RNA–Protein interactions for RNA: ENST00000513024.5

LIMCH1-218, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-218ENST00000513024 ACSM4P0C7M7 580 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 SDHAP31040 664 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 ACOT6Q3I5F7 207 aaPredicted RBP8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 LY6G5CQ5SRR4 150 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 OPN5Q6U736 354 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 MAMDC4Q6UXC1 1216 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 IL20RBQ6UXL0 311 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 Q6ZN92 141 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 GDPD3Q7L5L3 318 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 SIAH3Q8IW03 269 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 SLC43A2Q8N370 569 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 OR13D1Q8NGV5 346 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 OR2G2Q8NGZ5 317 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 OR5B3Q8NH48 314 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 ADGRG7Q96K78 797 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 PLEKHJ1Q9NW61 149 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 PCDHGA9Q9Y5G4 932 aaKnown RBP8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 A0A1B0GTW7 788 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 A0A1W2PPQ1 181 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 BET1O15155 118 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 AKR7A2O43488 359 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 CNMDO75829 334 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 PPP1R3DO95685 299 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 SFTPCP11686 197 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 CD68P34810 354 aaPredicted RBP8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 GPR143P51810 404 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 PCBP4P57723 403 aaKnown RBP8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 RPS18P62269 152 aaKnown RBP8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 ASAH1Q13510 395 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 NHSL2Q5HYW2 709 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 KIAA0895LQ68EN5 471 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 HBMQ6B0K9 141 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 RTL6Q6ICC9 239 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 SLC18B1Q6NT16 456 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 RANBP10Q6VN20 620 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 ACOT7LQ6ZUV0 252 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 GCNT2Q8N0V5 402 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 EXD3Q8N9H8 876 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 KDF1Q8NAX2 398 aaPredicted RBP8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 ABHD5Q8WTS1 349 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 MIB2Q96AX9 1013 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 SAT2Q96F10 170 aaPredicted RBP8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 C20orf85Q9H1P6 137 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 ZNF281Q9Y2X9 895 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 A0A0U1RQS6 177 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 TEX50A0A1B0GTY4 177 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 H0YIV9 168 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 M0R1X1 148 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 HRH2P25021 359 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 FOLR3P41439 243 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 CCR9P51686 369 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 ZNF154Q13106 437 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 SFRP5Q5T4F7 317 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 TVP23CQ96ET8 276 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 MMABQ96EY8 250 aaPredicted RBP8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 TP53RKQ96S44 253 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 CMSS1Q9BQ75 279 aaKnown RBP8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 SLC25A21Q9BQT8 299 aaPredicted RBP8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 DPH7Q9BTV6 452 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 OLAHQ9NV23 265 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 KCND3Q9UK17 655 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 DDX60LQ5H9U9 1706 aaKnown RBP8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 C1orf226A1L170 272 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 SHISA7A6NL88 538 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 SOCS5O75159 536 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 TPOP07202 933 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 CTRB1P17538 263 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 F2RL1P55085 397 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 WNT7BP56706 349 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 UBE2NLQ5JXB2 153 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 CTRB2Q6GPI1 263 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 FRMPD2BQ6IN97 320 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 ZNF66Q6ZN08 573 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 S100A7AQ86SG5 101 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 NECAP1Q8NC96 275 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 VN1R2Q8NFZ6 395 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 OR2G3Q8NGZ4 309 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 RTP4Q96DX8 246 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 SEMA6CQ9H3T2 930 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 ZCCHC4Q9H5U6 513 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 SIDT1Q9NXL6 827 aaKnown RBP8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 USP22Q9UPT9 525 aa8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 STRAPQ9Y3F4 350 aaKnown RBP8.11□□□□□ -1.11
LIMCH1-218ENST00000513024 TMEM200CA6NKL6 621 aa8.1□□□□□ -1.11
LIMCH1-218ENST00000513024 FAM183AA6NL82 134 aa8.1□□□□□ -1.11
LIMCH1-218ENST00000513024 ZNF623O75123 536 aa8.1□□□□□ -1.11
LIMCH1-218ENST00000513024 MPC1LP0DKB6 136 aa8.1□□□□□ -1.11
LIMCH1-218ENST00000513024 CD37P11049 281 aa8.1□□□□□ -1.11
LIMCH1-218ENST00000513024 PSMB10P40306 273 aa8.1□□□□□ -1.11
LIMCH1-218ENST00000513024 TAS2R38P59533 333 aa8.1□□□□□ -1.11
LIMCH1-218ENST00000513024 ARG2P78540 354 aa8.1□□□□□ -1.11
LIMCH1-218ENST00000513024 LTBQ06643 244 aa8.1□□□□□ -1.11
LIMCH1-218ENST00000513024 ARL16Q0P5N6 197 aa8.1□□□□□ -1.11
LIMCH1-218ENST00000513024 SELENBP1Q13228 472 aa8.1□□□□□ -1.11
LIMCH1-218ENST00000513024 IAH1Q2TAA2 248 aaPredicted RBP8.1□□□□□ -1.11
LIMCH1-218ENST00000513024 PRRT3Q5FWE3 981 aa8.1□□□□□ -1.11
LIMCH1-218ENST00000513024 COL5A1-AS1Q5SY13 56 aa8.1□□□□□ -1.11
LIMCH1-218ENST00000513024 OR2G6Q5TZ20 316 aa8.1□□□□□ -1.11
LIMCH1-218ENST00000513024 DLK2Q6UY11 383 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms