RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 INSIG2Q9Y5U4 225 aa8.88□□□□□ -0.99
CLDND1-227ENST00000513452 TRAPPC2LH3BP13 241 aa8.87□□□□□ -0.99
CLDND1-227ENST00000513452 HMGN4O00479 90 aa8.87□□□□□ -0.99
CLDND1-227ENST00000513452 PLIN3O60664 434 aa8.87□□□□□ -0.99
CLDND1-227ENST00000513452 NPIPB7O75200 414 aa8.87□□□□□ -0.99
CLDND1-227ENST00000513452 UBL3O95164 117 aa8.87□□□□□ -0.99
CLDND1-227ENST00000513452 CHRNGP07510 517 aa8.87□□□□□ -0.99
CLDND1-227ENST00000513452 PATE4P0C8F1 98 aa8.87□□□□□ -0.99
CLDND1-227ENST00000513452 OR8G3PP0DMU2 310 aa8.87□□□□□ -0.99
CLDND1-227ENST00000513452 CPA3P15088 417 aa8.87□□□□□ -0.99
CLDND1-227ENST00000513452 ZNF250P15622 560 aa8.87□□□□□ -0.99
CLDND1-227ENST00000513452 RPS4Y1P22090 263 aaKnown RBP8.87□□□□□ -0.99
CLDND1-227ENST00000513452 SEC61A1P61619 476 aaKnown RBP8.87□□□□□ -0.99
CLDND1-227ENST00000513452 COPZ1P61923 177 aa8.87□□□□□ -0.99
CLDND1-227ENST00000513452 RELBQ01201 579 aa8.87□□□□□ -0.99
CLDND1-227ENST00000513452 RBBP4Q09028 425 aa8.87□□□□□ -0.99
CLDND1-227ENST00000513452 HNRNPA0Q13151 305 aaKnown RBP8.87□□□□□ -0.99
CLDND1-227ENST00000513452 TAF9Q16594 264 aa8.87□□□□□ -0.99
CLDND1-227ENST00000513452 XKR7Q5GH72 579 aa8.87□□□□□ -0.99
CLDND1-227ENST00000513452 SYT10Q6XYQ8 523 aa8.87□□□□□ -0.99
CLDND1-227ENST00000513452 ANKRD46Q86W74 232 aa8.87□□□□□ -0.99
CLDND1-227ENST00000513452 ZNF584Q8IVC4 421 aa8.87□□□□□ -0.99
CLDND1-227ENST00000513452 ZNF440Q8IYI8 595 aa8.87□□□□□ -0.99
CLDND1-227ENST00000513452 PAQR4Q8N4S7 273 aaPredicted RBP8.87□□□□□ -0.99
CLDND1-227ENST00000513452 OR52E2Q8NGJ4 325 aa8.87□□□□□ -0.99
CLDND1-227ENST00000513452 MFSD8Q8NHS3 518 aa8.87□□□□□ -0.99
CLDND1-227ENST00000513452 FAM110DQ8TAY7 271 aaPredicted RBP8.87□□□□□ -0.99
CLDND1-227ENST00000513452 PTDSS2Q9BVG9 487 aa8.87□□□□□ -0.99
CLDND1-227ENST00000513452 TSPYL1Q9H0U9 437 aa8.87□□□□□ -0.99
CLDND1-227ENST00000513452 DENND2DQ9H6A0 471 aaPredicted RBP8.87□□□□□ -0.99
CLDND1-227ENST00000513452 B3GAT2Q9NPZ5 323 aa8.87□□□□□ -0.99
CLDND1-227ENST00000513452 C1RLQ9NZP8 487 aa8.87□□□□□ -0.99
CLDND1-227ENST00000513452 MARCOQ9UEW3 520 aaPredicted RBP8.87□□□□□ -0.99
CLDND1-227ENST00000513452 TBK1Q9UHD2 729 aa8.87□□□□□ -0.99
CLDND1-227ENST00000513452 FBXL3Q9UKT7 428 aa8.87□□□□□ -0.99
CLDND1-227ENST00000513452 A0A096LPI6 279 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 A0A1W2PPM1 405 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 CLPSL1A2RUU4 121 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 C3orf80F5H4A9 247 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 M0R082 166 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 RNASET2O00584 256 aaKnown RBP8.86□□□□□ -0.99
CLDND1-227ENST00000513452 ZNF500O60304 480 aaPredicted RBP8.86□□□□□ -0.99
CLDND1-227ENST00000513452 CPSF4O95639 269 aaKnown RBP8.86□□□□□ -0.99
CLDND1-227ENST00000513452 NGFP01138 241 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 C1QCP02747 245 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 MT-ND5P03915 603 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 G6PDP11413 515 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 CCL2P13500 99 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 SELEP16581 610 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 NCF2P19878 526 aaPredicted RBP8.86□□□□□ -0.99
CLDND1-227ENST00000513452 DRD4P21917 467 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 UQCRC2P22695 453 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 CHI3L1P36222 383 aaPredicted RBP8.86□□□□□ -0.99
CLDND1-227ENST00000513452 ACAA2P42765 397 aaKnown RBP8.86□□□□□ -0.99
CLDND1-227ENST00000513452 ZNF81P51508 661 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 CAMK2DQ13557 499 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 BEAN1Q3B7T3 259 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 UGT3A2Q3SY77 523 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 CCDC153Q494R4 210 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 C6orf136Q5SQH8 315 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 FIP1L1Q6UN15 594 aaKnown RBP8.86□□□□□ -0.99
CLDND1-227ENST00000513452 C9orf139Q6ZV77 190 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 ZNF627Q7L945 461 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 C10orf107Q8IVU9 208 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 C20orf196Q8IYI0 205 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 SLC30A7Q8NEW0 376 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 FGFBP3Q8TAT2 258 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 ZNF417Q8TAU3 575 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 STK35Q8TDR2 534 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 MZB1Q8WU39 189 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 IFT81Q8WYA0 676 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 C11orf40Q8WZ69 217 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 NEURL3Q96EH8 262 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 C3orf30Q96M34 536 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 TRNT1Q96Q11 434 aaKnown RBP8.86□□□□□ -0.99
CLDND1-227ENST00000513452 ZNF587Q96SQ5 575 aaPredicted RBP8.86□□□□□ -0.99
CLDND1-227ENST00000513452 FOXB1Q99853 325 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 EMC6Q9BV81 110 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 ULBP2Q9BZM5 246 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 MARCH7Q9H992 704 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 CDH20Q9HBT6 801 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 NPHS2Q9NP85 383 aa8.86□□□□□ -0.99
CLDND1-227ENST00000513452 PSMC3IPQ9P2W1 217 aaPredicted RBP8.86□□□□□ -0.99
CLDND1-227ENST00000513452 TRAV40A0A0B4J280 105 aa8.85□□□□□ -0.99
CLDND1-227ENST00000513452 CDHR4A6H8M9 788 aa8.85□□□□□ -0.99
CLDND1-227ENST00000513452 G3V4G9 280 aa8.85□□□□□ -0.99
CLDND1-227ENST00000513452 AIM2O14862 343 aa8.85□□□□□ -0.99
CLDND1-227ENST00000513452 SPRY3O43610 288 aa8.85□□□□□ -0.99
CLDND1-227ENST00000513452 UBOX5O94941 541 aa8.85□□□□□ -0.99
CLDND1-227ENST00000513452 NDUFA7O95182 113 aa8.85□□□□□ -0.99
CLDND1-227ENST00000513452 SERPINA5P05154 406 aa8.85□□□□□ -0.99
CLDND1-227ENST00000513452 DBIP07108 87 aaKnown RBP8.85□□□□□ -0.99
CLDND1-227ENST00000513452 ABHD2P08910 425 aa8.85□□□□□ -0.99
CLDND1-227ENST00000513452 SBK2P0C263 348 aa8.85□□□□□ -0.99
CLDND1-227ENST00000513452 PRG2P13727 222 aa8.85□□□□□ -0.99
CLDND1-227ENST00000513452 EGR4Q05215 589 aa8.85□□□□□ -0.99
CLDND1-227ENST00000513452 SLC3A1Q07837 685 aa8.85□□□□□ -0.99
CLDND1-227ENST00000513452 HLXQ14774 488 aaPredicted RBP8.85□□□□□ -0.99
CLDND1-227ENST00000513452 FAM209AQ5JX71 171 aa8.85□□□□□ -0.99
CLDND1-227ENST00000513452 ZNF836Q6ZNA1 936 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms