RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 UGT1A7Q9HAW7 530 aa2.31□□□□□ -2.04
SUB1-204ENST00000504016 UGT1A10Q9HAW8 530 aa2.31□□□□□ -2.04
SUB1-204ENST00000504016 UGT1A8Q9HAW9 530 aa2.31□□□□□ -2.04
SUB1-204ENST00000504016 CTPS2Q9NRF8 586 aa2.31□□□□□ -2.04
SUB1-204ENST00000504016 EPS15L1Q9UBC2 864 aa2.31□□□□□ -2.04
SUB1-204ENST00000504016 ZNF629Q9UEG4 869 aaPredicted RBP2.31□□□□□ -2.04
SUB1-204ENST00000504016 ZNF222Q9UK12 451 aa2.31□□□□□ -2.04
SUB1-204ENST00000504016 SCN2AQ99250 2005 aa2.3□□□□□ -2.04
SUB1-204ENST00000504016 A0A1B0GVL5 298 aa2.3□□□□□ -2.04
SUB1-204ENST00000504016 XKRYO14609 159 aa2.3□□□□□ -2.04
SUB1-204ENST00000504016 KMOO15229 486 aa2.3□□□□□ -2.04
SUB1-204ENST00000504016 MAGEB3O15480 346 aa2.3□□□□□ -2.04
SUB1-204ENST00000504016 MTX2O75431 263 aa2.3□□□□□ -2.04
SUB1-204ENST00000504016 RHOXF2BP0C7M4 288 aa2.3□□□□□ -2.04
SUB1-204ENST00000504016 UBTFL1P0CB47 393 aaPredicted RBP2.3□□□□□ -2.04
SUB1-204ENST00000504016 ZNF286BP0CG31 522 aa2.3□□□□□ -2.04
SUB1-204ENST00000504016 PGAM1P18669 254 aa2.3□□□□□ -2.04
SUB1-204ENST00000504016 ERVK-25P63136 954 aa2.3□□□□□ -2.04
SUB1-204ENST00000504016 IRX3P78415 501 aaPredicted RBP2.3□□□□□ -2.04
SUB1-204ENST00000504016 GNMTQ14749 295 aa2.3□□□□□ -2.04
SUB1-204ENST00000504016 LY6EQ16553 131 aa2.3□□□□□ -2.04
SUB1-204ENST00000504016 COA6Q5JTJ3 125 aaKnown RBP2.3□□□□□ -2.04
SUB1-204ENST00000504016 LY6G6FQ5SQ64 297 aa2.3□□□□□ -2.04
SUB1-204ENST00000504016 ATAD3BQ5T9A4 648 aa2.3□□□□□ -2.04
SUB1-204ENST00000504016 ENPP6Q6UWR7 440 aa2.3□□□□□ -2.04
SUB1-204ENST00000504016 UTS2BQ765I0 119 aa2.3□□□□□ -2.04
SUB1-204ENST00000504016 PGAM4Q8N0Y7 254 aa2.3□□□□□ -2.04
SUB1-204ENST00000504016 PUSL1Q8N0Z8 303 aaKnown RBP2.3□□□□□ -2.04
SUB1-204ENST00000504016 ZNF709Q8N972 641 aa2.3□□□□□ -2.04
SUB1-204ENST00000504016 VN1R2Q8NFZ6 395 aa2.3□□□□□ -2.04
SUB1-204ENST00000504016 OR5D13Q8NGL4 314 aa2.3□□□□□ -2.04
SUB1-204ENST00000504016 SYNPRQ8TBG9 265 aa2.3□□□□□ -2.04
SUB1-204ENST00000504016 TCEANC2Q96MN5 208 aa2.3□□□□□ -2.04
SUB1-204ENST00000504016 PANX2Q96RD6 677 aa2.3□□□□□ -2.04
SUB1-204ENST00000504016 RARRES2Q99969 163 aa2.3□□□□□ -2.04
SUB1-204ENST00000504016 ECSITQ9BQ95 431 aa2.3□□□□□ -2.04
SUB1-204ENST00000504016 SLC40A1Q9NP59 571 aa2.3□□□□□ -2.04
SUB1-204ENST00000504016 ADAM28Q9UKQ2 775 aa2.3□□□□□ -2.04
SUB1-204ENST00000504016 KIAA1257Q9ULG3 409 aa2.3□□□□□ -2.04
SUB1-204ENST00000504016 CLEC4AQ9UMR7 237 aa2.3□□□□□ -2.04
SUB1-204ENST00000504016 PACSIN2Q9UNF0 486 aaPredicted RBP2.3□□□□□ -2.04
SUB1-204ENST00000504016 FANCIQ9NVI1 1328 aa2.3□□□□□ -2.04
SUB1-204ENST00000504016 ATP10AO60312 1499 aa2.3□□□□□ -2.04
SUB1-204ENST00000504016 PHF3Q92576 2039 aaKnown RBP2.29□□□□□ -2.04
SUB1-204ENST00000504016 CEMIPQ8WUJ3 1361 aa2.29□□□□□ -2.04
SUB1-204ENST00000504016 TRAV26-1A0A087WT03 109 aa2.29□□□□□ -2.04
SUB1-204ENST00000504016 A0A1B0GVI7 797 aa2.29□□□□□ -2.04
SUB1-204ENST00000504016 A0A1W2PP18 115 aa2.29□□□□□ -2.04
SUB1-204ENST00000504016 IGHV3-43DP0DP04 118 aa2.29□□□□□ -2.04
SUB1-204ENST00000504016 ATP5C1P36542 298 aaKnown RBP2.29□□□□□ -2.04
SUB1-204ENST00000504016 GRIA1P42261 906 aa2.29□□□□□ -2.04
SUB1-204ENST00000504016 CCT3P49368 545 aaKnown RBP2.29□□□□□ -2.04
SUB1-204ENST00000504016 SUB1P53999 127 aaKnown RBP eCLIP2.29□□□□□ -2.042e-25■■■■■ 50.5
SUB1-204ENST00000504016 RPS21P63220 83 aaKnown RBP2.29□□□□□ -2.04
SUB1-204ENST00000504016 TMEM255AQ5JRV8 349 aa2.29□□□□□ -2.04
SUB1-204ENST00000504016 VAX1Q5SQQ9 334 aa2.29□□□□□ -2.04
SUB1-204ENST00000504016 TRIM40Q6P9F5 258 aa2.29□□□□□ -2.04
SUB1-204ENST00000504016 LYPD2Q6UXB3 125 aa2.29□□□□□ -2.04
SUB1-204ENST00000504016 TRIM69Q86WT6 500 aa2.29□□□□□ -2.04
SUB1-204ENST00000504016 ZNF679Q8IYX0 411 aa2.29□□□□□ -2.04
SUB1-204ENST00000504016 OR2G2Q8NGZ5 317 aa2.29□□□□□ -2.04
SUB1-204ENST00000504016 OR5W2Q8NH69 310 aa2.29□□□□□ -2.04
SUB1-204ENST00000504016 UBALD1Q8TB05 177 aa2.29□□□□□ -2.04
SUB1-204ENST00000504016 FRZBQ92765 325 aa2.29□□□□□ -2.04
SUB1-204ENST00000504016 RBMXL1Q96E39 390 aaKnown RBP2.29□□□□□ -2.04
SUB1-204ENST00000504016 TSGA13Q96PP4 275 aa2.29□□□□□ -2.04
SUB1-204ENST00000504016 RIOK1Q9BRS2 568 aaKnown RBP2.29□□□□□ -2.04
SUB1-204ENST00000504016 NDFIP1Q9BT67 221 aa2.29□□□□□ -2.04
SUB1-204ENST00000504016 TMEM43Q9BTV4 400 aa2.29□□□□□ -2.04
SUB1-204ENST00000504016 TRIM62Q9BVG3 475 aa2.29□□□□□ -2.04
SUB1-204ENST00000504016 RANBP3Q9H6Z4 567 aaPredicted RBP2.29□□□□□ -2.04
SUB1-204ENST00000504016 ZNF430Q9H8G1 570 aaPredicted RBP2.29□□□□□ -2.04
SUB1-204ENST00000504016 GORASP2Q9H8Y8 452 aa2.29□□□□□ -2.04
SUB1-204ENST00000504016 NOX3Q9HBY0 568 aa2.29□□□□□ -2.04
SUB1-204ENST00000504016 MRPL47Q9HD33 250 aaKnown RBP2.29□□□□□ -2.04
SUB1-204ENST00000504016 MRPS7Q9Y2R9 242 aaKnown RBP2.29□□□□□ -2.04
SUB1-204ENST00000504016 YTHDF2Q9Y5A9 579 aaKnown RBP2.29□□□□□ -2.04
SUB1-204ENST00000504016 CCDC182A6NF36 153 aa2.28□□□□□ -2.04
SUB1-204ENST00000504016 B4GALT5O43286 388 aa2.28□□□□□ -2.04
SUB1-204ENST00000504016 OR7A10O76100 309 aa2.28□□□□□ -2.04
SUB1-204ENST00000504016 BGLAPP02818 100 aa2.28□□□□□ -2.04
SUB1-204ENST00000504016 GAPDHP04406 335 aaKnown RBP2.28□□□□□ -2.04
SUB1-204ENST00000504016 TCN1P20061 433 aaPredicted RBP2.28□□□□□ -2.04
SUB1-204ENST00000504016 OPRD1P41143 372 aa2.28□□□□□ -2.04
SUB1-204ENST00000504016 GPR6P46095 362 aaPredicted RBP2.28□□□□□ -2.04
SUB1-204ENST00000504016 NPBWR2P48146 333 aa2.28□□□□□ -2.04
SUB1-204ENST00000504016 CRYBB1P53674 252 aaPredicted RBP2.28□□□□□ -2.04
SUB1-204ENST00000504016 ENPEPQ07075 957 aa2.28□□□□□ -2.04
SUB1-204ENST00000504016 SHHQ15465 462 aa2.28□□□□□ -2.04
SUB1-204ENST00000504016 EXOC3L2Q2M3D2 409 aa2.28□□□□□ -2.04
SUB1-204ENST00000504016 TTLL9Q3SXZ7 439 aa2.28□□□□□ -2.04
SUB1-204ENST00000504016 ABCA11PQ4W5N1 156 aa2.28□□□□□ -2.04
SUB1-204ENST00000504016 GALNT17Q6IS24 598 aa2.28□□□□□ -2.04
SUB1-204ENST00000504016 KDM7AQ6ZMT4 941 aa2.28□□□□□ -2.04
SUB1-204ENST00000504016 Q6ZPB1 254 aaPredicted RBP2.28□□□□□ -2.04
SUB1-204ENST00000504016 OR1L4Q8NGR5 311 aa2.28□□□□□ -2.04
SUB1-204ENST00000504016 CD300LFQ8TDQ1 290 aa2.28□□□□□ -2.04
SUB1-204ENST00000504016 OR8B4Q96RC9 309 aa2.28□□□□□ -2.04
SUB1-204ENST00000504016 SORT1Q99523 831 aa2.28□□□□□ -2.04
SUB1-204ENST00000504016 GON7Q9BXV9 100 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms