RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 VPS35Q96QK1 796 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 FOXC2Q99958 501 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 PLA2G12AQ9BZM1 189 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 CCSER1Q9C0I3 900 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 NARFLQ9H6Q4 476 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 SH2D2AQ9NP31 389 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 SPASTQ9UBP0 616 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 BTNL2Q9UIR0 455 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 NAP1L2Q9ULW6 460 aaPredicted RBP2.9□□□□□ -1.95
ITGB1-214ENST00000488427 MGAT4BQ9UQ53 548 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 IFT52Q9Y366 437 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 SEC16AO15027 2179 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 RNF222A6NCQ9 220 aa2.89□□□□□ -1.95
ITGB1-214ENST00000488427 HELTA6NFD8 242 aa2.89□□□□□ -1.95
ITGB1-214ENST00000488427 ZSCAN5BA6NJL1 495 aa2.89□□□□□ -1.95
ITGB1-214ENST00000488427 SHOX2O60902 331 aaPredicted RBP2.89□□□□□ -1.95
ITGB1-214ENST00000488427 CA11O75493 328 aa2.89□□□□□ -1.95
ITGB1-214ENST00000488427 HOXC4P09017 264 aaPredicted RBP2.89□□□□□ -1.95
ITGB1-214ENST00000488427 FUT3P21217 361 aa2.89□□□□□ -1.95
ITGB1-214ENST00000488427 GMFBP60983 142 aa2.89□□□□□ -1.95
ITGB1-214ENST00000488427 HSF2Q03933 536 aa2.89□□□□□ -1.95
ITGB1-214ENST00000488427 TLE4Q04727 773 aa2.89□□□□□ -1.95
ITGB1-214ENST00000488427 RIPPLY1Q0D2K3 151 aa2.89□□□□□ -1.95
ITGB1-214ENST00000488427 TWF1Q12792 350 aa2.89□□□□□ -1.95
ITGB1-214ENST00000488427 ART3Q13508 389 aa2.89□□□□□ -1.95
ITGB1-214ENST00000488427 SYPL1Q16563 259 aa2.89□□□□□ -1.95
ITGB1-214ENST00000488427 NDUFA9Q16795 377 aa2.89□□□□□ -1.95
ITGB1-214ENST00000488427 TIFABQ6ZNK6 161 aa2.89□□□□□ -1.95
ITGB1-214ENST00000488427 TMEM17Q86X19 198 aa2.89□□□□□ -1.95
ITGB1-214ENST00000488427 NRMQ8IXM6 262 aa2.89□□□□□ -1.95
ITGB1-214ENST00000488427 HAVCR1Q96D42 359 aa2.89□□□□□ -1.95
ITGB1-214ENST00000488427 SAMD8Q96LT4 415 aa2.89□□□□□ -1.95
ITGB1-214ENST00000488427 FAM111AQ96PZ2 611 aa2.89□□□□□ -1.95
ITGB1-214ENST00000488427 OR5B2Q96R09 309 aa2.89□□□□□ -1.95
ITGB1-214ENST00000488427 DUSP16Q9BY84 665 aa2.89□□□□□ -1.95
ITGB1-214ENST00000488427 ZNF385DQ9H6B1 395 aa2.89□□□□□ -1.95
ITGB1-214ENST00000488427 ECT2Q9H8V3 914 aa2.89□□□□□ -1.95
ITGB1-214ENST00000488427 MCCC2Q9HCC0 563 aa2.89□□□□□ -1.95
ITGB1-214ENST00000488427 ZDHHC4Q9NPG8 344 aa2.89□□□□□ -1.95
ITGB1-214ENST00000488427 AIPL1Q9NZN9 384 aa2.89□□□□□ -1.95
ITGB1-214ENST00000488427 LCMT1Q9UIC8 334 aa2.89□□□□□ -1.95
ITGB1-214ENST00000488427 PIN4Q9Y237 131 aaKnown RBP2.89□□□□□ -1.95
ITGB1-214ENST00000488427 MAB21L2Q9Y586 359 aa2.89□□□□□ -1.95
ITGB1-214ENST00000488427 CDH10Q9Y6N8 788 aa2.89□□□□□ -1.95
ITGB1-214ENST00000488427 SVEP1Q4LDE5 3571 aa2.89□□□□□ -1.95
ITGB1-214ENST00000488427 VWFP04275 2813 aa2.89□□□□□ -1.95
ITGB1-214ENST00000488427 TENM3Q9P273 2699 aa2.89□□□□□ -1.95
ITGB1-214ENST00000488427 BIRC6Q9NR09 4857 aa2.89□□□□□ -1.95
ITGB1-214ENST00000488427 ZBED9Q6R2W3 1325 aa2.89□□□□□ -1.95
ITGB1-214ENST00000488427 ZNF532Q9HCE3 1301 aa2.89□□□□□ -1.95
ITGB1-214ENST00000488427 IGHV1OR15-1A0A075B7D0 117 aa2.88□□□□□ -1.95
ITGB1-214ENST00000488427 MKRN2OSH3BPM6 223 aa2.88□□□□□ -1.95
ITGB1-214ENST00000488427 MAGEB4O15481 346 aaPredicted RBP2.88□□□□□ -1.95
ITGB1-214ENST00000488427 SEC22BO75396 215 aa2.88□□□□□ -1.95
ITGB1-214ENST00000488427 UGT2B17O75795 530 aa2.88□□□□□ -1.95
ITGB1-214ENST00000488427 IGKV3-11P04433 115 aa2.88□□□□□ -1.95
ITGB1-214ENST00000488427 OR8U8P0C7N1 319 aa2.88□□□□□ -1.95
ITGB1-214ENST00000488427 ZCCHC18P0CG32 403 aa2.88□□□□□ -1.95
ITGB1-214ENST00000488427 IGLL1P15814 213 aa2.88□□□□□ -1.95
ITGB1-214ENST00000488427 HPDP32754 393 aaPredicted RBP2.88□□□□□ -1.95
ITGB1-214ENST00000488427 IFNAR2P48551 515 aa2.88□□□□□ -1.95
ITGB1-214ENST00000488427 ARRB1P49407 418 aaPredicted RBP2.88□□□□□ -1.95
ITGB1-214ENST00000488427 MTTPP55157 894 aa2.88□□□□□ -1.95
ITGB1-214ENST00000488427 C21orf59P57076 290 aa2.88□□□□□ -1.95
ITGB1-214ENST00000488427 RPL10AP62906 217 aaKnown RBP2.88□□□□□ -1.95
ITGB1-214ENST00000488427 ARFRP1Q13795 201 aa2.88□□□□□ -1.95
ITGB1-214ENST00000488427 ATXN7L3Q14CW9 347 aaPredicted RBP2.88□□□□□ -1.95
ITGB1-214ENST00000488427 CDC37Q16543 378 aaPredicted RBP2.88□□□□□ -1.95
ITGB1-214ENST00000488427 LIPNQ5VXI9 398 aa2.88□□□□□ -1.95
ITGB1-214ENST00000488427 RAB12Q6IQ22 244 aa2.88□□□□□ -1.95
ITGB1-214ENST00000488427 FAHD2BQ6P2I3 314 aaPredicted RBP2.88□□□□□ -1.95
ITGB1-214ENST00000488427 APTXQ7Z2E3 356 aaKnown RBP2.88□□□□□ -1.95
ITGB1-214ENST00000488427 LCA5Q86VQ0 697 aa2.88□□□□□ -1.95
ITGB1-214ENST00000488427 ENTHD1Q8IYW4 607 aa2.88□□□□□ -1.95
ITGB1-214ENST00000488427 C15orf54Q8N8G6 183 aa2.88□□□□□ -1.95
ITGB1-214ENST00000488427 CCDC71LQ8N9Z2 235 aa2.88□□□□□ -1.95
ITGB1-214ENST00000488427 ZNF461Q8TAF7 563 aa2.88□□□□□ -1.95
ITGB1-214ENST00000488427 AENQ8WTP8 325 aaKnown RBP2.88□□□□□ -1.95
ITGB1-214ENST00000488427 FAHD2AQ96GK7 314 aa2.88□□□□□ -1.95
ITGB1-214ENST00000488427 AKR1E2Q96JD6 320 aa2.88□□□□□ -1.95
ITGB1-214ENST00000488427 TXN2Q99757 166 aa2.88□□□□□ -1.95
ITGB1-214ENST00000488427 GLIPR2Q9H4G4 154 aa2.88□□□□□ -1.95
ITGB1-214ENST00000488427 GPN2Q9H9Y4 310 aaPredicted RBP2.88□□□□□ -1.95
ITGB1-214ENST00000488427 PLGRKTQ9HBL7 147 aa2.88□□□□□ -1.95
ITGB1-214ENST00000488427 TM9SF3Q9HD45 589 aa2.88□□□□□ -1.95
ITGB1-214ENST00000488427 ZNF221Q9UK13 617 aa2.88□□□□□ -1.95
ITGB1-214ENST00000488427 FOXJ3Q9UPW0 622 aa2.88□□□□□ -1.95
ITGB1-214ENST00000488427 CHMP2BQ9UQN3 213 aa2.88□□□□□ -1.95
ITGB1-214ENST00000488427 ARL5CA6NH57 179 aa2.87□□□□□ -1.95
ITGB1-214ENST00000488427 K7EM74 188 aa2.87□□□□□ -1.95
ITGB1-214ENST00000488427 CLDN5O00501 218 aa2.87□□□□□ -1.95
ITGB1-214ENST00000488427 EFNA2O43921 213 aa2.87□□□□□ -1.95
ITGB1-214ENST00000488427 VPS26AO75436 327 aa2.87□□□□□ -1.95
ITGB1-214ENST00000488427 LALBAP00709 142 aa2.87□□□□□ -1.95
ITGB1-214ENST00000488427 TGFAP01135 160 aa2.87□□□□□ -1.95
ITGB1-214ENST00000488427 APODP05090 189 aa2.87□□□□□ -1.95
ITGB1-214ENST00000488427 UBTFL1P0CB47 393 aaPredicted RBP2.87□□□□□ -1.95
ITGB1-214ENST00000488427 CALB2P22676 271 aa2.87□□□□□ -1.95
ITGB1-214ENST00000488427 HTR1EP28566 365 aa2.87□□□□□ -1.95
ITGB1-214ENST00000488427 OPRD1P41143 372 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms