SFXN1-212ENST00000515791 VIMP08670 466 aaKnown RBP15.27■□□□□ 0.04
SFXN1-212ENST00000515791 CSF3P09919 207 aa15.27■□□□□ 0.04
SFXN1-212ENST00000515791 PGA4P0DJD7 388 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms