RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 CRISP1P54107 249 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 STX17P56962 302 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 RIPK4P57078 832 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 UBE2MP61081 183 aaKnown RBP5.1□□□□□ -1.59
BRCA1-224ENST00000497488 DMC1Q14565 340 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 GNMTQ14749 295 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 TSC22D1Q15714 1073 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 CARD16Q5EG05 197 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 UTF1Q5T230 341 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 RNLSQ5VYX0 342 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 FAM199XQ6PEV8 388 aaPredicted RBP5.1□□□□□ -1.59
BRCA1-224ENST00000497488 ZNF790Q6PG37 636 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 TMPRSS11AQ6ZMR5 421 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 OR2T33Q8NG76 320 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 LYPD6BQ8NI32 183 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 UBA3Q8TBC4 463 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 PCNPQ8WW12 178 aaKnown RBP5.1□□□□□ -1.59
BRCA1-224ENST00000497488 IL1F10Q8WWZ1 152 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 MRPS31Q92665 395 aaKnown RBP5.1□□□□□ -1.59
BRCA1-224ENST00000497488 CDKL2Q92772 493 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 UFD1Q92890 307 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 APH1AQ96BI3 265 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 RNF170Q96K19 258 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 ADGRG7Q96K78 797 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 CNPY3Q9BT09 278 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 PIGUQ9H490 435 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 REEP4Q9H6H4 257 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 ANKHQ9HCJ1 492 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 MEPEQ9NQ76 525 aaPredicted RBP5.1□□□□□ -1.59
BRCA1-224ENST00000497488 LSM7Q9UK45 103 aaKnown RBP5.1□□□□□ -1.59
BRCA1-224ENST00000497488 TMCO1Q9UM00 188 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 ERVW-1Q9UQF0 538 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 SAR1BQ9Y6B6 198 aa5.1□□□□□ -1.59
BRCA1-224ENST00000497488 ZNF521Q96K83 1311 aa5.09□□□□□ -1.59
BRCA1-224ENST00000497488 CLEC18AA5D8T8 446 aa5.09□□□□□ -1.59
BRCA1-224ENST00000497488 MGAT4DA6NG13 374 aa5.09□□□□□ -1.59
BRCA1-224ENST00000497488 PP2D1A8MPX8 630 aa5.09□□□□□ -1.59
BRCA1-224ENST00000497488 RNF212BA8MTL3 300 aa5.09□□□□□ -1.59
BRCA1-224ENST00000497488 BLOC1S5-TXNDC5H3BN57 136 aa5.09□□□□□ -1.59
BRCA1-224ENST00000497488 TFECO14948 347 aaPredicted RBP5.09□□□□□ -1.59
BRCA1-224ENST00000497488 XRCC2O43543 280 aa5.09□□□□□ -1.59
BRCA1-224ENST00000497488 TYROBPO43914 113 aa5.09□□□□□ -1.59
BRCA1-224ENST00000497488 PRKYO43930 277 aa5.09□□□□□ -1.59
BRCA1-224ENST00000497488 OXSR1O95747 527 aaPredicted RBP5.09□□□□□ -1.59
BRCA1-224ENST00000497488 FADS2O95864 444 aaKnown RBP5.09□□□□□ -1.59
BRCA1-224ENST00000497488 CD160O95971 181 aa5.09□□□□□ -1.59
BRCA1-224ENST00000497488 BGNP21810 368 aa5.09□□□□□ -1.59
BRCA1-224ENST00000497488 FCGR2CP31995 323 aa5.09□□□□□ -1.59
BRCA1-224ENST00000497488 NBL1P41271 181 aa5.09□□□□□ -1.59
BRCA1-224ENST00000497488 TNFSF9P41273 254 aa5.09□□□□□ -1.59
BRCA1-224ENST00000497488 PRKXP51817 358 aa5.09□□□□□ -1.59
BRCA1-224ENST00000497488 DVL1P1P54792 670 aaPredicted RBP5.09□□□□□ -1.59
BRCA1-224ENST00000497488 RPS15AP62244 130 aaKnown RBP5.09□□□□□ -1.59
BRCA1-224ENST00000497488 ZNF33AQ06730 810 aa5.09□□□□□ -1.59
BRCA1-224ENST00000497488 ARL16Q0P5N6 197 aa5.09□□□□□ -1.59
BRCA1-224ENST00000497488 BCL2A1Q16548 175 aa5.09□□□□□ -1.59
BRCA1-224ENST00000497488 RPEL1Q2QD12 228 aa5.09□□□□□ -1.59
BRCA1-224ENST00000497488 SEL1L2Q5TEA6 688 aa5.09□□□□□ -1.59
BRCA1-224ENST00000497488 ZNF691Q5VV52 312 aa5.09□□□□□ -1.59
BRCA1-224ENST00000497488 PRMT9Q6P2P2 845 aa5.09□□□□□ -1.59
BRCA1-224ENST00000497488 SPESP1Q6UW49 350 aa5.09□□□□□ -1.59
BRCA1-224ENST00000497488 APOOLQ6UXV4 268 aa5.09□□□□□ -1.59
BRCA1-224ENST00000497488 LRRC6Q86X45 466 aa5.09□□□□□ -1.59
BRCA1-224ENST00000497488 CMTM1Q8IZ96 169 aa5.09□□□□□ -1.59
BRCA1-224ENST00000497488 NANOGP1Q8N7R0 232 aa5.09□□□□□ -1.59
BRCA1-224ENST00000497488 CLEC18CQ8NCF0 446 aa5.09□□□□□ -1.59
BRCA1-224ENST00000497488 OR10G8Q8NGN5 311 aa5.09□□□□□ -1.59
BRCA1-224ENST00000497488 STMN2Q93045 179 aa5.09□□□□□ -1.59
BRCA1-224ENST00000497488 CTRCQ99895 268 aa5.09□□□□□ -1.59
BRCA1-224ENST00000497488 SPZ1Q9BXG8 430 aa5.09□□□□□ -1.59
BRCA1-224ENST00000497488 NUDT4Q9NZJ9 180 aa5.09□□□□□ -1.59
BRCA1-224ENST00000497488 ICAM5Q9UMF0 924 aa5.09□□□□□ -1.59
BRCA1-224ENST00000497488 FAF1Q9UNN5 650 aaPredicted RBP5.09□□□□□ -1.59
BRCA1-224ENST00000497488 COPS3Q9UNS2 423 aa5.09□□□□□ -1.59
BRCA1-224ENST00000497488 NTNG1Q9Y2I2 539 aa5.09□□□□□ -1.59
BRCA1-224ENST00000497488 MRPS18CQ9Y3D5 142 aaKnown RBP5.09□□□□□ -1.59
BRCA1-224ENST00000497488 CDH10Q9Y6N8 788 aa5.09□□□□□ -1.59
BRCA1-224ENST00000497488 DLG5Q8TDM6 1919 aa5.09□□□□□ -1.6
BRCA1-224ENST00000497488 CKAP5Q14008 2032 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 UBN2Q6ZU65 1347 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 ADGRA3Q8IWK6 1321 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 MAPK8IP3Q9UPT6 1336 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 A0A1W2PR80 420 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 OR5B21A6NL26 309 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 GFYI3L273 518 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 COCHO43405 550 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 SNAI2O43623 268 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 KLK1P06870 262 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 MGMTP16455 207 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 ZNF26P17031 533 aaPredicted RBP5.08□□□□□ -1.6
BRCA1-224ENST00000497488 CTRB1P17538 263 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 SDC1P18827 310 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 FASP25445 335 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 HTR2CP28335 458 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 FOXN2P32314 431 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 YAP1P46937 504 aaKnown RBP5.08□□□□□ -1.6
BRCA1-224ENST00000497488 EMP2P54851 167 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 RND3P61587 244 aa5.08□□□□□ -1.6
BRCA1-224ENST00000497488 ORC2Q13416 577 aaPredicted RBP5.08□□□□□ -1.6
BRCA1-224ENST00000497488 OR5I1Q13606 314 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms