RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 GMEB1Q9Y692 573 aa17.07■□□□□ 0.32
SREBF1-216ENST00000490796 RAB36O95755 333 aa17.06■□□□□ 0.32
SREBF1-216ENST00000490796 VIMP08670 466 aaKnown RBP17.06■□□□□ 0.32
SREBF1-216ENST00000490796 LSP1P33241 339 aa17.06■□□□□ 0.32
SREBF1-216ENST00000490796 GALK2Q01415 458 aa17.06■□□□□ 0.32
SREBF1-216ENST00000490796 PIGFQ07326 219 aa17.06■□□□□ 0.32
SREBF1-216ENST00000490796 CAMK2DQ13557 499 aa17.06■□□□□ 0.32
SREBF1-216ENST00000490796 PHYHD1Q5SRE7 291 aa17.06■□□□□ 0.32
SREBF1-216ENST00000490796 FAM120AOSQ5T036 256 aa17.06■□□□□ 0.32
SREBF1-216ENST00000490796 GKAP1Q5VSY0 366 aaPredicted RBP17.06■□□□□ 0.32
SREBF1-216ENST00000490796 SMYD1Q8NB12 490 aa17.06■□□□□ 0.32
SREBF1-216ENST00000490796 TXNDC15Q96J42 360 aa17.06■□□□□ 0.32
SREBF1-216ENST00000490796 MCHR1Q99705 422 aa17.06■□□□□ 0.32
SREBF1-216ENST00000490796 RSPO3Q9BXY4 272 aaPredicted RBP17.06■□□□□ 0.32
SREBF1-216ENST00000490796 IKZF5Q9H5V7 419 aa17.06■□□□□ 0.32
SREBF1-216ENST00000490796 TRBV5-3A0A0A0MS03 114 aa17.05■□□□□ 0.32
SREBF1-216ENST00000490796 ZNF503-AS2A6NEH8 195 aa17.05■□□□□ 0.32
SREBF1-216ENST00000490796 ANGPT2O15123 496 aa17.05■□□□□ 0.32
SREBF1-216ENST00000490796 MFN2O95140 757 aa17.05■□□□□ 0.32
SREBF1-216ENST00000490796 MT-ATP6P00846 226 aa17.05■□□□□ 0.32
SREBF1-216ENST00000490796 C8BP07358 591 aa17.05■□□□□ 0.32
SREBF1-216ENST00000490796 ADRA2AP08913 450 aa17.05■□□□□ 0.32
SREBF1-216ENST00000490796 ADORA3P0DMS8 318 aa17.05■□□□□ 0.32
SREBF1-216ENST00000490796 CSNK1A1P48729 337 aa17.05■□□□□ 0.32
SREBF1-216ENST00000490796 CHN2P52757 468 aa17.05■□□□□ 0.32
SREBF1-216ENST00000490796 RBBP4Q09028 425 aa17.05■□□□□ 0.32
SREBF1-216ENST00000490796 ZNF613Q6PF04 617 aa17.05■□□□□ 0.32
SREBF1-216ENST00000490796 IL17RELQ6ZVW7 336 aa17.05■□□□□ 0.32
SREBF1-216ENST00000490796 PXKQ7Z7A4 578 aa17.05■□□□□ 0.32
SREBF1-216ENST00000490796 DHDDSQ86SQ9 333 aa17.05■□□□□ 0.32
SREBF1-216ENST00000490796 ZCCHC24Q8N2G6 241 aaKnown RBP17.05■□□□□ 0.32
SREBF1-216ENST00000490796 UBASH3BQ8TF42 649 aa17.05■□□□□ 0.32
SREBF1-216ENST00000490796 ATP6V1G3Q96LB4 118 aa17.05■□□□□ 0.32
SREBF1-216ENST00000490796 MOGAT1Q96PD6 335 aa17.05■□□□□ 0.32
SREBF1-216ENST00000490796 CPPED1Q9BRF8 314 aaPredicted RBP17.05■□□□□ 0.32
SREBF1-216ENST00000490796 SLC52A3Q9NQ40 469 aa17.05■□□□□ 0.32
SREBF1-216ENST00000490796 NDUFAF1Q9Y375 327 aa17.05■□□□□ 0.32
SREBF1-216ENST00000490796 LRRN3E7EW58 273 aa17.04■□□□□ 0.32
SREBF1-216ENST00000490796 C11orf98E9PRG8 122 aa17.04■□□□□ 0.32
SREBF1-216ENST00000490796 M0R3H8 397 aa17.04■□□□□ 0.32
SREBF1-216ENST00000490796 PLPP3O14495 311 aa17.04■□□□□ 0.32
SREBF1-216ENST00000490796 FMO6PO60774 539 aa17.04■□□□□ 0.32
SREBF1-216ENST00000490796 ENTPD5O75356 428 aa17.04■□□□□ 0.32
SREBF1-216ENST00000490796 IFNGR1P15260 489 aa17.04■□□□□ 0.32
SREBF1-216ENST00000490796 B4GALT1P15291 398 aa17.04■□□□□ 0.32
SREBF1-216ENST00000490796 NR4A1P22736 598 aa17.04■□□□□ 0.32
SREBF1-216ENST00000490796 THBS2P35442 1172 aa17.04■□□□□ 0.32
SREBF1-216ENST00000490796 PTDSS1P48651 473 aaKnown RBP17.04■□□□□ 0.32
SREBF1-216ENST00000490796 RUNDC3AQ59EK9 446 aa17.04■□□□□ 0.32
SREBF1-216ENST00000490796 CDK20Q8IZL9 346 aa17.04■□□□□ 0.32
SREBF1-216ENST00000490796 OR5J2Q8NH18 312 aa17.04■□□□□ 0.32
SREBF1-216ENST00000490796 SLC26A7Q8TE54 656 aa17.04■□□□□ 0.32
SREBF1-216ENST00000490796 FOXB1Q99853 325 aa17.04■□□□□ 0.32
SREBF1-216ENST00000490796 DENND2DQ9H6A0 471 aaPredicted RBP17.04■□□□□ 0.32
SREBF1-216ENST00000490796 B3GNT2Q9NY97 397 aa17.04■□□□□ 0.32
SREBF1-216ENST00000490796 FBXL3Q9UKT7 428 aa17.04■□□□□ 0.32
SREBF1-216ENST00000490796 TRIM33Q9UPN9 1127 aa17.04■□□□□ 0.32
SREBF1-216ENST00000490796 CUBNO60494 3623 aa17.03■□□□□ 0.32
SREBF1-216ENST00000490796 LRP5LA4QPB2 252 aa17.03■□□□□ 0.32
SREBF1-216ENST00000490796 M0QX08 132 aa17.03■□□□□ 0.32
SREBF1-216ENST00000490796 UBL3O95164 117 aa17.03■□□□□ 0.32
SREBF1-216ENST00000490796 HIST1H2ABP04908 130 aa17.03■□□□□ 0.32
SREBF1-216ENST00000490796 GIFP27352 417 aa17.03■□□□□ 0.32
SREBF1-216ENST00000490796 APEX1P27695 318 aaKnown RBP17.03■□□□□ 0.32
SREBF1-216ENST00000490796 GIPRP48546 466 aa17.03■□□□□ 0.32
SREBF1-216ENST00000490796 BIDP55957 195 aa17.03■□□□□ 0.32
SREBF1-216ENST00000490796 RPS23P62266 143 aaKnown RBP17.03■□□□□ 0.32
SREBF1-216ENST00000490796 RAB1AP62820 205 aa17.03■□□□□ 0.32
SREBF1-216ENST00000490796 TTC33Q6PID6 262 aaPredicted RBP17.03■□□□□ 0.32
SREBF1-216ENST00000490796 DLEU7Q6UYE1 221 aa17.03■□□□□ 0.32
SREBF1-216ENST00000490796 HIST3H2AQ7L7L0 130 aa17.03■□□□□ 0.32
SREBF1-216ENST00000490796 ZNF786Q8N393 782 aa17.03■□□□□ 0.32
SREBF1-216ENST00000490796 HIST1H2ACQ93077 130 aa17.03■□□□□ 0.32
SREBF1-216ENST00000490796 MS4A3Q96HJ5 214 aa17.03■□□□□ 0.32
SREBF1-216ENST00000490796 TPK1Q9H3S4 243 aa17.03■□□□□ 0.32
SREBF1-216ENST00000490796 INTS9Q9NV88 658 aaKnown RBP17.03■□□□□ 0.32
SREBF1-216ENST00000490796 TMEM129A0AVI4 362 aa17.02■□□□□ 0.32
SREBF1-216ENST00000490796 CPSF4LA6NMK7 179 aaKnown RBP17.02■□□□□ 0.32
SREBF1-216ENST00000490796 M0R233 179 aa17.02■□□□□ 0.32
SREBF1-216ENST00000490796 RNF13O43567 381 aa17.02■□□□□ 0.32
SREBF1-216ENST00000490796 CHP2O43745 196 aa17.02■□□□□ 0.32
SREBF1-216ENST00000490796 SYNGR3O43761 229 aa17.02■□□□□ 0.32
SREBF1-216ENST00000490796 TPST2O60704 377 aa17.02■□□□□ 0.32
SREBF1-216ENST00000490796 OPN1SWP03999 348 aa17.02■□□□□ 0.32
SREBF1-216ENST00000490796 EVX1P49640 407 aa17.02■□□□□ 0.32
SREBF1-216ENST00000490796 UGT2A3Q6UWM9 527 aa17.02■□□□□ 0.32
SREBF1-216ENST00000490796 PATL1Q86TB9 770 aaKnown RBP17.02■□□□□ 0.32
SREBF1-216ENST00000490796 SLC30A8Q8IWU4 369 aa17.02■□□□□ 0.32
SREBF1-216ENST00000490796 VANGL1Q8TAA9 524 aaPredicted RBP17.02■□□□□ 0.32
SREBF1-216ENST00000490796 HPS1Q92902 700 aa17.02■□□□□ 0.32
SREBF1-216ENST00000490796 MRPL24Q96A35 216 aaKnown RBP17.02■□□□□ 0.32
SREBF1-216ENST00000490796 SNX18Q96RF0 628 aa17.02■□□□□ 0.32
SREBF1-216ENST00000490796 ARHGDIGQ99819 225 aa17.02■□□□□ 0.32
SREBF1-216ENST00000490796 WFDC6Q9BQY6 131 aa17.02■□□□□ 0.32
SREBF1-216ENST00000490796 MS4A5Q9H3V2 200 aa17.02■□□□□ 0.32
SREBF1-216ENST00000490796 REV1Q9UBZ9 1251 aa17.02■□□□□ 0.32
SREBF1-216ENST00000490796 CH25HO95992 272 aa17.01■□□□□ 0.31
SREBF1-216ENST00000490796 UMPSP11172 480 aa17.01■□□□□ 0.31
SREBF1-216ENST00000490796 GLRXP35754 106 aa17.01■□□□□ 0.31
SREBF1-216ENST00000490796 SRP14P37108 136 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms