RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.25□□□□□ -0.13
CLDN11-208ENST00000488989 TOP3AQ13472 1001 aaPredicted RBP14.25□□□□□ -0.13
CLDN11-208ENST00000488989 C1DQ13901 141 aaKnown RBP14.25□□□□□ -0.13
CLDN11-208ENST00000488989 MELKQ14680 651 aa14.25□□□□□ -0.13
CLDN11-208ENST00000488989 RNPS1Q15287 305 aaKnown RBP14.25□□□□□ -0.13
CLDN11-208ENST00000488989 OCLNQ16625 522 aa14.25□□□□□ -0.13
CLDN11-208ENST00000488989 ACSF3Q4G176 576 aaPredicted RBP14.25□□□□□ -0.13
CLDN11-208ENST00000488989 AADACL4Q5VUY2 407 aa14.25□□□□□ -0.13
CLDN11-208ENST00000488989 GTF2IRD2BQ6EKJ0 949 aa14.25□□□□□ -0.13
CLDN11-208ENST00000488989 LAIR2Q6ISS4 152 aa14.25□□□□□ -0.13
CLDN11-208ENST00000488989 HDDC2Q7Z4H3 204 aa14.25□□□□□ -0.13
CLDN11-208ENST00000488989 GTF2IRD2Q86UP8 949 aa14.25□□□□□ -0.13
CLDN11-208ENST00000488989 OR52E2Q8NGJ4 325 aa14.25□□□□□ -0.13
CLDN11-208ENST00000488989 OR4K13Q8NH42 304 aa14.25□□□□□ -0.13
CLDN11-208ENST00000488989 ABHD3Q8WU67 409 aa14.25□□□□□ -0.13
CLDN11-208ENST00000488989 TMEM45BQ96B21 275 aa14.25□□□□□ -0.13
CLDN11-208ENST00000488989 PLEKHA8Q96JA3 519 aa14.25□□□□□ -0.13
CLDN11-208ENST00000488989 HINT3Q9NQE9 182 aaKnown RBP14.25□□□□□ -0.13
CLDN11-208ENST00000488989 MED29Q9NX70 200 aa14.25□□□□□ -0.13
CLDN11-208ENST00000488989 PCDHGB5Q9Y5G0 923 aa14.25□□□□□ -0.13
CLDN11-208ENST00000488989 NBEAQ8NFP9 2946 aa14.25□□□□□ -0.13
CLDN11-208ENST00000488989 FREM1Q5H8C1 2179 aa14.24□□□□□ -0.13
CLDN11-208ENST00000488989 SLC22A20A6NK97 555 aa14.24□□□□□ -0.13
CLDN11-208ENST00000488989 KDM4EB2RXH2 506 aaPredicted RBP14.24□□□□□ -0.13
CLDN11-208ENST00000488989 GPR171O14626 319 aa14.24□□□□□ -0.13
CLDN11-208ENST00000488989 TRMUO75648 421 aaKnown RBP14.24□□□□□ -0.13
CLDN11-208ENST00000488989 SERPINI2O75830 405 aa14.24□□□□□ -0.13
CLDN11-208ENST00000488989 ZNF432O94892 652 aa14.24□□□□□ -0.13
CLDN11-208ENST00000488989 TGM6O95932 706 aa14.24□□□□□ -0.13
CLDN11-208ENST00000488989 MLLT10P55197 1068 aa14.24□□□□□ -0.13
CLDN11-208ENST00000488989 BIDP55957 195 aa14.24□□□□□ -0.13
CLDN11-208ENST00000488989 CXCR4P61073 352 aa14.24□□□□□ -0.13
CLDN11-208ENST00000488989 ITGADQ13349 1161 aa14.24□□□□□ -0.13
CLDN11-208ENST00000488989 CRMP1Q14194 572 aa14.24□□□□□ -0.13
CLDN11-208ENST00000488989 MEDAGQ5VYS4 303 aa14.24□□□□□ -0.13
CLDN11-208ENST00000488989 NSUN5P2Q63ZY6 315 aa14.24□□□□□ -0.13
CLDN11-208ENST00000488989 KRT80Q6KB66 452 aa14.24□□□□□ -0.13
CLDN11-208ENST00000488989 GFRALQ6UXV0 394 aa14.24□□□□□ -0.13
CLDN11-208ENST00000488989 WDFY1Q8IWB7 410 aa14.24□□□□□ -0.13
CLDN11-208ENST00000488989 SDR9C7Q8NEX9 313 aa14.24□□□□□ -0.13
CLDN11-208ENST00000488989 OR5M9Q8NGP3 310 aa14.24□□□□□ -0.13
CLDN11-208ENST00000488989 HDAC2Q92769 488 aaKnown RBP14.24□□□□□ -0.13
CLDN11-208ENST00000488989 WNT2BQ93097 391 aa14.24□□□□□ -0.13
CLDN11-208ENST00000488989 ZNF385AQ96PM9 386 aaKnown RBP14.24□□□□□ -0.13
CLDN11-208ENST00000488989 IL4I1Q96RQ9 567 aa14.24□□□□□ -0.13
CLDN11-208ENST00000488989 KCNK17Q96T54 332 aa14.24□□□□□ -0.13
CLDN11-208ENST00000488989 MRPL13Q9BYD1 178 aaKnown RBP14.24□□□□□ -0.13
CLDN11-208ENST00000488989 PRRG4Q9BZD6 226 aa14.24□□□□□ -0.13
CLDN11-208ENST00000488989 NMNAT2Q9BZQ4 307 aa14.24□□□□□ -0.13
CLDN11-208ENST00000488989 GLRX2Q9NS18 164 aa14.24□□□□□ -0.13
CLDN11-208ENST00000488989 RASSF1Q9NS23 344 aa14.24□□□□□ -0.13
CLDN11-208ENST00000488989 VSX1Q9NZR4 365 aaPredicted RBP14.24□□□□□ -0.13
CLDN11-208ENST00000488989 RCE1Q9Y256 329 aa14.24□□□□□ -0.13
CLDN11-208ENST00000488989 PRSS37A4D1T9 235 aa14.23□□□□□ -0.13
CLDN11-208ENST00000488989 SH3D21A4FU49 640 aa14.23□□□□□ -0.13
CLDN11-208ENST00000488989 SLC35F4A4IF30 521 aa14.23□□□□□ -0.13
CLDN11-208ENST00000488989 OR6C68A6NDL8 312 aa14.23□□□□□ -0.13
CLDN11-208ENST00000488989 FIGNL2A6NMB9 653 aa14.23□□□□□ -0.13
CLDN11-208ENST00000488989 XKRYO14609 159 aa14.23□□□□□ -0.13
CLDN11-208ENST00000488989 ARHGEF9O43307 516 aa14.23□□□□□ -0.13
CLDN11-208ENST00000488989 AKAP8O43823 692 aaKnown RBP14.23□□□□□ -0.13
CLDN11-208ENST00000488989 TPOP07202 933 aa14.23□□□□□ -0.13
CLDN11-208ENST00000488989 SLC25A1P53007 311 aa14.23□□□□□ -0.13
CLDN11-208ENST00000488989 CLDN17P56750 224 aa14.23□□□□□ -0.13
CLDN11-208ENST00000488989 RUNX1T1Q06455 604 aa14.23□□□□□ -0.13
CLDN11-208ENST00000488989 C6orf141Q5SZD1 244 aa14.23□□□□□ -0.13
CLDN11-208ENST00000488989 EEF1A1P5Q5VTE0 462 aa14.23□□□□□ -0.13
CLDN11-208ENST00000488989 NXNL2Q5VZ03 156 aa14.23□□□□□ -0.13
CLDN11-208ENST00000488989 LEG1Q6P5S2 330 aa14.23□□□□□ -0.13
CLDN11-208ENST00000488989 UGT2A3Q6UWM9 527 aa14.23□□□□□ -0.13
CLDN11-208ENST00000488989 CXXC5Q7LFL8 322 aaKnown RBP14.23□□□□□ -0.13
CLDN11-208ENST00000488989 CD163Q86VB7 1156 aa14.23□□□□□ -0.13
CLDN11-208ENST00000488989 JAZF1Q86VZ6 243 aa14.23□□□□□ -0.13
CLDN11-208ENST00000488989 ST6GALNAC3Q8NDV1 305 aa14.23□□□□□ -0.13
CLDN11-208ENST00000488989 CNIH3Q8TBE1 160 aa14.23□□□□□ -0.13
CLDN11-208ENST00000488989 CPT1CQ8TCG5 803 aa14.23□□□□□ -0.13
CLDN11-208ENST00000488989 PTP4A1Q93096 173 aa14.23□□□□□ -0.13
CLDN11-208ENST00000488989 ZNF566Q969W8 418 aa14.23□□□□□ -0.13
CLDN11-208ENST00000488989 SLC25A44Q96H78 314 aaPredicted RBP14.23□□□□□ -0.13
CLDN11-208ENST00000488989 Q96MT0 163 aa14.23□□□□□ -0.13
CLDN11-208ENST00000488989 NMNAT3Q96T66 252 aa14.23□□□□□ -0.13
CLDN11-208ENST00000488989 ALG12Q9BV10 488 aa14.23□□□□□ -0.13
CLDN11-208ENST00000488989 EMC3Q9P0I2 261 aa14.23□□□□□ -0.13
CLDN11-208ENST00000488989 AASSQ9UDR5 926 aa14.23□□□□□ -0.13
CLDN11-208ENST00000488989 GPR52Q9Y2T5 361 aa14.23□□□□□ -0.13
CLDN11-208ENST00000488989 INTS1Q8N201 2190 aaKnown RBP14.23□□□□□ -0.13
CLDN11-208ENST00000488989 MBD3L4A6NDZ8 208 aaPredicted RBP14.22□□□□□ -0.13
CLDN11-208ENST00000488989 MBD3L3A6NE82 208 aaPredicted RBP14.22□□□□□ -0.13
CLDN11-208ENST00000488989 MBD3L5A6NJ08 208 aaPredicted RBP14.22□□□□□ -0.13
CLDN11-208ENST00000488989 PRR23D1E9PI22 279 aaPredicted RBP14.22□□□□□ -0.13
CLDN11-208ENST00000488989 M0R3G1 203 aa14.22□□□□□ -0.13
CLDN11-208ENST00000488989 RENP00797 406 aa14.22□□□□□ -0.13
CLDN11-208ENST00000488989 PGA4P0DJD7 388 aa14.22□□□□□ -0.13
CLDN11-208ENST00000488989 PGA3P0DJD8 388 aa14.22□□□□□ -0.13
CLDN11-208ENST00000488989 PRR23D2P0DMB1 279 aaPredicted RBP14.22□□□□□ -0.13
CLDN11-208ENST00000488989 ABOP16442 354 aa14.22□□□□□ -0.13
CLDN11-208ENST00000488989 PAICSP22234 425 aaKnown RBP14.22□□□□□ -0.13
CLDN11-208ENST00000488989 ACVR2AP27037 513 aa14.22□□□□□ -0.13
CLDN11-208ENST00000488989 NTF4P34130 210 aa14.22□□□□□ -0.13
CLDN11-208ENST00000488989 RBPJQ06330 500 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms