RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 GIFP27352 417 aa10.79□□□□□ -0.68
COL6A1-205ENST00000492851 RPS23P62266 143 aaKnown RBP10.79□□□□□ -0.68
COL6A1-205ENST00000492851 ZP4Q12836 540 aa10.79□□□□□ -0.68
COL6A1-205ENST00000492851 NPRL3Q12980 569 aa10.79□□□□□ -0.68
COL6A1-205ENST00000492851 CYLC2Q14093 348 aaPredicted RBP10.79□□□□□ -0.68
COL6A1-205ENST00000492851 CARTPTQ16568 116 aa10.79□□□□□ -0.68
COL6A1-205ENST00000492851 DUSP7Q16829 419 aa10.79□□□□□ -0.68
COL6A1-205ENST00000492851 CARD17Q5XLA6 110 aa10.79□□□□□ -0.68
COL6A1-205ENST00000492851 REP15Q6BDI9 236 aa10.79□□□□□ -0.68
COL6A1-205ENST00000492851 ZNF813Q6ZN06 617 aa10.79□□□□□ -0.68
COL6A1-205ENST00000492851 SPATA21Q7Z572 469 aa10.79□□□□□ -0.68
COL6A1-205ENST00000492851 DPPA2Q7Z7J5 298 aa10.79□□□□□ -0.68
COL6A1-205ENST00000492851 MDP1Q86V88 176 aa10.79□□□□□ -0.68
COL6A1-205ENST00000492851 C10orf111Q8N326 155 aa10.79□□□□□ -0.68
COL6A1-205ENST00000492851 SMYD1Q8NB12 490 aa10.79□□□□□ -0.68
COL6A1-205ENST00000492851 OR6X1Q8NH79 312 aa10.79□□□□□ -0.68
COL6A1-205ENST00000492851 CKAP2Q8WWK9 683 aa10.79□□□□□ -0.68
COL6A1-205ENST00000492851 HPS1Q92902 700 aa10.79□□□□□ -0.68
COL6A1-205ENST00000492851 CGREF1Q99674 301 aa10.79□□□□□ -0.68
COL6A1-205ENST00000492851 EMC6Q9BV81 110 aa10.79□□□□□ -0.68
COL6A1-205ENST00000492851 RSPO3Q9BXY4 272 aaPredicted RBP10.79□□□□□ -0.68
COL6A1-205ENST00000492851 ULBP2Q9BZM5 246 aa10.79□□□□□ -0.68
COL6A1-205ENST00000492851 IKZF5Q9H5V7 419 aa10.79□□□□□ -0.68
COL6A1-205ENST00000492851 VIPAS39Q9H9C1 493 aa10.79□□□□□ -0.68
COL6A1-205ENST00000492851 DYNLRB1Q9NP97 96 aa10.79□□□□□ -0.68
COL6A1-205ENST00000492851 NANSQ9NR45 359 aa10.79□□□□□ -0.68
COL6A1-205ENST00000492851 B3GNT2Q9NY97 397 aa10.79□□□□□ -0.68
COL6A1-205ENST00000492851 TRAPPC13A5PLN9 417 aa10.78□□□□□ -0.68
COL6A1-205ENST00000492851 TPST2O60704 377 aa10.78□□□□□ -0.68
COL6A1-205ENST00000492851 STAMBPO95630 424 aa10.78□□□□□ -0.68
COL6A1-205ENST00000492851 RAB36O95755 333 aa10.78□□□□□ -0.68
COL6A1-205ENST00000492851 HPRP00739 348 aa10.78□□□□□ -0.68
COL6A1-205ENST00000492851 NPPAP01160 153 aa10.78□□□□□ -0.68
COL6A1-205ENST00000492851 HLA-DOBP13765 273 aa10.78□□□□□ -0.68
COL6A1-205ENST00000492851 DAOP14920 347 aa10.78□□□□□ -0.68
COL6A1-205ENST00000492851 GLRXP35754 106 aa10.78□□□□□ -0.68
COL6A1-205ENST00000492851 CSNK1A1P48729 337 aa10.78□□□□□ -0.68
COL6A1-205ENST00000492851 CHN2P52757 468 aa10.78□□□□□ -0.68
COL6A1-205ENST00000492851 RAB1AP62820 205 aa10.78□□□□□ -0.68
COL6A1-205ENST00000492851 GALK2Q01415 458 aa10.78□□□□□ -0.68
COL6A1-205ENST00000492851 SNTB2Q13425 540 aaKnown RBP10.78□□□□□ -0.68
COL6A1-205ENST00000492851 CAMK2DQ13557 499 aa10.78□□□□□ -0.68
COL6A1-205ENST00000492851 NFYCQ13952 458 aa10.78□□□□□ -0.68
COL6A1-205ENST00000492851 ENTPD8Q5MY95 495 aa10.78□□□□□ -0.68
COL6A1-205ENST00000492851 NHLRC1Q6VVB1 395 aa10.78□□□□□ -0.68
COL6A1-205ENST00000492851 COMTD1Q86VU5 262 aa10.78□□□□□ -0.68
COL6A1-205ENST00000492851 PTOV1Q86YD1 416 aa10.78□□□□□ -0.68
COL6A1-205ENST00000492851 ZNF786Q8N393 782 aa10.78□□□□□ -0.68
COL6A1-205ENST00000492851 ANKS4BQ8N8V4 417 aa10.78□□□□□ -0.68
COL6A1-205ENST00000492851 ZNF837Q96EG3 531 aaPredicted RBP10.78□□□□□ -0.68
COL6A1-205ENST00000492851 TXNDC15Q96J42 360 aa10.78□□□□□ -0.68
COL6A1-205ENST00000492851 MOGAT1Q96PD6 335 aa10.78□□□□□ -0.68
COL6A1-205ENST00000492851 FOXB1Q99853 325 aa10.78□□□□□ -0.68
COL6A1-205ENST00000492851 KAT8Q9H7Z6 458 aaKnown RBP10.78□□□□□ -0.68
COL6A1-205ENST00000492851 NOX3Q9HBY0 568 aa10.78□□□□□ -0.68
COL6A1-205ENST00000492851 ARGLU1Q9NWB6 273 aaPredicted RBP10.78□□□□□ -0.68
COL6A1-205ENST00000492851 ZNF229Q9UJW7 825 aa10.78□□□□□ -0.68
COL6A1-205ENST00000492851 CHD3Q12873 2000 aaKnown RBP10.78□□□□□ -0.68
COL6A1-205ENST00000492851 SLC22A23A1A5C7 686 aa10.77□□□□□ -0.69
COL6A1-205ENST00000492851 RNF13O43567 381 aa10.77□□□□□ -0.69
COL6A1-205ENST00000492851 SYNGR3O43761 229 aa10.77□□□□□ -0.69
COL6A1-205ENST00000492851 FARS2O95363 451 aaKnown RBP10.77□□□□□ -0.69
COL6A1-205ENST00000492851 PTHP01270 115 aa10.77□□□□□ -0.69
COL6A1-205ENST00000492851 IFNA14P01570 189 aa10.77□□□□□ -0.69
COL6A1-205ENST00000492851 HLA-HP01893 362 aa10.77□□□□□ -0.69
COL6A1-205ENST00000492851 CELA3BP08861 270 aa10.77□□□□□ -0.69
COL6A1-205ENST00000492851 ZNF35P13682 527 aa10.77□□□□□ -0.69
COL6A1-205ENST00000492851 SRD5A1P18405 259 aa10.77□□□□□ -0.69
COL6A1-205ENST00000492851 CD247P20963 164 aa10.77□□□□□ -0.69
COL6A1-205ENST00000492851 PIGFQ07326 219 aa10.77□□□□□ -0.69
COL6A1-205ENST00000492851 NPTX1Q15818 432 aa10.77□□□□□ -0.69
COL6A1-205ENST00000492851 NRN1LQ496H8 165 aa10.77□□□□□ -0.69
COL6A1-205ENST00000492851 TTMPQ5BVD1 217 aa10.77□□□□□ -0.69
COL6A1-205ENST00000492851 PHYHD1Q5SRE7 291 aa10.77□□□□□ -0.69
COL6A1-205ENST00000492851 GKAP1Q5VSY0 366 aaPredicted RBP10.77□□□□□ -0.69
COL6A1-205ENST00000492851 HDDC2Q7Z4H3 204 aa10.77□□□□□ -0.69
COL6A1-205ENST00000492851 SVOPLQ8N434 492 aa10.77□□□□□ -0.69
COL6A1-205ENST00000492851 OR6T1Q8NGN1 323 aa10.77□□□□□ -0.69
COL6A1-205ENST00000492851 ADAMTS16Q8TE57 1224 aa10.77□□□□□ -0.69
COL6A1-205ENST00000492851 UBASH3BQ8TF42 649 aa10.77□□□□□ -0.69
COL6A1-205ENST00000492851 ZNF566Q969W8 418 aa10.77□□□□□ -0.69
COL6A1-205ENST00000492851 MRPL24Q96A35 216 aaKnown RBP10.77□□□□□ -0.69
COL6A1-205ENST00000492851 MSI2Q96DH6 328 aaKnown RBP10.77□□□□□ -0.69
COL6A1-205ENST00000492851 SLC25A44Q96H78 314 aaPredicted RBP10.77□□□□□ -0.69
COL6A1-205ENST00000492851 POLR2J2Q9GZM3 115 aaKnown RBP10.77□□□□□ -0.69
COL6A1-205ENST00000492851 PCDHAC1Q9H158 963 aa10.77□□□□□ -0.69
COL6A1-205ENST00000492851 POLR2J3Q9H1A7 115 aaKnown RBP10.77□□□□□ -0.69
COL6A1-205ENST00000492851 MED29Q9NX70 200 aa10.77□□□□□ -0.69
COL6A1-205ENST00000492851 GPR160Q9UJ42 338 aa10.77□□□□□ -0.69
COL6A1-205ENST00000492851 TMEM129A0AVI4 362 aa10.76□□□□□ -0.69
COL6A1-205ENST00000492851 CPSF4LA6NMK7 179 aaKnown RBP10.76□□□□□ -0.69
COL6A1-205ENST00000492851 CENPBD1B2RD01 187 aa10.76□□□□□ -0.69
COL6A1-205ENST00000492851 M0R3H8 397 aa10.76□□□□□ -0.69
COL6A1-205ENST00000492851 CH25HO95992 272 aa10.76□□□□□ -0.69
COL6A1-205ENST00000492851 TGFAP01135 160 aa10.76□□□□□ -0.69
COL6A1-205ENST00000492851 TACSTD2P09758 323 aa10.76□□□□□ -0.69
COL6A1-205ENST00000492851 OR8G3PP0DMU2 310 aa10.76□□□□□ -0.69
COL6A1-205ENST00000492851 IFNGR1P15260 489 aa10.76□□□□□ -0.69
COL6A1-205ENST00000492851 ZNF14P17017 642 aaPredicted RBP10.76□□□□□ -0.69
COL6A1-205ENST00000492851 ZNF16P17020 682 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms