RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 CCDC71Q8IV32 467 aaPredicted RBP11.13□□□□□ -0.63
PDPN-210ENST00000513143 MCEMP1Q8IX19 187 aa11.13□□□□□ -0.63
PDPN-210ENST00000513143 TUSC5Q8IXB3 177 aa11.13□□□□□ -0.63
PDPN-210ENST00000513143 OR6X1Q8NH79 312 aa11.13□□□□□ -0.63
PDPN-210ENST00000513143 TMEM45BQ96B21 275 aa11.13□□□□□ -0.63
PDPN-210ENST00000513143 RASD2Q96D21 266 aa11.13□□□□□ -0.63
PDPN-210ENST00000513143 GMPPAQ96IJ6 420 aaPredicted RBP11.13□□□□□ -0.63
PDPN-210ENST00000513143 ADAD1Q96M93 576 aaKnown RBP11.13□□□□□ -0.63
PDPN-210ENST00000513143 TTYH2Q9BSA4 534 aa11.13□□□□□ -0.63
PDPN-210ENST00000513143 CMC2Q9NRP2 79 aa11.13□□□□□ -0.63
PDPN-210ENST00000513143 TVP23BQ9NYZ1 205 aa11.13□□□□□ -0.63
PDPN-210ENST00000513143 EMC3Q9P0I2 261 aa11.13□□□□□ -0.63
PDPN-210ENST00000513143 RAB26Q9ULW5 256 aa11.13□□□□□ -0.63
PDPN-210ENST00000513143 RCE1Q9Y256 329 aa11.13□□□□□ -0.63
PDPN-210ENST00000513143 GMPPBQ9Y5P6 360 aa11.13□□□□□ -0.63
PDPN-210ENST00000513143 NBASA2RRP1 2371 aa11.13□□□□□ -0.63
PDPN-210ENST00000513143 FREM1Q5H8C1 2179 aa11.13□□□□□ -0.63
PDPN-210ENST00000513143 ESPL1Q14674 2120 aa11.13□□□□□ -0.63
PDPN-210ENST00000513143 TEX13CA0A0J9YWL9 993 aa11.12□□□□□ -0.63
PDPN-210ENST00000513143 SLC35F4A4IF30 521 aa11.12□□□□□ -0.63
PDPN-210ENST00000513143 ZNF432O94892 652 aa11.12□□□□□ -0.63
PDPN-210ENST00000513143 GLI4P10075 376 aa11.12□□□□□ -0.63
PDPN-210ENST00000513143 HIST1H1CP16403 213 aaKnown RBP11.12□□□□□ -0.63
PDPN-210ENST00000513143 CEACAM8P31997 349 aaPredicted RBP11.12□□□□□ -0.63
PDPN-210ENST00000513143 NTF4P34130 210 aa11.12□□□□□ -0.63
PDPN-210ENST00000513143 ACVR1BP36896 505 aa11.12□□□□□ -0.63
PDPN-210ENST00000513143 CA7P43166 264 aa11.12□□□□□ -0.63
PDPN-210ENST00000513143 CASP6P55212 293 aa11.12□□□□□ -0.63
PDPN-210ENST00000513143 BIDP55957 195 aa11.12□□□□□ -0.63
PDPN-210ENST00000513143 CLDN17P56750 224 aa11.12□□□□□ -0.63
PDPN-210ENST00000513143 CDC42P60953 191 aa11.12□□□□□ -0.63
PDPN-210ENST00000513143 EFNB1P98172 346 aa11.12□□□□□ -0.63
PDPN-210ENST00000513143 TLE1Q04724 770 aa11.12□□□□□ -0.63
PDPN-210ENST00000513143 IL18R1Q13478 541 aa11.12□□□□□ -0.63
PDPN-210ENST00000513143 KRR1Q13601 381 aaKnown RBP11.12□□□□□ -0.63
PDPN-210ENST00000513143 MELKQ14680 651 aa11.12□□□□□ -0.63
PDPN-210ENST00000513143 SNAPC1Q16533 368 aa11.12□□□□□ -0.63
PDPN-210ENST00000513143 MESTQ5EB52 335 aa11.12□□□□□ -0.63
PDPN-210ENST00000513143 ZNF691Q5VV52 312 aa11.12□□□□□ -0.63
PDPN-210ENST00000513143 CASP12Q6UXS9 341 aa11.12□□□□□ -0.63
PDPN-210ENST00000513143 C3P1Q6ZMU1 363 aa11.12□□□□□ -0.63
PDPN-210ENST00000513143 USP51Q70EK9 711 aa11.12□□□□□ -0.63
PDPN-210ENST00000513143 HDDC2Q7Z4H3 204 aa11.12□□□□□ -0.63
PDPN-210ENST00000513143 WDFY1Q8IWB7 410 aa11.12□□□□□ -0.63
PDPN-210ENST00000513143 ZNF843Q8N446 348 aa11.12□□□□□ -0.63
PDPN-210ENST00000513143 RPRMLQ8N4K4 120 aa11.12□□□□□ -0.63
PDPN-210ENST00000513143 GALNT11Q8NCW6 608 aa11.12□□□□□ -0.63
PDPN-210ENST00000513143 FAM81AQ8TBF8 368 aa11.12□□□□□ -0.63
PDPN-210ENST00000513143 TRUB1Q8WWH5 349 aaKnown RBP11.12□□□□□ -0.63
PDPN-210ENST00000513143 ZNF775Q96BV0 537 aaPredicted RBP11.12□□□□□ -0.63
PDPN-210ENST00000513143 ZFP3Q96NJ6 502 aa11.12□□□□□ -0.63
PDPN-210ENST00000513143 SLC38A2Q96QD8 506 aa11.12□□□□□ -0.63
PDPN-210ENST00000513143 DDOQ99489 341 aa11.12□□□□□ -0.63
PDPN-210ENST00000513143 EMC6Q9BV81 110 aa11.12□□□□□ -0.63
PDPN-210ENST00000513143 PRRG3Q9BZD7 231 aa11.12□□□□□ -0.63
PDPN-210ENST00000513143 KLHL21Q9UJP4 597 aa11.12□□□□□ -0.63
PDPN-210ENST00000513143 CLEC4AQ9UMR7 237 aa11.12□□□□□ -0.63
PDPN-210ENST00000513143 NOSIPQ9Y314 301 aaKnown RBP11.12□□□□□ -0.63
PDPN-210ENST00000513143 CFAP46Q8IYW2 2715 aa11.12□□□□□ -0.63
PDPN-210ENST00000513143 ZNF726A6NNF4 738 aa11.11□□□□□ -0.63
PDPN-210ENST00000513143 RIIAD1A6NNX1 92 aa11.11□□□□□ -0.63
PDPN-210ENST00000513143 CENPBD1B2RD01 187 aa11.11□□□□□ -0.63
PDPN-210ENST00000513143 E9PLN8 166 aa11.11□□□□□ -0.63
PDPN-210ENST00000513143 XKRYO14609 159 aa11.11□□□□□ -0.63
PDPN-210ENST00000513143 ARHGEF9O43307 516 aa11.11□□□□□ -0.63
PDPN-210ENST00000513143 AKAP8O43823 692 aaKnown RBP11.11□□□□□ -0.63
PDPN-210ENST00000513143 PRKYO43930 277 aa11.11□□□□□ -0.63
PDPN-210ENST00000513143 TRMUO75648 421 aaKnown RBP11.11□□□□□ -0.63
PDPN-210ENST00000513143 C1QL1O75973 258 aa11.11□□□□□ -0.63
PDPN-210ENST00000513143 TOXO94900 526 aa11.11□□□□□ -0.63
PDPN-210ENST00000513143 SLC2A10O95528 541 aa11.11□□□□□ -0.63
PDPN-210ENST00000513143 CLIC3O95833 236 aa11.11□□□□□ -0.63
PDPN-210ENST00000513143 IFNGP01579 166 aa11.11□□□□□ -0.63
PDPN-210ENST00000513143 CRHP06850 196 aa11.11□□□□□ -0.63
PDPN-210ENST00000513143 STSP08842 583 aa11.11□□□□□ -0.63
PDPN-210ENST00000513143 GNAO1P09471 354 aa11.11□□□□□ -0.63
PDPN-210ENST00000513143 ACADSP16219 412 aa11.11□□□□□ -0.63
PDPN-210ENST00000513143 AGTR1P30556 359 aa11.11□□□□□ -0.63
PDPN-210ENST00000513143 CDKN2AP42771 156 aaKnown RBP11.11□□□□□ -0.63
PDPN-210ENST00000513143 PCYT1AP49585 367 aa11.11□□□□□ -0.63
PDPN-210ENST00000513143 RUNX1T1Q06455 604 aa11.11□□□□□ -0.63
PDPN-210ENST00000513143 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.11□□□□□ -0.63
PDPN-210ENST00000513143 MRPL49Q13405 166 aaKnown RBP11.11□□□□□ -0.63
PDPN-210ENST00000513143 EIF2S3LQ2VIR3 472 aaKnown RBP11.11□□□□□ -0.63
PDPN-210ENST00000513143 TMEM201Q5SNT2 666 aa11.11□□□□□ -0.63
PDPN-210ENST00000513143 MYO7BQ6PIF6 2116 aa11.11□□□□□ -0.63
PDPN-210ENST00000513143 PTCHD4Q6ZW05 846 aa11.11□□□□□ -0.63
PDPN-210ENST00000513143 AAED1Q7RTV5 226 aa11.11□□□□□ -0.63
PDPN-210ENST00000513143 ADCK1Q86TW2 530 aa11.11□□□□□ -0.63
PDPN-210ENST00000513143 TMEM123Q8N131 208 aa11.11□□□□□ -0.63
PDPN-210ENST00000513143 DEPDC4Q8N2C3 294 aa11.11□□□□□ -0.63
PDPN-210ENST00000513143 NPEPL1Q8NDH3 523 aa11.11□□□□□ -0.63
PDPN-210ENST00000513143 OR52E2Q8NGJ4 325 aa11.11□□□□□ -0.63
PDPN-210ENST00000513143 OR4K13Q8NH42 304 aa11.11□□□□□ -0.63
PDPN-210ENST00000513143 HDAC2Q92769 488 aaKnown RBP11.11□□□□□ -0.63
PDPN-210ENST00000513143 INTS12Q96CB8 462 aaKnown RBP11.11□□□□□ -0.63
PDPN-210ENST00000513143 SLC25A44Q96H78 314 aaPredicted RBP11.11□□□□□ -0.63
PDPN-210ENST00000513143 MUS81Q96NY9 551 aa11.11□□□□□ -0.63
PDPN-210ENST00000513143 OR2M2Q96R28 347 aa11.11□□□□□ -0.63
PDPN-210ENST00000513143 SNX18Q96RF0 628 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms