RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 M0R3G1 203 aa9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 ABCD4O14678 606 aa9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 HS3ST1O14792 307 aa9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 CLOCKO15516 846 aa9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 PIP5K1CO60331 668 aa9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 BCL10O95999 233 aa9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 PLAUP00749 431 aa9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 SEMG1P04279 462 aa9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 H1F0P07305 194 aaKnown RBP9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 T-ENOLP0DO92 83 aa9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 SAGP10523 405 aaPredicted RBP9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 CDH2P19022 906 aaPredicted RBP9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 CSNK1A1P48729 337 aa9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 SLC9A3P48764 834 aa9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 DAP3P51398 398 aaKnown RBP9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 ZNF83P51522 516 aa9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 BIDP55957 195 aa9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 VLDLRP98155 873 aa9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 CAMK2DQ13557 499 aa9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 DGCR6Q14129 220 aa9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 TBRG1Q3YBR2 411 aa9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 ZNF672Q499Z4 452 aaPredicted RBP9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 CARD17Q5XLA6 110 aa9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 SPNS3Q6ZMD2 512 aa9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 MBOAT2Q6ZWT7 520 aa9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 NRMQ8IXM6 262 aa9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 CCDC36Q8IYA8 594 aa9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 CDK20Q8IZL9 346 aa9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 FAM86B1Q8N7N1 296 aa9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 ZNF611Q8N823 705 aa9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 OR6N1Q8NGY5 312 aa9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 AKAP1Q92667 903 aaKnown RBP eCLIP9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 BCL2L2Q92843 193 aaPredicted RBP9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 POP5Q969H6 163 aaKnown RBP9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 FBXW5Q969U6 566 aa9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 ZNF566Q969W8 418 aa9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 SLC25A44Q96H78 314 aaPredicted RBP9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 TXNDC15Q96J42 360 aa9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 C7orf34Q96L11 122 aa9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 CCL19Q99731 98 aa9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 ULBP2Q9BZM5 246 aa9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 NELFAQ9H3P2 528 aa9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 KRCC1Q9NPI7 259 aaPredicted RBP9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 INIPQ9NRY2 104 aa9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 NDUFAF4Q9P032 175 aa9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 ACTR3BQ9P1U1 418 aa9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 TMEM5Q9Y2B1 443 aa9.33□□□□□ -0.92
CDC42SE1-206ENST00000492796 AKAP9Q99996 3911 aa9.32□□□□□ -0.92
CDC42SE1-206ENST00000492796 EFCAB9A8MZ26 197 aa9.32□□□□□ -0.92
CDC42SE1-206ENST00000492796 MCIDASD6RGH6 385 aa9.32□□□□□ -0.92
CDC42SE1-206ENST00000492796 hCG_2039718K7EN88 272 aa9.32□□□□□ -0.92
CDC42SE1-206ENST00000492796 M0R1B8 84 aa9.32□□□□□ -0.92
CDC42SE1-206ENST00000492796 IGHG1P01857 330 aa9.32□□□□□ -0.92
CDC42SE1-206ENST00000492796 FABP3P05413 133 aa9.32□□□□□ -0.92
CDC42SE1-206ENST00000492796 PGA4P0DJD7 388 aa9.32□□□□□ -0.92
CDC42SE1-206ENST00000492796 PGA3P0DJD8 388 aa9.32□□□□□ -0.92
CDC42SE1-206ENST00000492796 NR2C1P13056 603 aa9.32□□□□□ -0.92
CDC42SE1-206ENST00000492796 CD40P25942 277 aa9.32□□□□□ -0.92
CDC42SE1-206ENST00000492796 MSX2P35548 267 aaPredicted RBP9.32□□□□□ -0.92
CDC42SE1-206ENST00000492796 AQP2P41181 271 aa9.32□□□□□ -0.92
CDC42SE1-206ENST00000492796 SMIM11AP58511 58 aa9.32□□□□□ -0.92
CDC42SE1-206ENST00000492796 RPS4XP62701 263 aaKnown RBP9.32□□□□□ -0.92
CDC42SE1-206ENST00000492796 ARF1P84077 181 aaKnown RBP9.32□□□□□ -0.92
CDC42SE1-206ENST00000492796 FOXD4Q12950 439 aaPredicted RBP9.32□□□□□ -0.92
CDC42SE1-206ENST00000492796 MELKQ14680 651 aa9.32□□□□□ -0.92
CDC42SE1-206ENST00000492796 TAF11Q15544 211 aa9.32□□□□□ -0.92
CDC42SE1-206ENST00000492796 C3orf36Q3SXR2 165 aa9.32□□□□□ -0.92
CDC42SE1-206ENST00000492796 ALG10Q5BKT4 473 aa9.32□□□□□ -0.92
CDC42SE1-206ENST00000492796 PHYHD1Q5SRE7 291 aa9.32□□□□□ -0.92
CDC42SE1-206ENST00000492796 LCN8Q6JVE9 175 aa9.32□□□□□ -0.92
CDC42SE1-206ENST00000492796 RINLQ6ZS11 566 aa9.32□□□□□ -0.92
CDC42SE1-206ENST00000492796 TMPRSS11FQ6ZWK6 438 aa9.32□□□□□ -0.92
CDC42SE1-206ENST00000492796 ZNF627Q7L945 461 aa9.32□□□□□ -0.92
CDC42SE1-206ENST00000492796 RRM2BQ7LG56 351 aa9.32□□□□□ -0.92
CDC42SE1-206ENST00000492796 FAM169BQ8N8A8 192 aa9.32□□□□□ -0.92
CDC42SE1-206ENST00000492796 KBTBD8Q8NFY9 601 aa9.32□□□□□ -0.92
CDC42SE1-206ENST00000492796 SLC7A13Q8TCU3 470 aa9.32□□□□□ -0.92
CDC42SE1-206ENST00000492796 TMEM54Q969K7 222 aa9.32□□□□□ -0.92
CDC42SE1-206ENST00000492796 DHRS1Q96LJ7 313 aa9.32□□□□□ -0.92
CDC42SE1-206ENST00000492796 NDEL1Q9GZM8 345 aa9.32□□□□□ -0.92
CDC42SE1-206ENST00000492796 GLTPQ9NZD2 209 aa9.32□□□□□ -0.92
CDC42SE1-206ENST00000492796 V9GYQ6 96 aa9.32□□□□□ -0.92
CDC42SE1-206ENST00000492796 OTOGQ6ZRI0 2925 aa9.32□□□□□ -0.92
CDC42SE1-206ENST00000492796 A0A096LPE4 126 aa9.31□□□□□ -0.92
CDC42SE1-206ENST00000492796 A0A1W2PPZ6 126 aa9.31□□□□□ -0.92
CDC42SE1-206ENST00000492796 SHISA9B4DS77 424 aa9.31□□□□□ -0.92
CDC42SE1-206ENST00000492796 HAX1O00165 279 aa9.31□□□□□ -0.92
CDC42SE1-206ENST00000492796 ENTPD5O75356 428 aa9.31□□□□□ -0.92
CDC42SE1-206ENST00000492796 IGHMP01871 453 aa9.31□□□□□ -0.92
CDC42SE1-206ENST00000492796 F13BP05160 661 aa9.31□□□□□ -0.92
CDC42SE1-206ENST00000492796 MAKP20794 623 aa9.31□□□□□ -0.92
CDC42SE1-206ENST00000492796 FUT4P22083 530 aa9.31□□□□□ -0.92
CDC42SE1-206ENST00000492796 CDH11P55287 796 aa9.31□□□□□ -0.92
CDC42SE1-206ENST00000492796 CLRN1P58418 232 aa9.31□□□□□ -0.92
CDC42SE1-206ENST00000492796 LSM11P83369 360 aaKnown RBP eCLIP9.31□□□□□ -0.92
CDC42SE1-206ENST00000492796 TRIM25Q14258 630 aaKnown RBP9.31□□□□□ -0.92
CDC42SE1-206ENST00000492796 IQCCQ4KMZ1 466 aa9.31□□□□□ -0.92
CDC42SE1-206ENST00000492796 FGD3Q5JSP0 725 aa9.31□□□□□ -0.92
CDC42SE1-206ENST00000492796 FAM205BPQ63HN1 556 aa9.31□□□□□ -0.92
CDC42SE1-206ENST00000492796 OAFQ86UD1 273 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms