RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 H2AFY2Q9P0M6 372 aaPredicted RBP6.71□□□□□ -1.34
CPNE4-208ENST00000511604 HDGFL3Q9Y3E1 203 aa6.71□□□□□ -1.34
CPNE4-208ENST00000511604 MTCH2Q9Y6C9 303 aa6.71□□□□□ -1.34
CPNE4-208ENST00000511604 LOC285556D6RIA3 1793 aa6.71□□□□□ -1.34
CPNE4-208ENST00000511604 VCANP13611 3396 aa6.71□□□□□ -1.34
CPNE4-208ENST00000511604 RALGAPA2Q2PPJ7 1873 aa6.71□□□□□ -1.34
CPNE4-208ENST00000511604 IRAK2O43187 625 aa6.71□□□□□ -1.34
CPNE4-208ENST00000511604 OR2C1O95371 312 aa6.71□□□□□ -1.34
CPNE4-208ENST00000511604 CLDN9O95484 217 aa6.71□□□□□ -1.34
CPNE4-208ENST00000511604 ETHE1O95571 254 aa6.71□□□□□ -1.34
CPNE4-208ENST00000511604 C8GP07360 202 aa6.71□□□□□ -1.34
CPNE4-208ENST00000511604 CTSHP09668 335 aa6.71□□□□□ -1.34
CPNE4-208ENST00000511604 ST6GAL1P15907 406 aa6.71□□□□□ -1.34
CPNE4-208ENST00000511604 TBPP20226 339 aa6.71□□□□□ -1.34
CPNE4-208ENST00000511604 EPHA1P21709 976 aa6.71□□□□□ -1.34
CPNE4-208ENST00000511604 RENBPP51606 427 aa6.71□□□□□ -1.34
CPNE4-208ENST00000511604 CDH11P55287 796 aa6.71□□□□□ -1.34
CPNE4-208ENST00000511604 RPS23P62266 143 aaKnown RBP6.71□□□□□ -1.34
CPNE4-208ENST00000511604 CDK5Q00535 292 aa6.71□□□□□ -1.34
CPNE4-208ENST00000511604 SP3Q02447 781 aa6.71□□□□□ -1.34
CPNE4-208ENST00000511604 DDX39BQ13838 428 aaKnown RBP6.71□□□□□ -1.34
CPNE4-208ENST00000511604 UBE2V2Q15819 145 aa6.71□□□□□ -1.34
CPNE4-208ENST00000511604 ZNF674Q2M3X9 581 aa6.71□□□□□ -1.34
CPNE4-208ENST00000511604 HENMT1Q5T8I9 393 aaKnown RBP6.71□□□□□ -1.34
CPNE4-208ENST00000511604 ZNF697Q5TEC3 545 aa6.71□□□□□ -1.34
CPNE4-208ENST00000511604 ABLIM2Q6H8Q1 611 aa6.71□□□□□ -1.34
CPNE4-208ENST00000511604 ZNF529Q6P280 563 aa6.71□□□□□ -1.34
CPNE4-208ENST00000511604 SZRD1Q7Z422 152 aa6.71□□□□□ -1.34
CPNE4-208ENST00000511604 GLT6D1Q7Z4J2 308 aa6.71□□□□□ -1.34
CPNE4-208ENST00000511604 PXKQ7Z7A4 578 aa6.71□□□□□ -1.34
CPNE4-208ENST00000511604 PAQR4Q8N4S7 273 aaPredicted RBP6.71□□□□□ -1.34
CPNE4-208ENST00000511604 OR4K15Q8NH41 348 aa6.71□□□□□ -1.34
CPNE4-208ENST00000511604 ZNF671Q8TAW3 534 aa6.71□□□□□ -1.34
CPNE4-208ENST00000511604 PPP1R1CQ8WVI7 109 aa6.71□□□□□ -1.34
CPNE4-208ENST00000511604 HPSE2Q8WWQ2 592 aa6.71□□□□□ -1.34
CPNE4-208ENST00000511604 RGP1Q92546 391 aaPredicted RBP6.71□□□□□ -1.34
CPNE4-208ENST00000511604 MS4A4AQ96JQ5 239 aa6.71□□□□□ -1.34
CPNE4-208ENST00000511604 CIPCQ9C0C6 399 aa6.71□□□□□ -1.34
CPNE4-208ENST00000511604 SMG9Q9H0W8 520 aaKnown RBP6.71□□□□□ -1.34
CPNE4-208ENST00000511604 LPAR2Q9HBW0 351 aa6.71□□□□□ -1.34
CPNE4-208ENST00000511604 LANCL2Q9NS86 450 aa6.71□□□□□ -1.34
CPNE4-208ENST00000511604 SEMA5BQ9P283 1151 aa6.71□□□□□ -1.34
CPNE4-208ENST00000511604 TRPC4Q9UBN4 977 aa6.71□□□□□ -1.34
CPNE4-208ENST00000511604 A0A0D9SEW6 157 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 ZC3H12DA2A288 527 aaKnown RBP6.7□□□□□ -1.34
CPNE4-208ENST00000511604 TMEM235A6NFC5 223 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 FAM171A2A8MVW0 826 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 TRDCB7Z8K6 153 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 TMEM238C9JI98 176 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 H7C4K7 107 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 TBX18O95935 607 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 IGLV3-25P01717 112 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 IGHA1P01876 353 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 CD82P27701 267 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 CD1CP29017 333 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 PTH2RP49190 550 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 GPR15P49685 360 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 TAF6P49848 677 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 RAB1AP62820 205 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 CBFBQ13951 182 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 KHDRBS2Q5VWX1 349 aaKnown RBP6.7□□□□□ -1.34
CPNE4-208ENST00000511604 TNFAIP8L2Q6P589 184 aaPredicted RBP6.7□□□□□ -1.34
CPNE4-208ENST00000511604 ARL9Q6T311 187 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 ENPP7Q6UWV6 458 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 WDR88Q6ZMY6 472 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 SYT12Q8IV01 421 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 LRRC56Q8IYG6 542 aaPredicted RBP6.7□□□□□ -1.34
CPNE4-208ENST00000511604 GPC2Q8N158 579 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 STEAP2Q8NFT2 490 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 OR5M8Q8NGP6 311 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 MRGPRDQ8TDS7 321 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 RRNAD1Q96FB5 475 aaKnown RBP6.7□□□□□ -1.34
CPNE4-208ENST00000511604 ALKBH3Q96Q83 286 aaPredicted RBP6.7□□□□□ -1.34
CPNE4-208ENST00000511604 OR5B2Q96R09 309 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 TRIB3Q96RU7 358 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 CNN2Q99439 309 aaKnown RBP6.7□□□□□ -1.34
CPNE4-208ENST00000511604 ZNF426Q9BUY5 554 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 DNAJC4Q9NNZ3 241 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 GNG8Q9UK08 70 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 ATG4BQ9Y4P1 393 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 MMP24Q9Y5R2 645 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 WIF1Q9Y5W5 379 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 POMT1Q9Y6A1 747 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 SLCO1B1Q9Y6L6 691 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 COL11A1P12107 1806 aaPredicted RBP6.7□□□□□ -1.34
CPNE4-208ENST00000511604 A0A0G2JN53 185 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 A0A1B0GTI1 187 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 ZNF705GA8MUZ8 300 aaPredicted RBP6.7□□□□□ -1.34
CPNE4-208ENST00000511604 DCTN6O00399 190 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 WNT10BO00744 389 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 XRCC3O43542 346 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 OR1F1O43749 312 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 PPP1R3DO95685 299 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 CH25HO95992 272 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 PTNP21246 168 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 EDNRBP24530 442 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 FAUP35544 74 aaKnown RBP6.7□□□□□ -1.34
CPNE4-208ENST00000511604 LPAR6P43657 344 aa6.7□□□□□ -1.34
CPNE4-208ENST00000511604 PPM1FP49593 454 aaPredicted RBP6.7□□□□□ -1.34
CPNE4-208ENST00000511604 P2RX1P51575 399 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms