RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 DCAF12L2Q5VW00 463 aa6.99□□□□□ -1.29
USP39-216ENST00000490193 NHLRC1Q6VVB1 395 aa6.99□□□□□ -1.29
USP39-216ENST00000490193 SERPINA11Q86U17 422 aa6.99□□□□□ -1.29
USP39-216ENST00000490193 C20orf196Q8IYI0 205 aa6.99□□□□□ -1.29
USP39-216ENST00000490193 CLIP4Q8N3C7 705 aa6.99□□□□□ -1.29
USP39-216ENST00000490193 SYT14Q8NB59 555 aa6.99□□□□□ -1.29
USP39-216ENST00000490193 KIF18AQ8NI77 898 aa6.99□□□□□ -1.29
USP39-216ENST00000490193 ZNF417Q8TAU3 575 aa6.99□□□□□ -1.29
USP39-216ENST00000490193 TCP10LQ8TDR4 215 aa6.99□□□□□ -1.29
USP39-216ENST00000490193 UBLCP1Q8WVY7 318 aaPredicted RBP6.99□□□□□ -1.29
USP39-216ENST00000490193 SLC25A36Q96CQ1 311 aa6.99□□□□□ -1.29
USP39-216ENST00000490193 LRRC58Q96CX6 371 aa6.99□□□□□ -1.29
USP39-216ENST00000490193 KTI12Q96EK9 354 aaPredicted RBP6.99□□□□□ -1.29
USP39-216ENST00000490193 PANX1Q96RD7 426 aa6.99□□□□□ -1.29
USP39-216ENST00000490193 ZNF587Q96SQ5 575 aaPredicted RBP6.99□□□□□ -1.29
USP39-216ENST00000490193 SPATA9Q9BWV2 254 aa6.99□□□□□ -1.29
USP39-216ENST00000490193 P2RX2Q9UBL9 471 aa6.99□□□□□ -1.29
USP39-216ENST00000490193 OPN4Q9UHM6 478 aa6.99□□□□□ -1.29
USP39-216ENST00000490193 CORINQ9Y5Q5 1042 aa6.99□□□□□ -1.29
USP39-216ENST00000490193 CMYA5Q8N3K9 4069 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 NOTCH1P46531 2555 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 ARHGAP32A7KAX9 2087 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 PPIAL4EA0A075B759 164 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 PPIAL4CA0A0B4J2A2 164 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 A0A1W2PPW3 197 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 SLC22A23A1A5C7 686 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 POM121CA8CG34 1229 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 PPIAL4DF5H284 164 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 MS4A18H0YCH9 400 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 M0R3G1 203 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 UBL3O95164 117 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 KRT75O95678 551 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 RAB36O95755 333 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 SERPINA5P05154 406 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 PPIAL4FP0DN26 164 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 ARAFP10398 606 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 CD79AP11912 226 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 ZNF250P15622 560 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 NCF2P19878 526 aaPredicted RBP6.98□□□□□ -1.29
USP39-216ENST00000490193 CDKN2CP42773 168 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 ETV4P43268 484 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 MAGEB1P43366 347 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 PTDSS1P48651 473 aaKnown RBP6.98□□□□□ -1.29
USP39-216ENST00000490193 CRISP3P54108 245 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 RAB1AP62820 205 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 RELBQ01201 579 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 TEKQ02763 1124 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 ZP4Q12836 540 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 MFSD13AQ14CX5 517 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 LARS2Q15031 903 aaKnown RBP6.98□□□□□ -1.29
USP39-216ENST00000490193 CHI3L2Q15782 390 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 MS4A18Q3C1V0 323 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 GKAP1Q5VSY0 366 aaPredicted RBP6.98□□□□□ -1.29
USP39-216ENST00000490193 ATG16L1Q676U5 607 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 OGFOD2Q6N063 350 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 ZNF813Q6ZN06 617 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 H1FNTQ75WM6 255 aaPredicted RBP6.98□□□□□ -1.29
USP39-216ENST00000490193 DOK3Q7L591 496 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 NET1Q7Z628 596 aaPredicted RBP6.98□□□□□ -1.29
USP39-216ENST00000490193 SNX32Q86XE0 403 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 ZNF584Q8IVC4 421 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 GSPT2Q8IYD1 628 aaKnown RBP6.98□□□□□ -1.29
USP39-216ENST00000490193 OR6S1Q8NH40 331 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 PNPT1Q8TCS8 783 aaKnown RBP6.98□□□□□ -1.29
USP39-216ENST00000490193 MGARPQ8TDB4 240 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 SLC38A4Q969I6 547 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 TAAR8Q969N4 342 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 SLC41A3Q96GZ6 507 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 TEX37Q96LM6 180 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 FOXB1Q99853 325 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 SLITRK2Q9H156 845 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 ARMC7Q9H6L4 198 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 B3GAT2Q9NPZ5 323 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 HINT3Q9NQE9 182 aaKnown RBP6.98□□□□□ -1.29
USP39-216ENST00000490193 LGALS13Q9UHV8 139 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 DUSP13Q9UII6 198 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 GPR160Q9UJ42 338 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 IFT52Q9Y366 437 aa6.98□□□□□ -1.29
USP39-216ENST00000490193 IGKV1D-42A0A075B6H8 117 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 TRAV36DV7A0A075B6V5 113 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 IGHV1-69-2A0A0G2JMI3 117 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 A0A0G2JPF8 293 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 HNRNPCL2B2RXH8 293 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 HNRNPCL3B7ZW38 293 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 CLDN25C9JDP6 229 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 HNRNPCL1O60812 293 aaKnown RBP6.97□□□□□ -1.29
USP39-216ENST00000490193 BCHEP06276 602 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 MYZAPP0CAP1 466 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 ZCCHC18P0CG32 403 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 HNRNPCL4P0DMR1 293 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 B4GALT1P15291 398 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 LBPP18428 481 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 GRPRP30550 384 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 LSP1P33241 339 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 GIPRP48546 466 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 KLF3P57682 345 aaPredicted RBP6.97□□□□□ -1.29
USP39-216ENST00000490193 SELENOVP59797 346 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 IL13RA1P78552 427 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 CCL8P80075 99 aa6.97□□□□□ -1.29
USP39-216ENST00000490193 MVKQ03426 396 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms