RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 OR9A4Q8NGU2 314 aa11.79□□□□□ -0.52
SHOX2-205ENST00000490689 RAB7BQ96AH8 199 aa11.79□□□□□ -0.52
SHOX2-205ENST00000490689 ZFYVE21Q9BQ24 234 aa11.79□□□□□ -0.52
SHOX2-205ENST00000490689 ZNF649Q9BS31 505 aa11.79□□□□□ -0.52
SHOX2-205ENST00000490689 FBXO34Q9NWN3 711 aa11.79□□□□□ -0.52
SHOX2-205ENST00000490689 TMEM235A6NFC5 223 aa11.79□□□□□ -0.52
SHOX2-205ENST00000490689 RNGTTO60942 597 aaKnown RBP11.79□□□□□ -0.52
SHOX2-205ENST00000490689 APOC1P02654 83 aa11.79□□□□□ -0.52
SHOX2-205ENST00000490689 SERPINA5P05154 406 aa11.79□□□□□ -0.52
SHOX2-205ENST00000490689 GAAP10253 952 aa11.79□□□□□ -0.52
SHOX2-205ENST00000490689 EPHA4P54764 986 aa11.79□□□□□ -0.52
SHOX2-205ENST00000490689 MEP1BQ16820 701 aa11.79□□□□□ -0.52
SHOX2-205ENST00000490689 PXKQ7Z7A4 578 aa11.79□□□□□ -0.52
SHOX2-205ENST00000490689 MUC20Q8N307 709 aaPredicted RBP11.79□□□□□ -0.52
SHOX2-205ENST00000490689 OR10Z1Q8NGY1 313 aa11.79□□□□□ -0.52
SHOX2-205ENST00000490689 EVA1AQ9H8M9 152 aa11.79□□□□□ -0.52
SHOX2-205ENST00000490689 APMAPQ9HDC9 416 aa11.79□□□□□ -0.52
SHOX2-205ENST00000490689 ZNF337Q9Y3M9 751 aa11.79□□□□□ -0.52
SHOX2-205ENST00000490689 RBM7Q9Y580 266 aaKnown RBP11.79□□□□□ -0.52
SHOX2-205ENST00000490689 PLPP2O43688 288 aa11.78□□□□□ -0.52
SHOX2-205ENST00000490689 GLAP06280 429 aa11.78□□□□□ -0.52
SHOX2-205ENST00000490689 PCBP4P57723 403 aaKnown RBP11.78□□□□□ -0.52
SHOX2-205ENST00000490689 RPS21P63220 83 aaKnown RBP11.78□□□□□ -0.52
SHOX2-205ENST00000490689 EBPQ15125 230 aaKnown RBP11.78□□□□□ -0.52
SHOX2-205ENST00000490689 METRNLQ641Q3 311 aa11.78□□□□□ -0.52
SHOX2-205ENST00000490689 ADAM5Q6NVV9 412 aa11.78□□□□□ -0.52
SHOX2-205ENST00000490689 STAC2Q6ZMT1 411 aa11.78□□□□□ -0.52
SHOX2-205ENST00000490689 ENKD1Q9H0I2 346 aa11.78□□□□□ -0.52
SHOX2-205ENST00000490689 MBNL1Q9NR56 388 aaKnown RBP11.78□□□□□ -0.52
SHOX2-205ENST00000490689 ANK1P16157 1881 aa11.78□□□□□ -0.52
SHOX2-205ENST00000490689 SLC33A1O00400 549 aaPredicted RBP11.78□□□□□ -0.52
SHOX2-205ENST00000490689 CEBPBP17676 345 aa11.78□□□□□ -0.52
SHOX2-205ENST00000490689 CAMLGP49069 296 aa11.78□□□□□ -0.52
SHOX2-205ENST00000490689 ZNF776Q68DI1 518 aaPredicted RBP11.78□□□□□ -0.52
SHOX2-205ENST00000490689 TRAPPC6BQ86SZ2 158 aa11.78□□□□□ -0.52
SHOX2-205ENST00000490689 C14orf79Q96F83 325 aa11.78□□□□□ -0.52
SHOX2-205ENST00000490689 ZNF587Q96SQ5 575 aaPredicted RBP11.78□□□□□ -0.52
SHOX2-205ENST00000490689 ADOQ96SZ5 270 aa11.78□□□□□ -0.52
SHOX2-205ENST00000490689 EPHX3Q9H6B9 360 aa11.78□□□□□ -0.52
SHOX2-205ENST00000490689 ZNF629Q9UEG4 869 aaPredicted RBP11.78□□□□□ -0.52
SHOX2-205ENST00000490689 APOBEC3BQ9UH17 382 aaKnown RBP11.78□□□□□ -0.52
SHOX2-205ENST00000490689 C7orf66A4D0T2 115 aa11.78□□□□□ -0.52
SHOX2-205ENST00000490689 HIDE1A8MVS5 230 aa11.78□□□□□ -0.52
SHOX2-205ENST00000490689 SUSD5O60279 629 aa11.78□□□□□ -0.52
SHOX2-205ENST00000490689 SPI1P17947 270 aa11.78□□□□□ -0.52
SHOX2-205ENST00000490689 C21orf58P58505 322 aa11.78□□□□□ -0.52
SHOX2-205ENST00000490689 RIPPLY1Q0D2K3 151 aa11.78□□□□□ -0.52
SHOX2-205ENST00000490689 TMEM71Q6P5X7 295 aa11.78□□□□□ -0.52
SHOX2-205ENST00000490689 BPIFCQ8NFQ6 507 aa11.78□□□□□ -0.52
SHOX2-205ENST00000490689 OR5T2Q8NGG2 359 aa11.78□□□□□ -0.52
SHOX2-205ENST00000490689 SELENOIQ9C0D9 397 aa11.78□□□□□ -0.52
SHOX2-205ENST00000490689 GPR160Q9UJ42 338 aa11.78□□□□□ -0.52
SHOX2-205ENST00000490689 ZNF346Q9UL40 294 aaKnown RBP11.78□□□□□ -0.52
SHOX2-205ENST00000490689 SF3B6Q9Y3B4 125 aaKnown RBP11.78□□□□□ -0.52
SHOX2-205ENST00000490689 CABIN1Q9Y6J0 2220 aa11.78□□□□□ -0.52
SHOX2-205ENST00000490689 THSD7AQ9UPZ6 1657 aa11.77□□□□□ -0.52
SHOX2-205ENST00000490689 TSPAN11A1L157 253 aa11.77□□□□□ -0.52
SHOX2-205ENST00000490689 GPR31O00270 319 aa11.77□□□□□ -0.52
SHOX2-205ENST00000490689 KCNJ13O60928 360 aa11.77□□□□□ -0.52
SHOX2-205ENST00000490689 CTSAP10619 480 aa11.77□□□□□ -0.52
SHOX2-205ENST00000490689 MAOAP21397 527 aa11.77□□□□□ -0.52
SHOX2-205ENST00000490689 ARRB1P49407 418 aaPredicted RBP11.77□□□□□ -0.52
SHOX2-205ENST00000490689 CHRFAM7AQ494W8 412 aa11.77□□□□□ -0.52
SHOX2-205ENST00000490689 FBXO42Q6P3S6 717 aa11.77□□□□□ -0.52
SHOX2-205ENST00000490689 SEZ6L2Q6UXD5 910 aa11.77□□□□□ -0.52
SHOX2-205ENST00000490689 CD300LDQ6UXZ3 194 aa11.77□□□□□ -0.52
SHOX2-205ENST00000490689 LRRC69Q6ZNQ3 347 aa11.77□□□□□ -0.52
SHOX2-205ENST00000490689 IL17RCQ8NAC3 791 aa11.77□□□□□ -0.52
SHOX2-205ENST00000490689 OR2A1Q8NGT9 310 aa11.77□□□□□ -0.52
SHOX2-205ENST00000490689 PTP4A1Q93096 173 aa11.77□□□□□ -0.52
SHOX2-205ENST00000490689 PRRT1Q99946 306 aa11.77□□□□□ -0.52
SHOX2-205ENST00000490689 PARPBPQ9NWS1 579 aa11.77□□□□□ -0.52
SHOX2-205ENST00000490689 STEAP1Q9UHE8 339 aa11.77□□□□□ -0.52
SHOX2-205ENST00000490689 PRELID3BQ9Y3B1 194 aa11.77□□□□□ -0.52
SHOX2-205ENST00000490689 SULT1B1O43704 296 aa11.77□□□□□ -0.53
SHOX2-205ENST00000490689 ZFPL1O95159 310 aa11.77□□□□□ -0.53
SHOX2-205ENST00000490689 WDPCPO95876 746 aa11.77□□□□□ -0.53
SHOX2-205ENST00000490689 PI3P19957 117 aa11.77□□□□□ -0.53
SHOX2-205ENST00000490689 CBX5P45973 191 aa11.77□□□□□ -0.53
SHOX2-205ENST00000490689 LIMS1P48059 325 aa11.77□□□□□ -0.53
SHOX2-205ENST00000490689 RAB2AP61019 212 aa11.77□□□□□ -0.53
SHOX2-205ENST00000490689 RASGEF1BQ0VAM2 473 aa11.77□□□□□ -0.53
SHOX2-205ENST00000490689 CARD17Q5XLA6 110 aa11.77□□□□□ -0.53
SHOX2-205ENST00000490689 PNLDC1Q8NA58 520 aaKnown RBP11.77□□□□□ -0.53
SHOX2-205ENST00000490689 THRSPQ92748 146 aa11.77□□□□□ -0.53
SHOX2-205ENST00000490689 TOMM40LQ969M1 308 aa11.77□□□□□ -0.53
SHOX2-205ENST00000490689 SCGB3A2Q96PL1 93 aa11.77□□□□□ -0.53
SHOX2-205ENST00000490689 PFDN5Q99471 154 aa11.77□□□□□ -0.53
SHOX2-205ENST00000490689 SULT4A1Q9BR01 284 aa11.77□□□□□ -0.53
SHOX2-205ENST00000490689 PIGMQ9H3S5 423 aa11.77□□□□□ -0.53
SHOX2-205ENST00000490689 MEPEQ9NQ76 525 aaPredicted RBP11.77□□□□□ -0.53
SHOX2-205ENST00000490689 DZANK1Q9NVP4 752 aa11.77□□□□□ -0.53
SHOX2-205ENST00000490689 RPH3AQ9Y2J0 694 aaPredicted RBP11.77□□□□□ -0.53
SHOX2-205ENST00000490689 SERTM1A2A2V5 107 aa11.77□□□□□ -0.53
SHOX2-205ENST00000490689 H0YGG7 62 aa11.77□□□□□ -0.53
SHOX2-205ENST00000490689 OR4E1P0C645 316 aa11.77□□□□□ -0.53
SHOX2-205ENST00000490689 RNH1P13489 461 aaKnown RBP11.77□□□□□ -0.53
SHOX2-205ENST00000490689 CXCL2P19875 107 aa11.77□□□□□ -0.53
SHOX2-205ENST00000490689 MAOBP27338 520 aa11.77□□□□□ -0.53
SHOX2-205ENST00000490689 HTR2CP28335 458 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms