RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 ARF1P84077 181 aaKnown RBP11.93□□□□□ -0.5
SPCS3-204ENST00000513139 FUT5Q11128 374 aa11.93□□□□□ -0.5
SPCS3-204ENST00000513139 NPRL3Q12980 569 aa11.93□□□□□ -0.5
SPCS3-204ENST00000513139 GTDC1Q4AE62 458 aa11.93□□□□□ -0.5
SPCS3-204ENST00000513139 ZNF311Q5JNZ3 666 aa11.93□□□□□ -0.5
SPCS3-204ENST00000513139 ZNF621Q6ZSS3 439 aa11.93□□□□□ -0.5
SPCS3-204ENST00000513139 EPHX4Q8IUS5 362 aa11.93□□□□□ -0.5
SPCS3-204ENST00000513139 GTF2H4Q92759 462 aa11.93□□□□□ -0.5
SPCS3-204ENST00000513139 YIPF5Q969M3 257 aa11.93□□□□□ -0.5
SPCS3-204ENST00000513139 ITCHQ96J02 903 aa11.93□□□□□ -0.5
SPCS3-204ENST00000513139 PANX1Q96RD7 426 aa11.93□□□□□ -0.5
SPCS3-204ENST00000513139 TAPBPLQ9BX59 468 aa11.93□□□□□ -0.5
SPCS3-204ENST00000513139 MYLK2Q9H1R3 596 aa11.93□□□□□ -0.5
SPCS3-204ENST00000513139 SLAMF8Q9P0V8 285 aa11.93□□□□□ -0.5
SPCS3-204ENST00000513139 RCE1Q9Y256 329 aa11.93□□□□□ -0.5
SPCS3-204ENST00000513139 CFAP73A6NFT4 308 aa11.92□□□□□ -0.5
SPCS3-204ENST00000513139 RFXANKO14593 260 aa11.92□□□□□ -0.5
SPCS3-204ENST00000513139 PLPP2O43688 288 aa11.92□□□□□ -0.5
SPCS3-204ENST00000513139 MPZL1O95297 269 aa11.92□□□□□ -0.5
SPCS3-204ENST00000513139 UQCRC2P22695 453 aa11.92□□□□□ -0.5
SPCS3-204ENST00000513139 EPS8Q12929 822 aa11.92□□□□□ -0.5
SPCS3-204ENST00000513139 MSMPQ1L6U9 139 aa11.92□□□□□ -0.5
SPCS3-204ENST00000513139 MMEL1Q495T6 779 aa11.92□□□□□ -0.5
SPCS3-204ENST00000513139 C6orf10Q5SRN2 563 aa11.92□□□□□ -0.5
SPCS3-204ENST00000513139 GKAP1Q5VSY0 366 aaPredicted RBP11.92□□□□□ -0.5
SPCS3-204ENST00000513139 MDP1Q86V88 176 aa11.92□□□□□ -0.5
SPCS3-204ENST00000513139 TREML1Q86YW5 311 aa11.92□□□□□ -0.5
SPCS3-204ENST00000513139 POU5F2Q8N7G0 328 aa11.92□□□□□ -0.5
SPCS3-204ENST00000513139 RAB8BQ92930 207 aa11.92□□□□□ -0.5
SPCS3-204ENST00000513139 RAB39BQ96DA2 213 aa11.92□□□□□ -0.5
SPCS3-204ENST00000513139 PAIP1Q9H074 479 aaKnown RBP11.92□□□□□ -0.5
SPCS3-204ENST00000513139 ZNF665Q9H7R5 613 aa11.92□□□□□ -0.5
SPCS3-204ENST00000513139 RMND5AQ9H871 391 aa11.92□□□□□ -0.5
SPCS3-204ENST00000513139 ZMAT3Q9HA38 289 aaKnown RBP11.92□□□□□ -0.5
SPCS3-204ENST00000513139 ADPRHL2Q9NX46 363 aa11.92□□□□□ -0.5
SPCS3-204ENST00000513139 ZNF281Q9Y2X9 895 aa11.92□□□□□ -0.5
SPCS3-204ENST00000513139 CAPN7Q9Y6W3 813 aa11.92□□□□□ -0.5
SPCS3-204ENST00000513139 ZNF503-AS2A6NEH8 195 aa11.91□□□□□ -0.5
SPCS3-204ENST00000513139 AGAP5A6NIR3 686 aa11.91□□□□□ -0.5
SPCS3-204ENST00000513139 A8MVM7 634 aa11.91□□□□□ -0.5
SPCS3-204ENST00000513139 FBP2O00757 339 aa11.91□□□□□ -0.5
SPCS3-204ENST00000513139 ZNF432O94892 652 aa11.91□□□□□ -0.5
SPCS3-204ENST00000513139 PRSS23O95084 383 aa11.91□□□□□ -0.5
SPCS3-204ENST00000513139 FSHBP01225 129 aa11.91□□□□□ -0.5
SPCS3-204ENST00000513139 CHRM4P08173 479 aa11.91□□□□□ -0.5
SPCS3-204ENST00000513139 ZNF35P13682 527 aa11.91□□□□□ -0.5
SPCS3-204ENST00000513139 ADRA2CP18825 462 aa11.91□□□□□ -0.5
SPCS3-204ENST00000513139 TCN1P20061 433 aaPredicted RBP11.91□□□□□ -0.5
SPCS3-204ENST00000513139 RPS23P62266 143 aaKnown RBP11.91□□□□□ -0.5
SPCS3-204ENST00000513139 HPCAP84074 193 aa11.91□□□□□ -0.5
SPCS3-204ENST00000513139 GNA13Q14344 377 aa11.91□□□□□ -0.5
SPCS3-204ENST00000513139 GPAT3Q53EU6 434 aa11.91□□□□□ -0.5
SPCS3-204ENST00000513139 DCAF12L2Q5VW00 463 aa11.91□□□□□ -0.5
SPCS3-204ENST00000513139 PRAMEF8Q5VWM4 474 aa11.91□□□□□ -0.5
SPCS3-204ENST00000513139 PRAMEF7Q5VXH5 474 aa11.91□□□□□ -0.5
SPCS3-204ENST00000513139 TNFAIP8L2Q6P589 184 aaPredicted RBP11.91□□□□□ -0.5
SPCS3-204ENST00000513139 MSANTD1Q6ZTZ1 278 aa11.91□□□□□ -0.5
SPCS3-204ENST00000513139 SNX32Q86XE0 403 aa11.91□□□□□ -0.5
SPCS3-204ENST00000513139 ZNF440Q8IYI8 595 aa11.91□□□□□ -0.5
SPCS3-204ENST00000513139 SYT14Q8NB59 555 aa11.91□□□□□ -0.5
SPCS3-204ENST00000513139 PLPP7Q8NBV4 271 aa11.91□□□□□ -0.5
SPCS3-204ENST00000513139 BCAS4Q8TDM0 211 aa11.91□□□□□ -0.5
SPCS3-204ENST00000513139 DVL3Q92997 716 aaPredicted RBP11.91□□□□□ -0.5
SPCS3-204ENST00000513139 SLC35A5Q9BS91 424 aa11.91□□□□□ -0.5
SPCS3-204ENST00000513139 SLITRK2Q9H156 845 aa11.91□□□□□ -0.5
SPCS3-204ENST00000513139 GPR35Q9HC97 309 aa11.91□□□□□ -0.5
SPCS3-204ENST00000513139 B3GNT2Q9NY97 397 aa11.91□□□□□ -0.5
SPCS3-204ENST00000513139 ZNF346Q9UL40 294 aaKnown RBP11.91□□□□□ -0.5
SPCS3-204ENST00000513139 NDUFAF1Q9Y375 327 aa11.91□□□□□ -0.5
SPCS3-204ENST00000513139 NOX1Q9Y5S8 564 aa11.91□□□□□ -0.5
SPCS3-204ENST00000513139 A0A096LPI6 279 aa11.9□□□□□ -0.5
SPCS3-204ENST00000513139 NDUFAB1O14561 156 aa11.9□□□□□ -0.5
SPCS3-204ENST00000513139 ANGPT2O15123 496 aa11.9□□□□□ -0.5
SPCS3-204ENST00000513139 FRS3O43559 492 aa11.9□□□□□ -0.5
SPCS3-204ENST00000513139 SLC43A1O75387 559 aa11.9□□□□□ -0.5
SPCS3-204ENST00000513139 DEAF1O75398 565 aaPredicted RBP11.9□□□□□ -0.5
SPCS3-204ENST00000513139 NCR1O76036 304 aa11.9□□□□□ -0.5
SPCS3-204ENST00000513139 ANP32DO95626 131 aa11.9□□□□□ -0.5
SPCS3-204ENST00000513139 TFPTP0C1Z6 253 aa11.9□□□□□ -0.5
SPCS3-204ENST00000513139 PRTN3P24158 256 aa11.9□□□□□ -0.5
SPCS3-204ENST00000513139 CHI3L1P36222 383 aaPredicted RBP11.9□□□□□ -0.5
SPCS3-204ENST00000513139 ALDH3B1P43353 468 aa11.9□□□□□ -0.5
SPCS3-204ENST00000513139 LRRC74AQ0VAA2 488 aa11.9□□□□□ -0.5
SPCS3-204ENST00000513139 ZP4Q12836 540 aa11.9□□□□□ -0.5
SPCS3-204ENST00000513139 CEACAM16Q2WEN9 425 aa11.9□□□□□ -0.5
SPCS3-204ENST00000513139 TRMT5Q32P41 509 aaKnown RBP11.9□□□□□ -0.5
SPCS3-204ENST00000513139 SAXO2Q658L1 398 aa11.9□□□□□ -0.5
SPCS3-204ENST00000513139 DLEU7Q6UYE1 221 aa11.9□□□□□ -0.5
SPCS3-204ENST00000513139 RBMS3Q6XE24 437 aaKnown RBP11.9□□□□□ -0.5
SPCS3-204ENST00000513139 HMGN2P46Q86SG4 172 aa11.9□□□□□ -0.5
SPCS3-204ENST00000513139 MSRB3Q8IXL7 192 aa11.9□□□□□ -0.5
SPCS3-204ENST00000513139 GPR137CQ8N3F9 429 aa11.9□□□□□ -0.5
SPCS3-204ENST00000513139 CCDC197Q8NCU1 140 aa11.9□□□□□ -0.5
SPCS3-204ENST00000513139 RNF217Q8TC41 542 aa11.9□□□□□ -0.5
SPCS3-204ENST00000513139 PNPT1Q8TCS8 783 aaKnown RBP11.9□□□□□ -0.5
SPCS3-204ENST00000513139 TRNT1Q96Q11 434 aaKnown RBP11.9□□□□□ -0.5
SPCS3-204ENST00000513139 SYT3Q9BQG1 590 aa11.9□□□□□ -0.5
SPCS3-204ENST00000513139 DENND2DQ9H6A0 471 aaPredicted RBP11.9□□□□□ -0.5
SPCS3-204ENST00000513139 MTHFD2LQ9H903 347 aaPredicted RBP11.9□□□□□ -0.5
SPCS3-204ENST00000513139 UNKLQ9H9P5 680 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms