RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 NDUFAF1Q9Y375 327 aa16.78■□□□□ 0.28
TNFRSF1B-202ENST00000489921 NOX1Q9Y5S8 564 aa16.78■□□□□ 0.28
TNFRSF1B-202ENST00000489921 hCG_2039718K7EN88 272 aa16.77■□□□□ 0.28
TNFRSF1B-202ENST00000489921 AKAP8O43823 692 aaKnown RBP16.77■□□□□ 0.28
TNFRSF1B-202ENST00000489921 IFNA2P01563 188 aa16.77■□□□□ 0.28
TNFRSF1B-202ENST00000489921 ZNF14P17017 642 aaPredicted RBP16.77■□□□□ 0.28
TNFRSF1B-202ENST00000489921 NPR2P20594 1047 aa16.77■□□□□ 0.28
TNFRSF1B-202ENST00000489921 CD247P20963 164 aa16.77■□□□□ 0.28
TNFRSF1B-202ENST00000489921 NPRL3Q12980 569 aa16.77■□□□□ 0.28
TNFRSF1B-202ENST00000489921 CAMK2DQ13557 499 aa16.77■□□□□ 0.28
TNFRSF1B-202ENST00000489921 GGTLC2Q14390 218 aa16.77■□□□□ 0.28
TNFRSF1B-202ENST00000489921 ENTPD8Q5MY95 495 aa16.77■□□□□ 0.28
TNFRSF1B-202ENST00000489921 MSI2Q96DH6 328 aaKnown RBP16.77■□□□□ 0.28
TNFRSF1B-202ENST00000489921 PIMREGQ9BSJ6 248 aa16.77■□□□□ 0.28
TNFRSF1B-202ENST00000489921 SOX7Q9BT81 388 aa16.77■□□□□ 0.28
TNFRSF1B-202ENST00000489921 TAS2R5Q9NYW4 299 aa16.77■□□□□ 0.28
TNFRSF1B-202ENST00000489921 SELENONQ9NZV5 590 aa16.77■□□□□ 0.28
TNFRSF1B-202ENST00000489921 USP22Q9UPT9 525 aa16.77■□□□□ 0.28
TNFRSF1B-202ENST00000489921 CHP2O43745 196 aa16.76■□□□□ 0.27
TNFRSF1B-202ENST00000489921 ZNF35P13682 527 aa16.76■□□□□ 0.27
TNFRSF1B-202ENST00000489921 PHC2Q8IXK0 858 aa16.76■□□□□ 0.27
TNFRSF1B-202ENST00000489921 SVOPLQ8N434 492 aa16.76■□□□□ 0.27
TNFRSF1B-202ENST00000489921 IL17RDQ8NFM7 739 aa16.76■□□□□ 0.27
TNFRSF1B-202ENST00000489921 OR5J2Q8NH18 312 aa16.76■□□□□ 0.27
TNFRSF1B-202ENST00000489921 TAMM41Q96BW9 452 aa16.76■□□□□ 0.27
TNFRSF1B-202ENST00000489921 ZNF426Q9BUY5 554 aa16.76■□□□□ 0.27
TNFRSF1B-202ENST00000489921 BPESC1Q9GZL8 116 aa16.76■□□□□ 0.27
TNFRSF1B-202ENST00000489921 MYOZ1Q9NP98 299 aaPredicted RBP16.76■□□□□ 0.27
TNFRSF1B-202ENST00000489921 SLC13A4Q9UKG4 626 aa16.76■□□□□ 0.27
TNFRSF1B-202ENST00000489921 CPSF4LA6NMK7 179 aaKnown RBP16.75■□□□□ 0.27
TNFRSF1B-202ENST00000489921 HMGB1P1B2RPK0 211 aaPredicted RBP16.75■□□□□ 0.27
TNFRSF1B-202ENST00000489921 FBP2O00757 339 aa16.75■□□□□ 0.27
TNFRSF1B-202ENST00000489921 LMX1BO60663 402 aa16.75■□□□□ 0.27
TNFRSF1B-202ENST00000489921 EDF1O60869 148 aaKnown RBP16.75■□□□□ 0.27
TNFRSF1B-202ENST00000489921 STAMBPO95630 424 aa16.75■□□□□ 0.27
TNFRSF1B-202ENST00000489921 MT-ATP6P00846 226 aa16.75■□□□□ 0.27
TNFRSF1B-202ENST00000489921 NR4A1P22736 598 aa16.75■□□□□ 0.27
TNFRSF1B-202ENST00000489921 AHCYP23526 432 aa16.75■□□□□ 0.27
TNFRSF1B-202ENST00000489921 IGFBP5P24593 272 aa16.75■□□□□ 0.27
TNFRSF1B-202ENST00000489921 CAPZA2P47755 286 aa16.75■□□□□ 0.27
TNFRSF1B-202ENST00000489921 GZMKP49863 264 aa16.75■□□□□ 0.27
TNFRSF1B-202ENST00000489921 PIGFQ07326 219 aa16.75■□□□□ 0.27
TNFRSF1B-202ENST00000489921 DAG1Q14118 895 aa16.75■□□□□ 0.27
TNFRSF1B-202ENST00000489921 ZNF74Q16587 644 aa16.75■□□□□ 0.27
TNFRSF1B-202ENST00000489921 CYP51A1Q16850 503 aa16.75■□□□□ 0.27
TNFRSF1B-202ENST00000489921 KRT80Q6KB66 452 aa16.75■□□□□ 0.27
TNFRSF1B-202ENST00000489921 ZNF813Q6ZN06 617 aa16.75■□□□□ 0.27
TNFRSF1B-202ENST00000489921 SPATA21Q7Z572 469 aa16.75■□□□□ 0.27
TNFRSF1B-202ENST00000489921 CDK20Q8IZL9 346 aa16.75■□□□□ 0.27
TNFRSF1B-202ENST00000489921 LRRC17Q8N6Y2 441 aa16.75■□□□□ 0.27
TNFRSF1B-202ENST00000489921 FGFBP3Q8TAT2 258 aa16.75■□□□□ 0.27
TNFRSF1B-202ENST00000489921 ADAMTS16Q8TE57 1224 aa16.75■□□□□ 0.27
TNFRSF1B-202ENST00000489921 TSPEARQ8WU66 669 aa16.75■□□□□ 0.27
TNFRSF1B-202ENST00000489921 TMEM54Q969K7 222 aa16.75■□□□□ 0.27
TNFRSF1B-202ENST00000489921 PCDHAC1Q9H158 963 aa16.75■□□□□ 0.27
TNFRSF1B-202ENST00000489921 RNF212BA8MTL3 300 aa16.74■□□□□ 0.27
TNFRSF1B-202ENST00000489921 C11orf98E9PRG8 122 aa16.74■□□□□ 0.27
TNFRSF1B-202ENST00000489921 ADORA3P0DMS8 318 aa16.74■□□□□ 0.27
TNFRSF1B-202ENST00000489921 CD79AP11912 226 aa16.74■□□□□ 0.27
TNFRSF1B-202ENST00000489921 IFNGR1P15260 489 aa16.74■□□□□ 0.27
TNFRSF1B-202ENST00000489921 B4GALT1P15291 398 aa16.74■□□□□ 0.27
TNFRSF1B-202ENST00000489921 GIFP27352 417 aa16.74■□□□□ 0.27
TNFRSF1B-202ENST00000489921 PCGF2P35227 344 aa16.74■□□□□ 0.27
TNFRSF1B-202ENST00000489921 BIDP55957 195 aa16.74■□□□□ 0.27
TNFRSF1B-202ENST00000489921 ZP4Q12836 540 aa16.74■□□□□ 0.27
TNFRSF1B-202ENST00000489921 SNTB2Q13425 540 aaKnown RBP16.74■□□□□ 0.27
TNFRSF1B-202ENST00000489921 CARTPTQ16568 116 aa16.74■□□□□ 0.27
TNFRSF1B-202ENST00000489921 GSG1Q2KHT4 349 aa16.74■□□□□ 0.27
TNFRSF1B-202ENST00000489921 C10orf53Q8N6V4 93 aa16.74■□□□□ 0.27
TNFRSF1B-202ENST00000489921 OR10A6Q8NH74 314 aa16.74■□□□□ 0.27
TNFRSF1B-202ENST00000489921 FOXB1Q99853 325 aa16.74■□□□□ 0.27
TNFRSF1B-202ENST00000489921 PRSS27Q9BQR3 290 aa16.74■□□□□ 0.27
TNFRSF1B-202ENST00000489921 BEX2Q9BXY8 128 aa16.74■□□□□ 0.27
TNFRSF1B-202ENST00000489921 ULBP2Q9BZM5 246 aa16.74■□□□□ 0.27
TNFRSF1B-202ENST00000489921 RAB1BQ9H0U4 201 aa16.74■□□□□ 0.27
TNFRSF1B-202ENST00000489921 NPHS2Q9NP85 383 aa16.74■□□□□ 0.27
TNFRSF1B-202ENST00000489921 POFUT2Q9Y2G5 429 aa16.74■□□□□ 0.27
TNFRSF1B-202ENST00000489921 SH3PXD2BA1X283 911 aa16.73■□□□□ 0.27
TNFRSF1B-202ENST00000489921 ZNF726A6NNF4 738 aa16.73■□□□□ 0.27
TNFRSF1B-202ENST00000489921 ANGPT2O15123 496 aa16.73■□□□□ 0.27
TNFRSF1B-202ENST00000489921 PHF1O43189 567 aaPredicted RBP16.73■□□□□ 0.27
TNFRSF1B-202ENST00000489921 SERPINI2O75830 405 aa16.73■□□□□ 0.27
TNFRSF1B-202ENST00000489921 CH25HO95992 272 aa16.73■□□□□ 0.27
TNFRSF1B-202ENST00000489921 APEHP13798 732 aaKnown RBP16.73■□□□□ 0.27
TNFRSF1B-202ENST00000489921 DAOP14920 347 aa16.73■□□□□ 0.27
TNFRSF1B-202ENST00000489921 ZNF23P17027 643 aa16.73■□□□□ 0.27
TNFRSF1B-202ENST00000489921 NFYCQ13952 458 aa16.73■□□□□ 0.27
TNFRSF1B-202ENST00000489921 LRFN4Q6PJG9 635 aa16.73■□□□□ 0.27
TNFRSF1B-202ENST00000489921 CCDC80Q76M96 950 aa16.73■□□□□ 0.27
TNFRSF1B-202ENST00000489921 ZNF584Q8IVC4 421 aa16.73■□□□□ 0.27
TNFRSF1B-202ENST00000489921 OR6N1Q8NGY5 312 aa16.73■□□□□ 0.27
TNFRSF1B-202ENST00000489921 OR6X1Q8NH79 312 aa16.73■□□□□ 0.27
TNFRSF1B-202ENST00000489921 VANGL1Q8TAA9 524 aaPredicted RBP16.73■□□□□ 0.27
TNFRSF1B-202ENST00000489921 MRPL37Q9BZE1 423 aaKnown RBP16.73■□□□□ 0.27
TNFRSF1B-202ENST00000489921 B3GAT2Q9NPZ5 323 aa16.73■□□□□ 0.27
TNFRSF1B-202ENST00000489921 FBXO9Q9UK97 447 aaPredicted RBP16.73■□□□□ 0.27
TNFRSF1B-202ENST00000489921 SLC7A7Q9UM01 511 aa16.73■□□□□ 0.27
TNFRSF1B-202ENST00000489921 LOC100289279A0A1B0GTE1 492 aa16.72■□□□□ 0.27
TNFRSF1B-202ENST00000489921 LILRA1O75019 489 aa16.72■□□□□ 0.27
TNFRSF1B-202ENST00000489921 ADRA2AP08913 450 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms