RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 A0A087WUJ7 227 aa10.12□□□□□ -0.79
ACTN4-206ENST00000489451 A0A0B4J2E0 115 aa10.12□□□□□ -0.79
ACTN4-206ENST00000489451 A0A1B0GX12 115 aa10.12□□□□□ -0.79
ACTN4-206ENST00000489451 SH3PXD2BA1X283 911 aa10.12□□□□□ -0.79
ACTN4-206ENST00000489451 SERPINB7O75635 380 aa10.12□□□□□ -0.79
ACTN4-206ENST00000489451 ADRA2AP08913 450 aa10.12□□□□□ -0.79
ACTN4-206ENST00000489451 ZNF35P13682 527 aa10.12□□□□□ -0.79
ACTN4-206ENST00000489451 ARR3P36575 388 aa10.12□□□□□ -0.79
ACTN4-206ENST00000489451 ARFIP2P53365 341 aa10.12□□□□□ -0.79
ACTN4-206ENST00000489451 CDH15P55291 814 aa10.12□□□□□ -0.79
ACTN4-206ENST00000489451 CDK6Q00534 326 aa10.12□□□□□ -0.79
ACTN4-206ENST00000489451 ALG10BQ5I7T1 473 aa10.12□□□□□ -0.79
ACTN4-206ENST00000489451 ELFN2Q5R3F8 820 aa10.12□□□□□ -0.79
ACTN4-206ENST00000489451 REEP3Q6NUK4 255 aa10.12□□□□□ -0.79
ACTN4-206ENST00000489451 TSPYL5Q86VY4 417 aaPredicted RBP10.12□□□□□ -0.79
ACTN4-206ENST00000489451 LRP11Q86VZ4 500 aa10.12□□□□□ -0.79
ACTN4-206ENST00000489451 ZNF584Q8IVC4 421 aa10.12□□□□□ -0.79
ACTN4-206ENST00000489451 GPR137CQ8N3F9 429 aa10.12□□□□□ -0.79
ACTN4-206ENST00000489451 PIK3C3Q8NEB9 887 aa10.12□□□□□ -0.79
ACTN4-206ENST00000489451 FGFBP3Q8TAT2 258 aa10.12□□□□□ -0.79
ACTN4-206ENST00000489451 NEU4Q8WWR8 484 aaPredicted RBP10.12□□□□□ -0.79
ACTN4-206ENST00000489451 SNX18Q96RF0 628 aa10.12□□□□□ -0.79
ACTN4-206ENST00000489451 ZNF607Q96SK3 696 aa10.12□□□□□ -0.79
ACTN4-206ENST00000489451 TMEM120AQ9BXJ8 343 aa10.12□□□□□ -0.79
ACTN4-206ENST00000489451 RAB1BQ9H0U4 201 aa10.12□□□□□ -0.79
ACTN4-206ENST00000489451 OCEL1Q9H607 264 aa10.12□□□□□ -0.79
ACTN4-206ENST00000489451 FGFR1OP2Q9NVK5 253 aa10.12□□□□□ -0.79
ACTN4-206ENST00000489451 SLC13A4Q9UKG4 626 aa10.12□□□□□ -0.79
ACTN4-206ENST00000489451 PRORSD1PA6NEY8 169 aa10.11□□□□□ -0.79
ACTN4-206ENST00000489451 WNT9BO14905 357 aa10.11□□□□□ -0.79
ACTN4-206ENST00000489451 OR2T1O43869 369 aa10.11□□□□□ -0.79
ACTN4-206ENST00000489451 LYPD3O95274 346 aa10.11□□□□□ -0.79
ACTN4-206ENST00000489451 THY1P04216 161 aa10.11□□□□□ -0.79
ACTN4-206ENST00000489451 GPX2P18283 190 aa10.11□□□□□ -0.79
ACTN4-206ENST00000489451 NR4A1P22736 598 aa10.11□□□□□ -0.79
ACTN4-206ENST00000489451 APEX1P27695 318 aaKnown RBP10.11□□□□□ -0.79
ACTN4-206ENST00000489451 GTF2E2P29084 291 aaKnown RBP10.11□□□□□ -0.79
ACTN4-206ENST00000489451 SEC24CP53992 1094 aa10.11□□□□□ -0.79
ACTN4-206ENST00000489451 GUCY1A3Q02108 690 aa10.11□□□□□ -0.79
ACTN4-206ENST00000489451 POU3F1Q03052 451 aaPredicted RBP10.11□□□□□ -0.79
ACTN4-206ENST00000489451 C1DQ13901 141 aaKnown RBP10.11□□□□□ -0.79
ACTN4-206ENST00000489451 NFYCQ13952 458 aa10.11□□□□□ -0.79
ACTN4-206ENST00000489451 DAG1Q14118 895 aa10.11□□□□□ -0.79
ACTN4-206ENST00000489451 MFSD13AQ14CX5 517 aa10.11□□□□□ -0.79
ACTN4-206ENST00000489451 MAPRE2Q15555 327 aa10.11□□□□□ -0.79
ACTN4-206ENST00000489451 OR1Q1Q15612 314 aa10.11□□□□□ -0.79
ACTN4-206ENST00000489451 FXNQ16595 210 aa10.11□□□□□ -0.79
ACTN4-206ENST00000489451 HIST2H2BDQ6DRA6 164 aa10.11□□□□□ -0.79
ACTN4-206ENST00000489451 WDR88Q6ZMY6 472 aa10.11□□□□□ -0.79
ACTN4-206ENST00000489451 DHDDSQ86SQ9 333 aa10.11□□□□□ -0.79
ACTN4-206ENST00000489451 DPP10Q8N608 796 aa10.11□□□□□ -0.79
ACTN4-206ENST00000489451 BHLHE22Q8NFJ8 381 aaPredicted RBP10.11□□□□□ -0.79
ACTN4-206ENST00000489451 OR6S1Q8NH40 331 aa10.11□□□□□ -0.79
ACTN4-206ENST00000489451 UBASH3BQ8TF42 649 aa10.11□□□□□ -0.79
ACTN4-206ENST00000489451 DNAJA4Q8WW22 397 aaPredicted RBP10.11□□□□□ -0.79
ACTN4-206ENST00000489451 MRPL24Q96A35 216 aaKnown RBP10.11□□□□□ -0.79
ACTN4-206ENST00000489451 SH3GL1Q99961 368 aa10.11□□□□□ -0.79
ACTN4-206ENST00000489451 TMEM38AQ9H6F2 299 aa10.11□□□□□ -0.79
ACTN4-206ENST00000489451 MOV10Q9HCE1 1003 aaKnown RBP10.11□□□□□ -0.79
ACTN4-206ENST00000489451 TESQ9UGI8 421 aaKnown RBP10.11□□□□□ -0.79
ACTN4-206ENST00000489451 ANGPT4Q9Y264 503 aa10.11□□□□□ -0.79
ACTN4-206ENST00000489451 PLPP3O14495 311 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 NCR1O76036 304 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 HPXP02790 462 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 B4GALT1P15291 398 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 AQP1P29972 269 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 CHN2P52757 468 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 CDH12P55289 794 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 PIGFQ07326 219 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 CYLC2Q14093 348 aaPredicted RBP10.1□□□□□ -0.79
ACTN4-206ENST00000489451 CCNIQ14094 377 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 SCARB2Q14108 478 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 MAD2L1BPQ15013 274 aaPredicted RBP10.1□□□□□ -0.79
ACTN4-206ENST00000489451 NPTX1Q15818 432 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 CYP51A1Q16850 503 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 MMEL1Q495T6 779 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 RUNDC3AQ59EK9 446 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 FAM91A1Q658Y4 838 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 ULK3Q6PHR2 472 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 C5orf46Q6UWT4 87 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 DLEU7Q6UYE1 221 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 LINC00114Q6XXX2 140 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 NET1Q7Z628 596 aaPredicted RBP10.1□□□□□ -0.79
ACTN4-206ENST00000489451 PTOV1Q86YD1 416 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 SLC30A8Q8IWU4 369 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 UEVLDQ8IX04 471 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 SCAIQ8N9R8 606 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 C11orf65Q8NCR3 313 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 ZNF540Q8NDQ6 660 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 HIPK4Q8NE63 616 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 GPR32P1Q8NGA4 272 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 OR4D11Q8NGI4 311 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 HPS1Q92902 700 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 YIPF5Q969M3 257 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 LRR1Q96L50 414 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 ANKRD27Q96NW4 1050 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 CGREF1Q99674 301 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 CPPED1Q9BRF8 314 aaPredicted RBP10.1□□□□□ -0.79
ACTN4-206ENST00000489451 RACGAP1Q9H0H5 632 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 ZNF385DQ9H6B1 395 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms