RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 ASPHD2Q6ICH7 369 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 CCDC137Q6PK04 289 aaKnown RBP4.07□□□□□ -1.76
HTT-211ENST00000513326 LINGO2Q7L985 606 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 SPATA21Q7Z572 469 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 FAM9CQ8IZT9 166 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 OR2L13Q8N349 312 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 PAQR4Q8N4S7 273 aaPredicted RBP4.07□□□□□ -1.76
HTT-211ENST00000513326 KIR3DL3Q8N743 410 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 B4GALNT2Q8NHY0 566 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 ST8SIA4Q92187 359 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 APH1AQ96BI3 265 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 RNFT2Q96EX2 444 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 OR5B2Q96R09 309 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 CCT8L2Q96SF2 557 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 GPR22Q99680 433 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 RBM4BQ9BQ04 359 aaKnown RBP4.07□□□□□ -1.76
HTT-211ENST00000513326 TM2D2Q9BX73 214 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 RAB1BQ9H0U4 201 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 SLITRK2Q9H156 845 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 PRDM13Q9H4Q3 707 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 Q9N2J8 555 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 SLC35C2Q9NQQ7 365 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 SLC7A10Q9NS82 523 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 ZNF275Q9NSD4 429 aaPredicted RBP4.07□□□□□ -1.76
HTT-211ENST00000513326 GIN1Q9NXP7 522 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 TAS2R9Q9NYW1 312 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 SENP1Q9P0U3 644 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 MYEF2Q9P2K5 600 aaKnown RBP4.07□□□□□ -1.76
HTT-211ENST00000513326 ZNF225Q9UK10 706 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 DYNC2H1Q8NCM8 4307 aaKnown RBP4.06□□□□□ -1.76
HTT-211ENST00000513326 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 FAM90A7PA6NKC0 464 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 FAM90A22PA8MWA6 464 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 FAM90A12PA8MX19 464 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 FAM90A23PA8MXZ1 464 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 MYO1GB0I1T2 1018 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 UGDHO60701 494 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 BCAS2O75934 225 aaPredicted RBP4.06□□□□□ -1.76
HTT-211ENST00000513326 KCNK2O95069 426 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 LGI1O95970 557 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 NUDT3O95989 172 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 HLA-DQA2P01906 255 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 GFAPP14136 432 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 DDX5P17844 614 aaKnown RBP4.06□□□□□ -1.76
HTT-211ENST00000513326 PCGF2P35227 344 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 GP5P40197 560 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 ARL1P40616 181 aaPredicted RBP4.06□□□□□ -1.76
HTT-211ENST00000513326 MAP3K8P41279 467 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 ALDH3B1P43353 468 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 GPR6P46095 362 aaPredicted RBP4.06□□□□□ -1.76
HTT-211ENST00000513326 FNTAP49354 379 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 KHKP50053 298 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 SLC12A2P55011 1212 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 BAMBIQ13145 260 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 FRG1Q14331 258 aaKnown RBP4.06□□□□□ -1.76
HTT-211ENST00000513326 DUSP5Q16690 384 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 ANKRD26P1Q6NSI1 321 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 CASP12Q6UXS9 341 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 OLIG3Q7RTU3 272 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 PAGE2Q7Z2X7 111 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 LRP11Q86VZ4 500 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 KLBQ86Z14 1044 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 SLC43A2Q8N370 569 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 NOA1Q8NC60 698 aaKnown RBP4.06□□□□□ -1.76
HTT-211ENST00000513326 FBXO36Q8NEA4 188 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 TRIM58Q8NG06 486 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 OR4F6Q8NGB9 312 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 RFWD2Q8NHY2 731 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 OSR1Q8TAX0 266 aaPredicted RBP4.06□□□□□ -1.76
HTT-211ENST00000513326 FAM110DQ8TAY7 271 aaPredicted RBP4.06□□□□□ -1.76
HTT-211ENST00000513326 STAG3L4Q8TBR4 150 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 BCAS4Q8TDM0 211 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 GPR151Q8TDV0 419 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 GPR119Q8TDV5 335 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 TRPC4APQ8TEL6 797 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 C2CD4CQ8TF44 421 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 C16orf78Q8WTQ4 265 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 CKAP2Q8WWK9 683 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 GTF3AQ92664 365 aaKnown RBP4.06□□□□□ -1.76
HTT-211ENST00000513326 TMIGD2Q96BF3 282 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 ERP27Q96DN0 273 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 RNF125Q96EQ8 232 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 GIMAP5Q96F15 307 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 C16orf58Q96GQ5 468 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 ARL5BQ96KC2 179 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 SLC38A2Q96QD8 506 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 RBBP8Q99708 897 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 BAG1Q99933 345 aaPredicted RBP4.06□□□□□ -1.76
HTT-211ENST00000513326 CITED1Q99966 193 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 FUZQ9BT04 418 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 FAIM2Q9BWQ8 316 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 KRTAP9-3Q9BYQ3 159 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 OR11A1Q9GZK7 315 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 CTDSP1Q9GZU7 261 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 PAIP1Q9H074 479 aaKnown RBP4.06□□□□□ -1.76
HTT-211ENST00000513326 GLIPR2Q9H4G4 154 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 DYNLRB1Q9NP97 96 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 TIGARQ9NQ88 270 aa4.06□□□□□ -1.76
HTT-211ENST00000513326 DDX18Q9NVP1 670 aaKnown RBP4.06□□□□□ -1.76
HTT-211ENST00000513326 CPSF2Q9P2I0 782 aaKnown RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms