RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 GSG1LQ6UXU4 331 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 OR51S1Q8NGJ8 323 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 NSMAFQ92636 917 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 CCDC74AQ96AQ1 378 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 MOGAT1Q96PD6 335 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 KLHDC3Q9BQ90 382 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 TWSG1Q9GZX9 223 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 MKKSQ9NPJ1 570 aaPredicted RBP10.82□□□□□ -0.68
UBE3D-206ENST00000505226 CACNA1IQ9P0X4 2223 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 NPIPB9F8W1W9 429 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 KCNJ13O60928 360 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 PPP3CBP16298 524 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 C4BPBP20851 252 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 ENPP2Q13822 863 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 GPR18Q14330 331 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 ENPP7Q6UWV6 458 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 FAM122BQ7Z309 247 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 SLC43A2Q8N370 569 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 CAMKVQ8NCB2 501 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 OR51D1Q8NGF3 324 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 POLE3Q9NRF9 147 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 ACTR10Q9NZ32 417 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 ZNF230Q9UIE0 474 aaPredicted RBP10.82□□□□□ -0.68
UBE3D-206ENST00000505226 XRCC3O43542 346 aa10.81□□□□□ -0.68
UBE3D-206ENST00000505226 SPDEFO95238 335 aa10.81□□□□□ -0.68
UBE3D-206ENST00000505226 ADH1BP00325 375 aa10.81□□□□□ -0.68
UBE3D-206ENST00000505226 IFNA16P05015 189 aa10.81□□□□□ -0.68
UBE3D-206ENST00000505226 MRPS10P82664 201 aaKnown RBP10.81□□□□□ -0.68
UBE3D-206ENST00000505226 RUNX3Q13761 415 aa10.81□□□□□ -0.68
UBE3D-206ENST00000505226 KIR2DS3Q14952 304 aa10.81□□□□□ -0.68
UBE3D-206ENST00000505226 RBMS2Q15434 407 aaKnown RBP10.81□□□□□ -0.68
UBE3D-206ENST00000505226 NKAIN2Q5VXU1 208 aa10.81□□□□□ -0.68
UBE3D-206ENST00000505226 LRFN4Q6PJG9 635 aa10.81□□□□□ -0.68
UBE3D-206ENST00000505226 PMM1Q92871 262 aa10.81□□□□□ -0.68
UBE3D-206ENST00000505226 MRPS24Q96EL2 167 aaKnown RBP10.81□□□□□ -0.68
UBE3D-206ENST00000505226 ZFYVE21Q9BQ24 234 aa10.81□□□□□ -0.68
UBE3D-206ENST00000505226 TTYH1Q9H313 450 aaPredicted RBP10.81□□□□□ -0.68
UBE3D-206ENST00000505226 SRA1Q9HD15 236 aaKnown RBP10.81□□□□□ -0.68
UBE3D-206ENST00000505226 PRDM9Q9NQV7 894 aa10.81□□□□□ -0.68
UBE3D-206ENST00000505226 TBC1D3DA0A087WVF3 549 aa10.81□□□□□ -0.68
UBE3D-206ENST00000505226 TBC1D3IA0A087WXS9 549 aa10.81□□□□□ -0.68
UBE3D-206ENST00000505226 TBC1D3LB9A6J9 549 aa10.81□□□□□ -0.68
UBE3D-206ENST00000505226 KRBOX1C9JBD0 128 aa10.81□□□□□ -0.68
UBE3D-206ENST00000505226 PLRG1O43660 514 aaKnown RBP10.81□□□□□ -0.68
UBE3D-206ENST00000505226 RDH16O75452 317 aa10.81□□□□□ -0.68
UBE3D-206ENST00000505226 RBBP9O75884 186 aa10.81□□□□□ -0.68
UBE3D-206ENST00000505226 TBC1D3HP0C7X1 549 aa10.81□□□□□ -0.68
UBE3D-206ENST00000505226 ATXN8OSP0DMR3 200 aa10.81□□□□□ -0.68
UBE3D-206ENST00000505226 ACTR1BP42025 376 aa10.81□□□□□ -0.68
UBE3D-206ENST00000505226 MAZP56270 477 aaKnown RBP10.81□□□□□ -0.68
UBE3D-206ENST00000505226 ACTR1AP61163 376 aa10.81□□□□□ -0.68
UBE3D-206ENST00000505226 TBC1D3CQ6IPX1 549 aa10.81□□□□□ -0.68
UBE3D-206ENST00000505226 TBC1D3Q8IZP1 549 aaPredicted RBP10.81□□□□□ -0.68
UBE3D-206ENST00000505226 PRSS35Q8N3Z0 413 aa10.81□□□□□ -0.68
UBE3D-206ENST00000505226 ZNF454Q8N9F8 522 aa10.81□□□□□ -0.68
UBE3D-206ENST00000505226 OR5M9Q8NGP3 310 aa10.81□□□□□ -0.68
UBE3D-206ENST00000505226 C3orf49Q96BT1 292 aa10.81□□□□□ -0.68
UBE3D-206ENST00000505226 ADAD1Q96M93 576 aaKnown RBP10.81□□□□□ -0.68
UBE3D-206ENST00000505226 VSTM2LQ96N03 204 aa10.81□□□□□ -0.68
UBE3D-206ENST00000505226 LMF1Q96S06 567 aa10.81□□□□□ -0.68
UBE3D-206ENST00000505226 AMELYQ99218 206 aa10.81□□□□□ -0.68
UBE3D-206ENST00000505226 LMF2Q9BU23 707 aaKnown RBP10.81□□□□□ -0.68
UBE3D-206ENST00000505226 LDAHQ9H6V9 325 aa10.81□□□□□ -0.68
UBE3D-206ENST00000505226 WDR76Q9H967 626 aa10.81□□□□□ -0.68
UBE3D-206ENST00000505226 ZNF337Q9Y3M9 751 aa10.81□□□□□ -0.68
UBE3D-206ENST00000505226 A6NCN8 305 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 URADA6NGE7 173 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 OR4C45A6NMZ5 311 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 F5H5P2 479 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 CTAG2O75638 210 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 LDOC1O95751 146 aaPredicted RBP10.8□□□□□ -0.68
UBE3D-206ENST00000505226 F13BP05160 661 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 FBXO45P0C2W1 286 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 MPGP29372 298 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 SORDQ00796 357 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 GK2Q14410 553 aaPredicted RBP10.8□□□□□ -0.68
UBE3D-206ENST00000505226 UBXN2BQ14CS0 331 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 ASPHD2Q6ICH7 369 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 LRRC75AQ8NAA5 344 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 OR8S1Q8NH09 359 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 SLC22A18Q96BI1 424 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 DPYSL5Q9BPU6 564 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 PBX4Q9BYU1 374 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 LMAN2LQ9H0V9 348 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 WDR13Q9H1Z4 485 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 ETV7Q9Y603 341 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 LAMA1P25391 3075 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 TRBV5-7A0A0A0MS05 114 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 TRAV14DV4A0A0A6YYC5 116 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 GGT3PA6NGU5 568 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 CDC123O75794 336 aaPredicted RBP10.8□□□□□ -0.68
UBE3D-206ENST00000505226 RASGRP1O95267 797 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 HPP00738 406 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 CD3DP04234 171 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 ITGA5P08648 1049 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 ARHGDIBP52566 201 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 ZNF141Q15928 474 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 SLC16A9Q7RTY1 509 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 CDH26Q8IXH8 852 aa10.8□□□□□ -0.68
UBE3D-206ENST00000505226 GATSQ8NAP1 163 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms