RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 NHLRC1Q6VVB1 395 aa7.17□□□□□ -1.26
LSM2-213ENST00000491421 LINC00114Q6XXX2 140 aa7.17□□□□□ -1.26
LSM2-213ENST00000491421 WDR88Q6ZMY6 472 aa7.17□□□□□ -1.26
LSM2-213ENST00000491421 ZNF813Q6ZN06 617 aa7.17□□□□□ -1.26
LSM2-213ENST00000491421 MYPOPQ86VE0 399 aaPredicted RBP7.17□□□□□ -1.26
LSM2-213ENST00000491421 SNX32Q86XE0 403 aa7.17□□□□□ -1.26
LSM2-213ENST00000491421 RBM45Q8IUH3 476 aaKnown RBP7.17□□□□□ -1.26
LSM2-213ENST00000491421 ANKS4BQ8N8V4 417 aa7.17□□□□□ -1.26
LSM2-213ENST00000491421 NUP37Q8NFH4 326 aa7.17□□□□□ -1.26
LSM2-213ENST00000491421 OR4D11Q8NGI4 311 aa7.17□□□□□ -1.26
LSM2-213ENST00000491421 OR5J2Q8NH18 312 aa7.17□□□□□ -1.26
LSM2-213ENST00000491421 ADAMTS16Q8TE57 1224 aa7.17□□□□□ -1.26
LSM2-213ENST00000491421 RASSF5Q8WWW0 418 aa7.17□□□□□ -1.26
LSM2-213ENST00000491421 NANOS1Q8WY41 292 aaKnown RBP7.17□□□□□ -1.26
LSM2-213ENST00000491421 PROX1Q92786 737 aa7.17□□□□□ -1.26
LSM2-213ENST00000491421 MPP4Q96JB8 637 aa7.17□□□□□ -1.26
LSM2-213ENST00000491421 SORCS2Q96PQ0 1159 aa7.17□□□□□ -1.26
LSM2-213ENST00000491421 TNFRSF13CQ96RJ3 184 aa7.17□□□□□ -1.26
LSM2-213ENST00000491421 SH3GL1Q99961 368 aa7.17□□□□□ -1.26
LSM2-213ENST00000491421 VRK1Q99986 396 aaPredicted RBP7.17□□□□□ -1.26
LSM2-213ENST00000491421 PLK3Q9H4B4 646 aa7.17□□□□□ -1.26
LSM2-213ENST00000491421 ZNF442Q9H7R0 627 aa7.17□□□□□ -1.26
LSM2-213ENST00000491421 NANOGQ9H9S0 305 aa7.17□□□□□ -1.26
LSM2-213ENST00000491421 MRGBPQ9NV56 204 aa7.17□□□□□ -1.26
LSM2-213ENST00000491421 METRNQ9UJH8 293 aa7.17□□□□□ -1.26
LSM2-213ENST00000491421 ADAM21Q9UKJ8 722 aa7.17□□□□□ -1.26
LSM2-213ENST00000491421 USP22Q9UPT9 525 aa7.17□□□□□ -1.26
LSM2-213ENST00000491421 POFUT2Q9Y2G5 429 aa7.17□□□□□ -1.26
LSM2-213ENST00000491421 PLCE1Q9P212 2302 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 BBIP1A8MTZ0 92 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 A8MV72 311 aaPredicted RBP7.16□□□□□ -1.26
LSM2-213ENST00000491421 FXYD1O00168 92 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 MRASO14807 208 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 RNF13O43567 381 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 LYPD3O95274 346 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 HLA-HP01893 362 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 THY1P04216 161 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 HIST1H2ABP04908 130 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 ERCC1P07992 297 aaPredicted RBP7.16□□□□□ -1.26
LSM2-213ENST00000491421 UMPSP11172 480 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 IFNGR1P15260 489 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 B4GALT1P15291 398 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 NPR2P20594 1047 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 USF1P22415 310 aaPredicted RBP7.16□□□□□ -1.26
LSM2-213ENST00000491421 THBS4P35443 961 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 PPOXP50336 477 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 PDLIM4P50479 330 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 ARFIP2P53365 341 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 CRYBA2P53672 197 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 BIDP55957 195 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 VLDLRP98155 873 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 SF3A3Q12874 501 aaKnown RBP eCLIP7.16□□□□□ -1.26
LSM2-213ENST00000491421 SNTB2Q13425 540 aaKnown RBP7.16□□□□□ -1.26
LSM2-213ENST00000491421 MAPRE2Q15555 327 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 CARTPTQ16568 116 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 GSG1Q2KHT4 349 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 MMEL1Q495T6 779 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 COQ5Q5HYK3 327 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 C6orf52Q5T4I8 152 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 REP15Q6BDI9 236 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 SLC35D2Q76EJ3 337 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 CCDC80Q76M96 950 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 HIST3H2AQ7L7L0 130 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 ZNF627Q7L945 461 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 SPATA21Q7Z572 469 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 TSPYL5Q86VY4 417 aaPredicted RBP7.16□□□□□ -1.26
LSM2-213ENST00000491421 WDFY1Q8IWB7 410 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 SVOPLQ8N434 492 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 IL17RDQ8NFM7 739 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 OR8J3Q8NGG0 315 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 HIST1H2ACQ93077 130 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 LRRC58Q96CX6 371 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 FOXB1Q99853 325 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 ECSITQ9BQ95 431 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 PIMREGQ9BSJ6 248 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 SLC19A3Q9BZV2 496 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 PCDHAC1Q9H158 963 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 NOX3Q9HBY0 568 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 MYOZ1Q9NP98 299 aaPredicted RBP7.16□□□□□ -1.26
LSM2-213ENST00000491421 NANSQ9NR45 359 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 FGFR1OP2Q9NVK5 253 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 B3GNT2Q9NY97 397 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 FBXO9Q9UK97 447 aaPredicted RBP7.16□□□□□ -1.26
LSM2-213ENST00000491421 BAG5Q9UL15 447 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 SH3GLB1Q9Y371 365 aa7.16□□□□□ -1.26
LSM2-213ENST00000491421 SONP18583 2426 aaKnown RBP7.16□□□□□ -1.26
LSM2-213ENST00000491421 LOC390937A0A1W2PQ73 354 aa7.15□□□□□ -1.26
LSM2-213ENST00000491421 hCG_2039718K7EN88 272 aa7.15□□□□□ -1.26
LSM2-213ENST00000491421 NDUFS8O00217 210 aa7.15□□□□□ -1.26
LSM2-213ENST00000491421 RAB36O95755 333 aa7.15□□□□□ -1.26
LSM2-213ENST00000491421 NPPAP01160 153 aa7.15□□□□□ -1.26
LSM2-213ENST00000491421 IFNA14P01570 189 aa7.15□□□□□ -1.26
LSM2-213ENST00000491421 NR4A2P43354 598 aa7.15□□□□□ -1.26
LSM2-213ENST00000491421 GIPRP48546 466 aa7.15□□□□□ -1.26
LSM2-213ENST00000491421 PTDSS1P48651 473 aaKnown RBP7.15□□□□□ -1.26
LSM2-213ENST00000491421 LSM11P83369 360 aaKnown RBP eCLIP7.15□□□□□ -1.26
LSM2-213ENST00000491421 PIGFQ07326 219 aa7.15□□□□□ -1.26
LSM2-213ENST00000491421 ZP4Q12836 540 aa7.15□□□□□ -1.26
LSM2-213ENST00000491421 KLF10Q13118 480 aa7.15□□□□□ -1.26
LSM2-213ENST00000491421 DAG1Q14118 895 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms