RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 DAG1Q14118 895 aa11.21□□□□□ -0.61
FN1-226ENST00000496542 IQCCQ4KMZ1 466 aa11.21□□□□□ -0.61
FN1-226ENST00000496542 KRT80Q6KB66 452 aa11.21□□□□□ -0.61
FN1-226ENST00000496542 RETREG3Q86VR2 466 aa11.21□□□□□ -0.61
FN1-226ENST00000496542 WDFY1Q8IWB7 410 aa11.21□□□□□ -0.61
FN1-226ENST00000496542 CCDC36Q8IYA8 594 aa11.21□□□□□ -0.61
FN1-226ENST00000496542 DPP10Q8N608 796 aa11.21□□□□□ -0.61
FN1-226ENST00000496542 GPR32P1Q8NGA4 272 aa11.21□□□□□ -0.61
FN1-226ENST00000496542 VANGL1Q8TAA9 524 aaPredicted RBP11.21□□□□□ -0.61
FN1-226ENST00000496542 CKAP2Q8WWK9 683 aa11.21□□□□□ -0.61
FN1-226ENST00000496542 ANKRD27Q96NW4 1050 aa11.21□□□□□ -0.61
FN1-226ENST00000496542 SHARPINQ9H0F6 387 aa11.21□□□□□ -0.61
FN1-226ENST00000496542 CHODLQ9H9P2 273 aa11.21□□□□□ -0.61
FN1-226ENST00000496542 NOX3Q9HBY0 568 aa11.21□□□□□ -0.61
FN1-226ENST00000496542 NPHS2Q9NP85 383 aa11.21□□□□□ -0.61
FN1-226ENST00000496542 DYNLRB1Q9NP97 96 aa11.21□□□□□ -0.61
FN1-226ENST00000496542 LOC100289279A0A1B0GTE1 492 aa11.2□□□□□ -0.62
FN1-226ENST00000496542 SH3PXD2BA1X283 911 aa11.2□□□□□ -0.62
FN1-226ENST00000496542 HMGB1P1B2RPK0 211 aaPredicted RBP11.2□□□□□ -0.62
FN1-226ENST00000496542 M0QX08 132 aa11.2□□□□□ -0.62
FN1-226ENST00000496542 CHP2O43745 196 aa11.2□□□□□ -0.62
FN1-226ENST00000496542 LMX1BO60663 402 aa11.2□□□□□ -0.62
FN1-226ENST00000496542 FMO6PO60774 539 aa11.2□□□□□ -0.62
FN1-226ENST00000496542 OR6A2O95222 327 aa11.2□□□□□ -0.62
FN1-226ENST00000496542 MT-ATP6P00846 226 aa11.2□□□□□ -0.62
FN1-226ENST00000496542 ERCC1P07992 297 aaPredicted RBP11.2□□□□□ -0.62
FN1-226ENST00000496542 ADORA3P0DMS8 318 aa11.2□□□□□ -0.62
FN1-226ENST00000496542 CSNK1A1P48729 337 aa11.2□□□□□ -0.62
FN1-226ENST00000496542 BIDP55957 195 aa11.2□□□□□ -0.62
FN1-226ENST00000496542 PIGFQ07326 219 aa11.2□□□□□ -0.62
FN1-226ENST00000496542 NPTX1Q15818 432 aa11.2□□□□□ -0.62
FN1-226ENST00000496542 DUSP7Q16829 419 aa11.2□□□□□ -0.62
FN1-226ENST00000496542 GSG1Q2KHT4 349 aa11.2□□□□□ -0.62
FN1-226ENST00000496542 ENTPD8Q5MY95 495 aa11.2□□□□□ -0.62
FN1-226ENST00000496542 FAM166AQ6J272 317 aa11.2□□□□□ -0.62
FN1-226ENST00000496542 ZNF613Q6PF04 617 aa11.2□□□□□ -0.62
FN1-226ENST00000496542 WDR88Q6ZMY6 472 aa11.2□□□□□ -0.62
FN1-226ENST00000496542 PXKQ7Z7A4 578 aa11.2□□□□□ -0.62
FN1-226ENST00000496542 SNX32Q86XE0 403 aa11.2□□□□□ -0.62
FN1-226ENST00000496542 RBM45Q8IUH3 476 aaKnown RBP11.2□□□□□ -0.62
FN1-226ENST00000496542 CDK20Q8IZL9 346 aa11.2□□□□□ -0.62
FN1-226ENST00000496542 ZCCHC24Q8N2G6 241 aaKnown RBP11.2□□□□□ -0.62
FN1-226ENST00000496542 ARIH2OSQ8N7S6 290 aa11.2□□□□□ -0.62
FN1-226ENST00000496542 OR6T1Q8NGN1 323 aa11.2□□□□□ -0.62
FN1-226ENST00000496542 OR5J2Q8NH18 312 aa11.2□□□□□ -0.62
FN1-226ENST00000496542 STON2Q8WXE9 905 aa11.2□□□□□ -0.62
FN1-226ENST00000496542 MS4A3Q96HJ5 214 aa11.2□□□□□ -0.62
FN1-226ENST00000496542 LRR1Q96L50 414 aa11.2□□□□□ -0.62
FN1-226ENST00000496542 MAGEB18Q96M61 343 aa11.2□□□□□ -0.62
FN1-226ENST00000496542 BPESC1Q9GZL8 116 aa11.2□□□□□ -0.62
FN1-226ENST00000496542 ZNF385DQ9H6B1 395 aa11.2□□□□□ -0.62
FN1-226ENST00000496542 TMEM160Q9NX00 188 aa11.2□□□□□ -0.62
FN1-226ENST00000496542 LPAR3Q9UBY5 353 aa11.2□□□□□ -0.62
FN1-226ENST00000496542 FBXO9Q9UK97 447 aaPredicted RBP11.2□□□□□ -0.62
FN1-226ENST00000496542 KCNS2Q9ULS6 477 aa11.2□□□□□ -0.62
FN1-226ENST00000496542 TRIM33Q9UPN9 1127 aa11.2□□□□□ -0.62
FN1-226ENST00000496542 SVEP1Q4LDE5 3571 aa11.2□□□□□ -0.62
FN1-226ENST00000496542 A0A0G2JND7 137 aa11.19□□□□□ -0.62
FN1-226ENST00000496542 KPNA4O00629 521 aaPredicted RBP11.19□□□□□ -0.62
FN1-226ENST00000496542 PHF1O43189 567 aaPredicted RBP11.19□□□□□ -0.62
FN1-226ENST00000496542 CH25HO95992 272 aa11.19□□□□□ -0.62
FN1-226ENST00000496542 C8BP07358 591 aa11.19□□□□□ -0.62
FN1-226ENST00000496542 DAOP14920 347 aa11.19□□□□□ -0.62
FN1-226ENST00000496542 IFNGR1P15260 489 aa11.19□□□□□ -0.62
FN1-226ENST00000496542 IGFBP5P24593 272 aa11.19□□□□□ -0.62
FN1-226ENST00000496542 PCGF2P35227 344 aa11.19□□□□□ -0.62
FN1-226ENST00000496542 PTDSS1P48651 473 aaKnown RBP11.19□□□□□ -0.62
FN1-226ENST00000496542 NHLRC1Q6VVB1 395 aa11.19□□□□□ -0.62
FN1-226ENST00000496542 IL17RELQ6ZVW7 336 aa11.19□□□□□ -0.62
FN1-226ENST00000496542 PATL1Q86TB9 770 aaKnown RBP11.19□□□□□ -0.62
FN1-226ENST00000496542 SLC30A8Q8IWU4 369 aa11.19□□□□□ -0.62
FN1-226ENST00000496542 IL17RDQ8NFM7 739 aa11.19□□□□□ -0.62
FN1-226ENST00000496542 OR4D11Q8NGI4 311 aa11.19□□□□□ -0.62
FN1-226ENST00000496542 OR10A6Q8NH74 314 aa11.19□□□□□ -0.62
FN1-226ENST00000496542 MSI2Q96DH6 328 aaKnown RBP11.19□□□□□ -0.62
FN1-226ENST00000496542 DOK1Q99704 481 aa11.19□□□□□ -0.62
FN1-226ENST00000496542 FOXB1Q99853 325 aa11.19□□□□□ -0.62
FN1-226ENST00000496542 B3GNT2Q9NY97 397 aa11.19□□□□□ -0.62
FN1-226ENST00000496542 SLC7A7Q9UM01 511 aa11.19□□□□□ -0.62
FN1-226ENST00000496542 CMAHPQ9Y471 501 aa11.19□□□□□ -0.62
FN1-226ENST00000496542 TMEM129A0AVI4 362 aa11.18□□□□□ -0.62
FN1-226ENST00000496542 TRAPPC13A5PLN9 417 aa11.18□□□□□ -0.62
FN1-226ENST00000496542 RNF13O43567 381 aa11.18□□□□□ -0.62
FN1-226ENST00000496542 EDF1O60869 148 aaKnown RBP11.18□□□□□ -0.62
FN1-226ENST00000496542 LYPD3O95274 346 aa11.18□□□□□ -0.62
FN1-226ENST00000496542 STAMBPO95630 424 aa11.18□□□□□ -0.62
FN1-226ENST00000496542 RAB36O95755 333 aa11.18□□□□□ -0.62
FN1-226ENST00000496542 THY1P04216 161 aa11.18□□□□□ -0.62
FN1-226ENST00000496542 ADRA2AP08913 450 aa11.18□□□□□ -0.62
FN1-226ENST00000496542 ZNF23P17027 643 aa11.18□□□□□ -0.62
FN1-226ENST00000496542 CD247P20963 164 aa11.18□□□□□ -0.62
FN1-226ENST00000496542 NR4A1P22736 598 aa11.18□□□□□ -0.62
FN1-226ENST00000496542 GIPRP48546 466 aa11.18□□□□□ -0.62
FN1-226ENST00000496542 ZNF74Q16587 644 aa11.18□□□□□ -0.62
FN1-226ENST00000496542 TRMT5Q32P41 509 aaKnown RBP11.18□□□□□ -0.62
FN1-226ENST00000496542 TTC33Q6PID6 262 aaPredicted RBP11.18□□□□□ -0.62
FN1-226ENST00000496542 LINC00114Q6XXX2 140 aa11.18□□□□□ -0.62
FN1-226ENST00000496542 SLC35D2Q76EJ3 337 aa11.18□□□□□ -0.62
FN1-226ENST00000496542 HDXQ7Z353 690 aa11.18□□□□□ -0.62
FN1-226ENST00000496542 TSPYL5Q86VY4 417 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms