RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 NEU4Q8WWR8 484 aaPredicted RBP11.62□□□□□ -0.55
CTDSP1-212ENST00000494067 RASSF5Q8WWW0 418 aa11.62□□□□□ -0.55
CTDSP1-212ENST00000494067 STON2Q8WXE9 905 aa11.62□□□□□ -0.55
CTDSP1-212ENST00000494067 TXNDC15Q96J42 360 aa11.62□□□□□ -0.55
CTDSP1-212ENST00000494067 SORCS2Q96PQ0 1159 aa11.62□□□□□ -0.55
CTDSP1-212ENST00000494067 CGREF1Q99674 301 aa11.62□□□□□ -0.55
CTDSP1-212ENST00000494067 ARHGDIGQ99819 225 aa11.62□□□□□ -0.55
CTDSP1-212ENST00000494067 SIKE1Q9BRV8 207 aa11.62□□□□□ -0.55
CTDSP1-212ENST00000494067 EMC6Q9BV81 110 aa11.62□□□□□ -0.55
CTDSP1-212ENST00000494067 ULBP2Q9BZM5 246 aa11.62□□□□□ -0.55
CTDSP1-212ENST00000494067 SHARPINQ9H0F6 387 aa11.62□□□□□ -0.55
CTDSP1-212ENST00000494067 PLK3Q9H4B4 646 aa11.62□□□□□ -0.55
CTDSP1-212ENST00000494067 DYNLRB1Q9NP97 96 aa11.62□□□□□ -0.55
CTDSP1-212ENST00000494067 ARGLU1Q9NWB6 273 aaPredicted RBP11.62□□□□□ -0.55
CTDSP1-212ENST00000494067 TMEM160Q9NX00 188 aa11.62□□□□□ -0.55
CTDSP1-212ENST00000494067 MRPL39Q9NYK5 338 aaKnown RBP11.62□□□□□ -0.55
CTDSP1-212ENST00000494067 KCNS2Q9ULS6 477 aa11.62□□□□□ -0.55
CTDSP1-212ENST00000494067 HIVEP2P31629 2446 aa11.61□□□□□ -0.55
CTDSP1-212ENST00000494067 ALPK2Q86TB3 2170 aa11.61□□□□□ -0.55
CTDSP1-212ENST00000494067 SLC35F4A4IF30 521 aa11.61□□□□□ -0.55
CTDSP1-212ENST00000494067 RNF212BA8MTL3 300 aa11.61□□□□□ -0.55
CTDSP1-212ENST00000494067 hCG_2039718K7EN88 272 aa11.61□□□□□ -0.55
CTDSP1-212ENST00000494067 LMX1BO60663 402 aa11.61□□□□□ -0.55
CTDSP1-212ENST00000494067 FMO6PO60774 539 aa11.61□□□□□ -0.55
CTDSP1-212ENST00000494067 SERPINI2O75830 405 aa11.61□□□□□ -0.55
CTDSP1-212ENST00000494067 HIST1H2ABP04908 130 aa11.61□□□□□ -0.55
CTDSP1-212ENST00000494067 IGFBP1P08833 259 aaPredicted RBP11.61□□□□□ -0.55
CTDSP1-212ENST00000494067 FAM157CP0CG43 387 aa11.61□□□□□ -0.55
CTDSP1-212ENST00000494067 APEHP13798 732 aaKnown RBP11.61□□□□□ -0.55
CTDSP1-212ENST00000494067 LSP1P33241 339 aa11.61□□□□□ -0.55
CTDSP1-212ENST00000494067 NR4A2P43354 598 aa11.61□□□□□ -0.55
CTDSP1-212ENST00000494067 HGFACQ04756 655 aa11.61□□□□□ -0.55
CTDSP1-212ENST00000494067 SF3A3Q12874 501 aaKnown RBP eCLIP11.61□□□□□ -0.551e-6■■■■□ 19.3
CTDSP1-212ENST00000494067 DAG1Q14118 895 aa11.61□□□□□ -0.55
CTDSP1-212ENST00000494067 TRMT5Q32P41 509 aaKnown RBP11.61□□□□□ -0.55
CTDSP1-212ENST00000494067 LINC00114Q6XXX2 140 aa11.61□□□□□ -0.55
CTDSP1-212ENST00000494067 ZNF813Q6ZN06 617 aa11.61□□□□□ -0.55
CTDSP1-212ENST00000494067 HIST3H2AQ7L7L0 130 aa11.61□□□□□ -0.55
CTDSP1-212ENST00000494067 SPATA21Q7Z572 469 aa11.61□□□□□ -0.55
CTDSP1-212ENST00000494067 PXKQ7Z7A4 578 aa11.61□□□□□ -0.55
CTDSP1-212ENST00000494067 PATL1Q86TB9 770 aaKnown RBP11.61□□□□□ -0.55
CTDSP1-212ENST00000494067 OR6T1Q8NGN1 323 aa11.61□□□□□ -0.55
CTDSP1-212ENST00000494067 OR5J2Q8NH18 312 aa11.61□□□□□ -0.55
CTDSP1-212ENST00000494067 TSPEARQ8WU66 669 aa11.61□□□□□ -0.55
CTDSP1-212ENST00000494067 TMEM158Q8WZ71 300 aa11.61□□□□□ -0.55
CTDSP1-212ENST00000494067 HIST1H2ACQ93077 130 aa11.61□□□□□ -0.55
CTDSP1-212ENST00000494067 TAMM41Q96BW9 452 aa11.61□□□□□ -0.55
CTDSP1-212ENST00000494067 DENND2DQ9H6A0 471 aaPredicted RBP11.61□□□□□ -0.55
CTDSP1-212ENST00000494067 KAT8Q9H7Z6 458 aaKnown RBP11.61□□□□□ -0.55
CTDSP1-212ENST00000494067 MRGBPQ9NV56 204 aa11.61□□□□□ -0.55
CTDSP1-212ENST00000494067 MED29Q9NX70 200 aa11.61□□□□□ -0.55
CTDSP1-212ENST00000494067 FBXL3Q9UKT7 428 aa11.61□□□□□ -0.55
CTDSP1-212ENST00000494067 M0QX08 132 aa11.6□□□□□ -0.55
CTDSP1-212ENST00000494067 FXYD1O00168 92 aa11.6□□□□□ -0.55
CTDSP1-212ENST00000494067 CHP2O43745 196 aa11.6□□□□□ -0.55
CTDSP1-212ENST00000494067 RAB36O95755 333 aa11.6□□□□□ -0.55
CTDSP1-212ENST00000494067 ADORA3P0DMS8 318 aa11.6□□□□□ -0.55
CTDSP1-212ENST00000494067 IGHV4-31P0DP07 118 aa11.6□□□□□ -0.55
CTDSP1-212ENST00000494067 HNF1AP20823 631 aa11.6□□□□□ -0.55
CTDSP1-212ENST00000494067 THBS4P35443 961 aa11.6□□□□□ -0.55
CTDSP1-212ENST00000494067 GALK2Q01415 458 aa11.6□□□□□ -0.55
CTDSP1-212ENST00000494067 CAMK2DQ13557 499 aa11.6□□□□□ -0.55
CTDSP1-212ENST00000494067 MSMPQ1L6U9 139 aa11.6□□□□□ -0.55
CTDSP1-212ENST00000494067 METTL21CQ5VZV1 264 aa11.6□□□□□ -0.55
CTDSP1-212ENST00000494067 FAM166AQ6J272 317 aa11.6□□□□□ -0.55
CTDSP1-212ENST00000494067 MDP1Q86V88 176 aa11.6□□□□□ -0.55
CTDSP1-212ENST00000494067 ANKS4BQ8N8V4 417 aa11.6□□□□□ -0.55
CTDSP1-212ENST00000494067 ZNF75AQ96N20 296 aa11.6□□□□□ -0.55
CTDSP1-212ENST00000494067 FOXN4Q96NZ1 517 aa11.6□□□□□ -0.55
CTDSP1-212ENST00000494067 SH3GL1Q99961 368 aa11.6□□□□□ -0.55
CTDSP1-212ENST00000494067 VIPAS39Q9H9C1 493 aa11.6□□□□□ -0.55
CTDSP1-212ENST00000494067 ZNF224Q9NZL3 707 aa11.6□□□□□ -0.55
CTDSP1-212ENST00000494067 CMAHPQ9Y471 501 aa11.6□□□□□ -0.55
CTDSP1-212ENST00000494067 SONP18583 2426 aaKnown RBP11.59□□□□□ -0.55
CTDSP1-212ENST00000494067 FBN3Q75N90 2809 aa11.59□□□□□ -0.55
CTDSP1-212ENST00000494067 IGHV2OR16-5A0A0B4J2B6 119 aa11.59□□□□□ -0.55
CTDSP1-212ENST00000494067 A0A0G2JND7 137 aa11.59□□□□□ -0.55
CTDSP1-212ENST00000494067 LOC100289279A0A1B0GTE1 492 aa11.59□□□□□ -0.55
CTDSP1-212ENST00000494067 SH3PXD2BA1X283 911 aa11.59□□□□□ -0.55
CTDSP1-212ENST00000494067 CPSF4LA6NMK7 179 aaKnown RBP11.59□□□□□ -0.55
CTDSP1-212ENST00000494067 C11orf98E9PRG8 122 aa11.59□□□□□ -0.55
CTDSP1-212ENST00000494067 PLPP3O14495 311 aa11.59□□□□□ -0.55
CTDSP1-212ENST00000494067 UBL3O95164 117 aa11.59□□□□□ -0.55
CTDSP1-212ENST00000494067 UMPSP11172 480 aa11.59□□□□□ -0.55
CTDSP1-212ENST00000494067 ZNF16P17020 682 aaPredicted RBP11.59□□□□□ -0.55
CTDSP1-212ENST00000494067 TNFRSF1BP20333 461 aa11.59□□□□□ -0.55
CTDSP1-212ENST00000494067 CSNK1A1P48729 337 aa11.59□□□□□ -0.55
CTDSP1-212ENST00000494067 SNTB2Q13425 540 aaKnown RBP11.59□□□□□ -0.55
CTDSP1-212ENST00000494067 CYLC2Q14093 348 aaPredicted RBP11.59□□□□□ -0.55
CTDSP1-212ENST00000494067 RABL3Q5HYI8 236 aa11.59□□□□□ -0.55
CTDSP1-212ENST00000494067 ENTPD8Q5MY95 495 aa11.59□□□□□ -0.55
CTDSP1-212ENST00000494067 GKAP1Q5VSY0 366 aaPredicted RBP11.59□□□□□ -0.55
CTDSP1-212ENST00000494067 KRT80Q6KB66 452 aa11.59□□□□□ -0.55
CTDSP1-212ENST00000494067 SVOPLQ8N434 492 aa11.59□□□□□ -0.55
CTDSP1-212ENST00000494067 LRRC17Q8N6Y2 441 aa11.59□□□□□ -0.55
CTDSP1-212ENST00000494067 OR10A6Q8NH74 314 aa11.59□□□□□ -0.55
CTDSP1-212ENST00000494067 VANGL1Q8TAA9 524 aaPredicted RBP11.59□□□□□ -0.55
CTDSP1-212ENST00000494067 MPP4Q96JB8 637 aa11.59□□□□□ -0.55
CTDSP1-212ENST00000494067 FOXB1Q99853 325 aa11.59□□□□□ -0.55
CTDSP1-212ENST00000494067 TMEM120AQ9BXJ8 343 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms