RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 OR5L2Q8NGL0 311 aa10.39□□□□□ -0.75
TCOF1-211ENST00000513346 PRR14Q9BWN1 585 aa10.39□□□□□ -0.75
TCOF1-211ENST00000513346 K7EPK0 472 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 IGLV3-25P01717 112 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 OR8G3PP0DMU2 310 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 SLC6A12P48065 614 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 ARL6IP1Q15041 203 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 EBPQ15125 230 aaKnown RBP10.38□□□□□ -0.75
TCOF1-211ENST00000513346 AWAT2Q6E213 333 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 GDF7Q7Z4P5 450 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 FAM71E2Q8N5Q1 922 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 MAFAQ8NHW3 353 aaPredicted RBP10.38□□□□□ -0.75
TCOF1-211ENST00000513346 WFDC5Q8TCV5 224 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 CWH43Q9H720 699 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 ADAM29Q9UKF5 820 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 KIR2DS5A0A0G2JLQ3 304 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 A0A0G2JNG1 304 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 KIR2DS3K7RE56 304 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 HOXB5P09067 269 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 RD3LP0DJH9 198 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 TAS2R20P59543 309 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 UBE2MP61081 183 aaKnown RBP10.38□□□□□ -0.75
TCOF1-211ENST00000513346 CBFBQ13951 182 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 KIR2DS3Q14952 304 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 KIR2DS5Q14953 304 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 SLC9A3R2Q15599 337 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 ZNF385BQ569K4 471 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 ALG10Q5BKT4 473 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 SKA3Q8IX90 412 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 TMEM255BQ8WV15 326 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 TMEM106AQ96A25 262 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 OR52A5Q9H2C5 316 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 TMEM231Q9H6L2 316 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 CYB5R1Q9UHQ9 305 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 SIT1Q9Y3P8 196 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 TTC28Q96AY4 2481 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 ADAMTSL1Q8N6G6 1762 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 ACY1Q03154 408 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 IRF3Q14653 427 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 LGALSLQ3ZCW2 172 aaPredicted RBP10.38□□□□□ -0.75
TCOF1-211ENST00000513346 C1orf53Q5VUE5 145 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 TMEM65Q6PI78 240 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 ZNF704Q6ZNC4 412 aaPredicted RBP10.38□□□□□ -0.75
TCOF1-211ENST00000513346 KIAA0907Q7Z7F0 614 aaPredicted RBP10.38□□□□□ -0.75
TCOF1-211ENST00000513346 BVESQ8NE79 360 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 BPIFCQ8NFQ6 507 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 WDR89Q96FK6 387 aaPredicted RBP10.38□□□□□ -0.75
TCOF1-211ENST00000513346 C16orf58Q96GQ5 468 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 INTS14Q96SY0 518 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 ZFC3H1O60293 1989 aaKnown RBP10.38□□□□□ -0.75
TCOF1-211ENST00000513346 M0QYG6 137 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 HRO43593 1189 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 SLC2A5P22732 501 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 GNRHRP30968 328 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 CLDN6P56747 220 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 YBX1P67809 324 aaKnown RBP10.38□□□□□ -0.75
TCOF1-211ENST00000513346 ARHGAP19Q14CB8 494 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 BATFQ16520 125 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 KCNRGQ8N5I3 272 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 OR51D1Q8NGF3 324 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 OR52E1Q8NGJ3 308 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 BCL7CQ8WUZ0 217 aaPredicted RBP10.38□□□□□ -0.75
TCOF1-211ENST00000513346 TMED6Q8WW62 240 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 SORCS2Q96PQ0 1159 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 PDCD1LG2Q9BQ51 273 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 SYT3Q9BQG1 590 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 STEAP1Q9UHE8 339 aa10.38□□□□□ -0.75
TCOF1-211ENST00000513346 ZNF850A8MQ14 1090 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 IGHA2P01877 340 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 IRS1P35568 1242 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 SERPINF1P36955 418 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 FAAP20Q6NZ36 180 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 FRMD1Q8N878 549 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 LILRB1Q8NHL6 650 aaPredicted RBP10.37□□□□□ -0.75
TCOF1-211ENST00000513346 NPIPA5A0A0B4J1W7 369 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 A0A0B4J203 849 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 MCRIP1C9JLW8 97 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 NPIPA7E9PJI5 369 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 CCSO14618 274 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 MPIG6BO95866 241 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 NPIPA8P0DM63 369 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 GALP22466 123 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 PTAFRP25105 342 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 CD80P33681 288 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 PRLHRP49683 370 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 CAV2P51636 162 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 HMGA2P52926 109 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 MFSD13AQ14CX5 517 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 TMEM201Q5SNT2 666 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 LYSMD4Q5XG99 296 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 SPICQ8N5J4 248 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 SLC30A7Q8NEW0 376 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 TM4SF18Q96CE8 201 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 TNFRSF13CQ96RJ3 184 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 TESQ9UGI8 421 aaKnown RBP10.37□□□□□ -0.75
TCOF1-211ENST00000513346 MCM3APO60318 1980 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 TMEM212A6NML5 194 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 GLAP06280 429 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 C1SP09871 688 aa10.37□□□□□ -0.75
TCOF1-211ENST00000513346 CXCL3P19876 107 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms