RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 M0R082 166 aa9.27□□□□□ -0.93
DDX41-216ENST00000513562 COPEO14579 308 aa9.27□□□□□ -0.93
DDX41-216ENST00000513562 AIM2O14862 343 aa9.27□□□□□ -0.93
DDX41-216ENST00000513562 CPSF4O95639 269 aaKnown RBP9.27□□□□□ -0.93
DDX41-216ENST00000513562 SERPINA5P05154 406 aa9.27□□□□□ -0.93
DDX41-216ENST00000513562 PRG2P13727 222 aa9.27□□□□□ -0.93
DDX41-216ENST00000513562 OMGP23515 440 aa9.27□□□□□ -0.93
DDX41-216ENST00000513562 AQP5P55064 265 aa9.27□□□□□ -0.93
DDX41-216ENST00000513562 TXNL4AP83876 142 aaKnown RBP9.27□□□□□ -0.93
DDX41-216ENST00000513562 EMX2Q04743 252 aa9.27□□□□□ -0.93
DDX41-216ENST00000513562 ZNF154Q13106 437 aa9.27□□□□□ -0.93
DDX41-216ENST00000513562 MAD2L1Q13257 205 aaPredicted RBP9.27□□□□□ -0.93
DDX41-216ENST00000513562 CAMK2DQ13557 499 aa9.27□□□□□ -0.93
DDX41-216ENST00000513562 LIN52Q52LA3 116 aa9.27□□□□□ -0.93
DDX41-216ENST00000513562 CARD17Q5XLA6 110 aa9.27□□□□□ -0.93
DDX41-216ENST00000513562 SYT10Q6XYQ8 523 aa9.27□□□□□ -0.93
DDX41-216ENST00000513562 C17orf107Q6ZR85 190 aa9.27□□□□□ -0.93
DDX41-216ENST00000513562 C9orf139Q6ZV77 190 aa9.27□□□□□ -0.93
DDX41-216ENST00000513562 SPATC1Q76KD6 591 aa9.27□□□□□ -0.93
DDX41-216ENST00000513562 RNF130Q86XS8 419 aa9.27□□□□□ -0.93
DDX41-216ENST00000513562 PEX5LQ8IYB4 626 aa9.27□□□□□ -0.93
DDX41-216ENST00000513562 PAQR4Q8N4S7 273 aaPredicted RBP9.27□□□□□ -0.93
DDX41-216ENST00000513562 GLB1L3Q8NCI6 653 aaPredicted RBP9.27□□□□□ -0.93
DDX41-216ENST00000513562 ZNF417Q8TAU3 575 aa9.27□□□□□ -0.93
DDX41-216ENST00000513562 SYNPRQ8TBG9 265 aa9.27□□□□□ -0.93
DDX41-216ENST00000513562 ST7LQ8TDW4 575 aa9.27□□□□□ -0.93
DDX41-216ENST00000513562 GTF3AQ92664 365 aaKnown RBP9.27□□□□□ -0.93
DDX41-216ENST00000513562 TUBGCP3Q96CW5 907 aa9.27□□□□□ -0.93
DDX41-216ENST00000513562 ELMOD3Q96FG2 381 aa9.27□□□□□ -0.93
DDX41-216ENST00000513562 ZNF587Q96SQ5 575 aaPredicted RBP9.27□□□□□ -0.93
DDX41-216ENST00000513562 FOXB1Q99853 325 aa9.27□□□□□ -0.93
DDX41-216ENST00000513562 MECRQ9BV79 373 aa9.27□□□□□ -0.93
DDX41-216ENST00000513562 DECR2Q9NUI1 292 aa9.27□□□□□ -0.93
DDX41-216ENST00000513562 UBAP1Q9NZ09 502 aa9.27□□□□□ -0.93
DDX41-216ENST00000513562 NOP53Q9NZM5 478 aaKnown RBP9.27□□□□□ -0.93
DDX41-216ENST00000513562 TESQ9UGI8 421 aaKnown RBP9.27□□□□□ -0.93
DDX41-216ENST00000513562 POFUT2Q9Y2G5 429 aa9.27□□□□□ -0.93
DDX41-216ENST00000513562 POLR3KQ9Y2Y1 108 aaPredicted RBP9.27□□□□□ -0.93
DDX41-216ENST00000513562 ISPDA4D126 451 aa9.26□□□□□ -0.93
DDX41-216ENST00000513562 TPD52L2O43399 206 aaKnown RBP9.26□□□□□ -0.93
DDX41-216ENST00000513562 IGHMP01871 453 aa9.26□□□□□ -0.93
DDX41-216ENST00000513562 FAM157BP0CG42 384 aa9.26□□□□□ -0.93
DDX41-216ENST00000513562 ZNF12P17014 697 aa9.26□□□□□ -0.93
DDX41-216ENST00000513562 NCF2P19878 526 aaPredicted RBP9.26□□□□□ -0.93
DDX41-216ENST00000513562 MAKP20794 623 aa9.26□□□□□ -0.93
DDX41-216ENST00000513562 ARRB2P32121 409 aa9.26□□□□□ -0.93
DDX41-216ENST00000513562 ERVS71-1P61550 626 aa9.26□□□□□ -0.93
DDX41-216ENST00000513562 CASP8Q14790 479 aa9.26□□□□□ -0.93
DDX41-216ENST00000513562 MAPK11Q15759 364 aa9.26□□□□□ -0.93
DDX41-216ENST00000513562 TSTQ16762 297 aaKnown RBP9.26□□□□□ -0.93
DDX41-216ENST00000513562 SMU1Q2TAY7 513 aa9.26□□□□□ -0.93
DDX41-216ENST00000513562 FAM209AQ5JX71 171 aa9.26□□□□□ -0.93
DDX41-216ENST00000513562 ZNF362Q5T0B9 420 aaPredicted RBP9.26□□□□□ -0.93
DDX41-216ENST00000513562 RNF220Q5VTB9 566 aa9.26□□□□□ -0.93
DDX41-216ENST00000513562 ATG16L1Q676U5 607 aa9.26□□□□□ -0.93
DDX41-216ENST00000513562 C16orf87Q6PH81 154 aa9.26□□□□□ -0.93
DDX41-216ENST00000513562 BRICD5Q6PL45 260 aa9.26□□□□□ -0.93
DDX41-216ENST00000513562 H1FNTQ75WM6 255 aaPredicted RBP9.26□□□□□ -0.93
DDX41-216ENST00000513562 SNX32Q86XE0 403 aa9.26□□□□□ -0.93
DDX41-216ENST00000513562 VRK2Q86Y07 508 aa9.26□□□□□ -0.93
DDX41-216ENST00000513562 KIR3DL3Q8N743 410 aa9.26□□□□□ -0.93
DDX41-216ENST00000513562 NOA1Q8NC60 698 aaKnown RBP9.26□□□□□ -0.93
DDX41-216ENST00000513562 ADPRHL1Q8NDY3 354 aa9.26□□□□□ -0.93
DDX41-216ENST00000513562 VPS37AQ8NEZ2 397 aa9.26□□□□□ -0.93
DDX41-216ENST00000513562 OR52P1PQ8NH57 321 aa9.26□□□□□ -0.93
DDX41-216ENST00000513562 ZNF519Q8TB69 540 aa9.26□□□□□ -0.93
DDX41-216ENST00000513562 CCL17Q92583 94 aa9.26□□□□□ -0.93
DDX41-216ENST00000513562 MRI1Q9BV20 369 aa9.26□□□□□ -0.93
DDX41-216ENST00000513562 MS4A7Q9GZW8 240 aaPredicted RBP9.26□□□□□ -0.93
DDX41-216ENST00000513562 BEX1Q9HBH7 125 aa9.26□□□□□ -0.93
DDX41-216ENST00000513562 B3GAT2Q9NPZ5 323 aa9.26□□□□□ -0.93
DDX41-216ENST00000513562 INSIG2Q9Y5U4 225 aa9.26□□□□□ -0.93
DDX41-216ENST00000513562 TRAPPC2LH3BP13 241 aa9.25□□□□□ -0.93
DDX41-216ENST00000513562 TIMM23O14925 209 aa9.25□□□□□ -0.93
DDX41-216ENST00000513562 OR2T1O43869 369 aa9.25□□□□□ -0.93
DDX41-216ENST00000513562 ZNF500O60304 480 aaPredicted RBP9.25□□□□□ -0.93
DDX41-216ENST00000513562 UBOX5O94941 541 aa9.25□□□□□ -0.93
DDX41-216ENST00000513562 HPRP00739 348 aa9.25□□□□□ -0.93
DDX41-216ENST00000513562 MT-ND5P03915 603 aa9.25□□□□□ -0.93
DDX41-216ENST00000513562 PATE4P0C8F1 98 aa9.25□□□□□ -0.93
DDX41-216ENST00000513562 NR2F1P10589 423 aa9.25□□□□□ -0.93
DDX41-216ENST00000513562 HLA-DOBP13765 273 aa9.25□□□□□ -0.93
DDX41-216ENST00000513562 GRPRP30550 384 aa9.25□□□□□ -0.93
DDX41-216ENST00000513562 ALDH3A1P30838 453 aa9.25□□□□□ -0.93
DDX41-216ENST00000513562 PCGF2P35227 344 aa9.25□□□□□ -0.93
DDX41-216ENST00000513562 MTNR1AP48039 350 aa9.25□□□□□ -0.93
DDX41-216ENST00000513562 ANXA11P50995 505 aaKnown RBP9.25□□□□□ -0.93
DDX41-216ENST00000513562 RAG2P55895 527 aa9.25□□□□□ -0.93
DDX41-216ENST00000513562 SLC3A1Q07837 685 aa9.25□□□□□ -0.93
DDX41-216ENST00000513562 RBBP4Q09028 425 aa9.25□□□□□ -0.93
DDX41-216ENST00000513562 MOGQ16653 247 aa9.25□□□□□ -0.93
DDX41-216ENST00000513562 FAM69AQ5T7M9 428 aa9.25□□□□□ -0.93
DDX41-216ENST00000513562 C6orf89Q6UWU4 347 aa9.25□□□□□ -0.93
DDX41-216ENST00000513562 SERPINA11Q86U17 422 aa9.25□□□□□ -0.93
DDX41-216ENST00000513562 C1QL4Q86Z23 238 aa9.25□□□□□ -0.93
DDX41-216ENST00000513562 UEVLDQ8IX04 471 aa9.25□□□□□ -0.93
DDX41-216ENST00000513562 SKA3Q8IX90 412 aa9.25□□□□□ -0.93
DDX41-216ENST00000513562 CLIP4Q8N3C7 705 aa9.25□□□□□ -0.93
DDX41-216ENST00000513562 SLC30A7Q8NEW0 376 aa9.25□□□□□ -0.93
DDX41-216ENST00000513562 OR4F5Q8NH21 305 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms