RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 MRPL39Q9NYK5 338 aaKnown RBP18.16■□□□□ 0.5
SYNE4-205ENST00000490730 C11orf98E9PRG8 122 aa18.15■□□□□ 0.5
SYNE4-205ENST00000490730 ANGPT2O15123 496 aa18.15■□□□□ 0.5
SYNE4-205ENST00000490730 PHF1O43189 567 aaPredicted RBP18.15■□□□□ 0.5
SYNE4-205ENST00000490730 B4GALT1P15291 398 aa18.15■□□□□ 0.5
SYNE4-205ENST00000490730 SELPLGQ14242 412 aa18.15■□□□□ 0.5
SYNE4-205ENST00000490730 GSG1Q2KHT4 349 aa18.15■□□□□ 0.5
SYNE4-205ENST00000490730 SWT1Q5T5J6 900 aaKnown RBP18.15■□□□□ 0.5
SYNE4-205ENST00000490730 IL17RELQ6ZVW7 336 aa18.15■□□□□ 0.5
SYNE4-205ENST00000490730 PTOV1Q86YD1 416 aa18.15■□□□□ 0.5
SYNE4-205ENST00000490730 PHC2Q8IXK0 858 aa18.15■□□□□ 0.5
SYNE4-205ENST00000490730 TMEM158Q8WZ71 300 aa18.15■□□□□ 0.5
SYNE4-205ENST00000490730 TMEM43Q9BTV4 400 aa18.15■□□□□ 0.5
SYNE4-205ENST00000490730 BPESC1Q9GZL8 116 aa18.15■□□□□ 0.5
SYNE4-205ENST00000490730 EVA1AQ9H8M9 152 aa18.15■□□□□ 0.5
SYNE4-205ENST00000490730 FBXO9Q9UK97 447 aaPredicted RBP18.15■□□□□ 0.5
SYNE4-205ENST00000490730 NDUFAF1Q9Y375 327 aa18.15■□□□□ 0.5
SYNE4-205ENST00000490730 CPSF4LA6NMK7 179 aaKnown RBP18.14■□□□□ 0.49
SYNE4-205ENST00000490730 PLPP3O14495 311 aa18.14■□□□□ 0.49
SYNE4-205ENST00000490730 OR6A2O95222 327 aa18.14■□□□□ 0.49
SYNE4-205ENST00000490730 ADORA3P0DMS8 318 aa18.14■□□□□ 0.49
SYNE4-205ENST00000490730 DAOP14920 347 aa18.14■□□□□ 0.49
SYNE4-205ENST00000490730 IGFBP5P24593 272 aa18.14■□□□□ 0.49
SYNE4-205ENST00000490730 WDFY1Q8IWB7 410 aa18.14■□□□□ 0.49
SYNE4-205ENST00000490730 CDK20Q8IZL9 346 aa18.14■□□□□ 0.49
SYNE4-205ENST00000490730 ZNF540Q8NDQ6 660 aa18.14■□□□□ 0.49
SYNE4-205ENST00000490730 IL17RDQ8NFM7 739 aa18.14■□□□□ 0.49
SYNE4-205ENST00000490730 VANGL1Q8TAA9 524 aaPredicted RBP18.14■□□□□ 0.49
SYNE4-205ENST00000490730 CKAP2Q8WWK9 683 aa18.14■□□□□ 0.49
SYNE4-205ENST00000490730 MSI2Q96DH6 328 aaKnown RBP18.14■□□□□ 0.49
SYNE4-205ENST00000490730 MS4A3Q96HJ5 214 aa18.14■□□□□ 0.49
SYNE4-205ENST00000490730 LRR1Q96L50 414 aa18.14■□□□□ 0.49
SYNE4-205ENST00000490730 ARHGDIGQ99819 225 aa18.14■□□□□ 0.49
SYNE4-205ENST00000490730 M0QX08 132 aa18.13■□□□□ 0.49
SYNE4-205ENST00000490730 PTDSS1P48651 473 aaKnown RBP18.13■□□□□ 0.49
SYNE4-205ENST00000490730 CSNK1A1P48729 337 aa18.13■□□□□ 0.49
SYNE4-205ENST00000490730 BIDP55957 195 aa18.13■□□□□ 0.49
SYNE4-205ENST00000490730 PCBP3P57721 371 aaKnown RBP18.13■□□□□ 0.49
SYNE4-205ENST00000490730 NFYCQ13952 458 aa18.13■□□□□ 0.49
SYNE4-205ENST00000490730 DUSP7Q16829 419 aa18.13■□□□□ 0.49
SYNE4-205ENST00000490730 ZNF613Q6PF04 617 aa18.13■□□□□ 0.49
SYNE4-205ENST00000490730 PXKQ7Z7A4 578 aa18.13■□□□□ 0.49
SYNE4-205ENST00000490730 SNX32Q86XE0 403 aa18.13■□□□□ 0.49
SYNE4-205ENST00000490730 OR6T1Q8NGN1 323 aa18.13■□□□□ 0.49
SYNE4-205ENST00000490730 OR5J2Q8NH18 312 aa18.13■□□□□ 0.49
SYNE4-205ENST00000490730 CGREF1Q99674 301 aa18.13■□□□□ 0.49
SYNE4-205ENST00000490730 DOK1Q99704 481 aa18.13■□□□□ 0.49
SYNE4-205ENST00000490730 B3GNT2Q9NY97 397 aa18.13■□□□□ 0.49
SYNE4-205ENST00000490730 TRIM33Q9UPN9 1127 aa18.13■□□□□ 0.49
SYNE4-205ENST00000490730 CMAHPQ9Y471 501 aa18.13■□□□□ 0.49
SYNE4-205ENST00000490730 KPNA4O00629 521 aaPredicted RBP18.12■□□□□ 0.49
SYNE4-205ENST00000490730 CHP2O43745 196 aa18.12■□□□□ 0.49
SYNE4-205ENST00000490730 FMO6PO60774 539 aa18.12■□□□□ 0.49
SYNE4-205ENST00000490730 STAMBPO95630 424 aa18.12■□□□□ 0.49
SYNE4-205ENST00000490730 RAB36O95755 333 aa18.12■□□□□ 0.49
SYNE4-205ENST00000490730 MT-ATP6P00846 226 aa18.12■□□□□ 0.49
SYNE4-205ENST00000490730 ADRA2AP08913 450 aa18.12■□□□□ 0.49
SYNE4-205ENST00000490730 IFNGR1P15260 489 aa18.12■□□□□ 0.49
SYNE4-205ENST00000490730 ZNF23P17027 643 aa18.12■□□□□ 0.49
SYNE4-205ENST00000490730 SRD5A1P18405 259 aa18.12■□□□□ 0.49
SYNE4-205ENST00000490730 RBBP4Q09028 425 aa18.12■□□□□ 0.49
SYNE4-205ENST00000490730 NPTX1Q15818 432 aa18.12■□□□□ 0.49
SYNE4-205ENST00000490730 TRMT5Q32P41 509 aaKnown RBP18.12■□□□□ 0.49
SYNE4-205ENST00000490730 ENTPD8Q5MY95 495 aa18.12■□□□□ 0.49
SYNE4-205ENST00000490730 RETREG3Q86VR2 466 aa18.12■□□□□ 0.49
SYNE4-205ENST00000490730 GPR32P1Q8NGA4 272 aa18.12■□□□□ 0.49
SYNE4-205ENST00000490730 SLC26A7Q8TE54 656 aa18.12■□□□□ 0.49
SYNE4-205ENST00000490730 NEU4Q8WWR8 484 aaPredicted RBP18.12■□□□□ 0.49
SYNE4-205ENST00000490730 FOXB1Q99853 325 aa18.12■□□□□ 0.49
SYNE4-205ENST00000490730 TPK1Q9H3S4 243 aa18.12■□□□□ 0.49
SYNE4-205ENST00000490730 NPHS2Q9NP85 383 aa18.12■□□□□ 0.49
SYNE4-205ENST00000490730 SVEP1Q4LDE5 3571 aa18.11■□□□□ 0.49
SYNE4-205ENST00000490730 TMEM129A0AVI4 362 aa18.11■□□□□ 0.49
SYNE4-205ENST00000490730 LRP5LA4QPB2 252 aa18.11■□□□□ 0.49
SYNE4-205ENST00000490730 CH25HO95992 272 aa18.11■□□□□ 0.49
SYNE4-205ENST00000490730 TGFAP01135 160 aa18.11■□□□□ 0.49
SYNE4-205ENST00000490730 NR4A1P22736 598 aa18.11■□□□□ 0.49
SYNE4-205ENST00000490730 GIPRP48546 466 aa18.11■□□□□ 0.49
SYNE4-205ENST00000490730 FAM120AOSQ5T036 256 aa18.11■□□□□ 0.49
SYNE4-205ENST00000490730 GKAP1Q5VSY0 366 aaPredicted RBP18.11■□□□□ 0.49
SYNE4-205ENST00000490730 TTC33Q6PID6 262 aaPredicted RBP18.11■□□□□ 0.49
SYNE4-205ENST00000490730 WDR88Q6ZMY6 472 aa18.11■□□□□ 0.49
SYNE4-205ENST00000490730 RBM45Q8IUH3 476 aaKnown RBP18.11■□□□□ 0.49
SYNE4-205ENST00000490730 DPP10Q8N608 796 aa18.11■□□□□ 0.49
SYNE4-205ENST00000490730 MAGEB18Q96M61 343 aa18.11■□□□□ 0.49
SYNE4-205ENST00000490730 SLC7A7Q9UM01 511 aa18.11■□□□□ 0.49
SYNE4-205ENST00000490730 SPEF1Q9Y4P9 236 aa18.11■□□□□ 0.49
SYNE4-205ENST00000490730 RNF13O43567 381 aa18.1■□□□□ 0.49
SYNE4-205ENST00000490730 C8BP07358 591 aa18.1■□□□□ 0.49
SYNE4-205ENST00000490730 HNF1AP20823 631 aa18.1■□□□□ 0.49
SYNE4-205ENST00000490730 GALK2Q01415 458 aa18.1■□□□□ 0.49
SYNE4-205ENST00000490730 NHLRC1Q6VVB1 395 aa18.1■□□□□ 0.49
SYNE4-205ENST00000490730 SLC35D2Q76EJ3 337 aa18.1■□□□□ 0.49
SYNE4-205ENST00000490730 PATL1Q86TB9 770 aaKnown RBP18.1■□□□□ 0.49
SYNE4-205ENST00000490730 ADAMTS16Q8TE57 1224 aa18.1■□□□□ 0.49
SYNE4-205ENST00000490730 MRPL37Q9BZE1 423 aaKnown RBP18.1■□□□□ 0.49
SYNE4-205ENST00000490730 NANSQ9NR45 359 aa18.1■□□□□ 0.49
SYNE4-205ENST00000490730 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.1■□□□□ 0.492e-6■■■■■ 27.4
SYNE4-205ENST00000490730 A0A0G2JND7 137 aa18.09■□□□□ 0.49
SYNE4-205ENST00000490730 HMGB1P1B2RPK0 211 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms