RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 THBS4P35443 961 aa16.74■□□□□ 0.27
CD55-209ENST00000488171 CAPZA2P47755 286 aa16.74■□□□□ 0.27
CD55-209ENST00000488171 ZNF74Q16587 644 aa16.74■□□□□ 0.27
CD55-209ENST00000488171 VMACQ2NL98 169 aa16.74■□□□□ 0.27
CD55-209ENST00000488171 TRMT5Q32P41 509 aaKnown RBP16.74■□□□□ 0.27
CD55-209ENST00000488171 NANOGP8Q6NSW7 305 aa16.74■□□□□ 0.27
CD55-209ENST00000488171 SLC46A3Q7Z3Q1 461 aa16.74■□□□□ 0.27
CD55-209ENST00000488171 VRK1Q99986 396 aaPredicted RBP16.74■□□□□ 0.27
CD55-209ENST00000488171 ZNF426Q9BUY5 554 aa16.74■□□□□ 0.27
CD55-209ENST00000488171 PCDHAC1Q9H158 963 aa16.74■□□□□ 0.27
CD55-209ENST00000488171 NANOGQ9H9S0 305 aa16.74■□□□□ 0.27
CD55-209ENST00000488171 B3GAT2Q9NPZ5 323 aa16.74■□□□□ 0.27
CD55-209ENST00000488171 SLC7A7Q9UM01 511 aa16.74■□□□□ 0.27
CD55-209ENST00000488171 TRAPPC13A5PLN9 417 aa16.73■□□□□ 0.27
CD55-209ENST00000488171 ZNF726A6NNF4 738 aa16.73■□□□□ 0.27
CD55-209ENST00000488171 C11orf98E9PRG8 122 aa16.73■□□□□ 0.27
CD55-209ENST00000488171 FXYD1O00168 92 aa16.73■□□□□ 0.27
CD55-209ENST00000488171 HLA-HP01893 362 aa16.73■□□□□ 0.27
CD55-209ENST00000488171 ADORA3P0DMS8 318 aa16.73■□□□□ 0.27
CD55-209ENST00000488171 USF1P22415 310 aaPredicted RBP16.73■□□□□ 0.27
CD55-209ENST00000488171 PPOXP50336 477 aa16.73■□□□□ 0.27
CD55-209ENST00000488171 PDLIM4P50479 330 aa16.73■□□□□ 0.27
CD55-209ENST00000488171 RABL3Q5HYI8 236 aa16.73■□□□□ 0.27
CD55-209ENST00000488171 INTS11Q5TA45 600 aaKnown RBP16.73■□□□□ 0.27
CD55-209ENST00000488171 ZNF813Q6ZN06 617 aa16.73■□□□□ 0.27
CD55-209ENST00000488171 CCDC80Q76M96 950 aa16.73■□□□□ 0.27
CD55-209ENST00000488171 ZNF75AQ96N20 296 aa16.73■□□□□ 0.27
CD55-209ENST00000488171 ULBP2Q9BZM5 246 aa16.73■□□□□ 0.27
CD55-209ENST00000488171 TAS2R5Q9NYW4 299 aa16.73■□□□□ 0.27
CD55-209ENST00000488171 ZNF224Q9NZL3 707 aa16.73■□□□□ 0.27
CD55-209ENST00000488171 FBN1P35555 2871 aaKnown RBP16.72■□□□□ 0.27
CD55-209ENST00000488171 CH25HO95992 272 aa16.72■□□□□ 0.27
CD55-209ENST00000488171 IFNGR1P15260 489 aa16.72■□□□□ 0.27
CD55-209ENST00000488171 NPR2P20594 1047 aa16.72■□□□□ 0.27
CD55-209ENST00000488171 BIDP55957 195 aa16.72■□□□□ 0.27
CD55-209ENST00000488171 CYLC2Q14093 348 aaPredicted RBP16.72■□□□□ 0.27
CD55-209ENST00000488171 TTC33Q6PID6 262 aaPredicted RBP16.72■□□□□ 0.27
CD55-209ENST00000488171 CALHM3Q86XJ0 350 aa16.72■□□□□ 0.27
CD55-209ENST00000488171 LRRC17Q8N6Y2 441 aa16.72■□□□□ 0.27
CD55-209ENST00000488171 IL17RDQ8NFM7 739 aa16.72■□□□□ 0.27
CD55-209ENST00000488171 OR6N1Q8NGY5 312 aa16.72■□□□□ 0.27
CD55-209ENST00000488171 SLC26A7Q8TE54 656 aa16.72■□□□□ 0.27
CD55-209ENST00000488171 MS4A3Q96HJ5 214 aa16.72■□□□□ 0.27
CD55-209ENST00000488171 PRSS27Q9BQR3 290 aa16.72■□□□□ 0.27
CD55-209ENST00000488171 POFUT2Q9Y2G5 429 aa16.72■□□□□ 0.27
CD55-209ENST00000488171 TMEM129A0AVI4 362 aa16.71■□□□□ 0.27
CD55-209ENST00000488171 hCG_2039718K7EN88 272 aa16.71■□□□□ 0.27
CD55-209ENST00000488171 NDUFS8O00217 210 aa16.71■□□□□ 0.27
CD55-209ENST00000488171 KPNA4O00629 521 aaPredicted RBP16.71■□□□□ 0.27
CD55-209ENST00000488171 IGHV4-31P0DP07 118 aa16.71■□□□□ 0.27
CD55-209ENST00000488171 CD79AP11912 226 aa16.71■□□□□ 0.27
CD55-209ENST00000488171 B4GALT1P15291 398 aa16.71■□□□□ 0.27
CD55-209ENST00000488171 ZNF14P17017 642 aaPredicted RBP16.71■□□□□ 0.27
CD55-209ENST00000488171 NR4A2P43354 598 aa16.71■□□□□ 0.27
CD55-209ENST00000488171 PIGFQ07326 219 aa16.71■□□□□ 0.27
CD55-209ENST00000488171 ZP4Q12836 540 aa16.71■□□□□ 0.27
CD55-209ENST00000488171 GSG1Q2KHT4 349 aa16.71■□□□□ 0.27
CD55-209ENST00000488171 TMEM54Q969K7 222 aa16.71■□□□□ 0.27
CD55-209ENST00000488171 LRRC58Q96CX6 371 aa16.71■□□□□ 0.27
CD55-209ENST00000488171 MPP4Q96JB8 637 aa16.71■□□□□ 0.27
CD55-209ENST00000488171 DOK1Q99704 481 aa16.71■□□□□ 0.27
CD55-209ENST00000488171 FOXB1Q99853 325 aa16.71■□□□□ 0.27
CD55-209ENST00000488171 NANSQ9NR45 359 aa16.71■□□□□ 0.27
CD55-209ENST00000488171 OR6A2O95222 327 aa16.7■□□□□ 0.26
CD55-209ENST00000488171 IGFBP1P08833 259 aaPredicted RBP16.7■□□□□ 0.26
CD55-209ENST00000488171 ASAH2BP0C7U1 165 aa16.7■□□□□ 0.26
CD55-209ENST00000488171 CSNK1A1P48729 337 aa16.7■□□□□ 0.26
CD55-209ENST00000488171 LSM11P83369 360 aaKnown RBP eCLIP16.7■□□□□ 0.26
CD55-209ENST00000488171 SNTB2Q13425 540 aaKnown RBP16.7■□□□□ 0.26
CD55-209ENST00000488171 DAG1Q14118 895 aa16.7■□□□□ 0.26
CD55-209ENST00000488171 CYB5R2Q6BCY4 276 aa16.7■□□□□ 0.26
CD55-209ENST00000488171 KRT80Q6KB66 452 aa16.7■□□□□ 0.26
CD55-209ENST00000488171 CGB2Q6NT52 195 aa16.7■□□□□ 0.26
CD55-209ENST00000488171 SLC35D2Q76EJ3 337 aa16.7■□□□□ 0.26
CD55-209ENST00000488171 SPATA21Q7Z572 469 aa16.7■□□□□ 0.26
CD55-209ENST00000488171 SVOPLQ8N434 492 aa16.7■□□□□ 0.26
CD55-209ENST00000488171 OR8J3Q8NGG0 315 aa16.7■□□□□ 0.26
CD55-209ENST00000488171 OR6X1Q8NH79 312 aa16.7■□□□□ 0.26
CD55-209ENST00000488171 RASSF5Q8WWW0 418 aa16.7■□□□□ 0.26
CD55-209ENST00000488171 FOXN4Q96NZ1 517 aa16.7■□□□□ 0.26
CD55-209ENST00000488171 PIMREGQ9BSJ6 248 aa16.7■□□□□ 0.26
CD55-209ENST00000488171 SLC19A3Q9BZV2 496 aa16.7■□□□□ 0.26
CD55-209ENST00000488171 MYOZ1Q9NP98 299 aaPredicted RBP16.7■□□□□ 0.26
CD55-209ENST00000488171 MEPEQ9NQ76 525 aaPredicted RBP16.7■□□□□ 0.26
CD55-209ENST00000488171 ZNF229Q9UJW7 825 aa16.7■□□□□ 0.26
CD55-209ENST00000488171 CUBNO60494 3623 aa16.7■□□□□ 0.26
CD55-209ENST00000488171 LOC390937A0A1W2PQ73 354 aa16.69■□□□□ 0.26
CD55-209ENST00000488171 ZNF35P13682 527 aa16.69■□□□□ 0.26
CD55-209ENST00000488171 ZNF16P17020 682 aaPredicted RBP16.69■□□□□ 0.26
CD55-209ENST00000488171 NR4A1P22736 598 aa16.69■□□□□ 0.26
CD55-209ENST00000488171 KLF10Q13118 480 aa16.69■□□□□ 0.26
CD55-209ENST00000488171 GGTLC2Q14390 218 aa16.69■□□□□ 0.26
CD55-209ENST00000488171 MSMPQ1L6U9 139 aa16.69■□□□□ 0.26
CD55-209ENST00000488171 CHRFAM7AQ494W8 412 aa16.69■□□□□ 0.26
CD55-209ENST00000488171 COQ5Q5HYK3 327 aa16.69■□□□□ 0.26
CD55-209ENST00000488171 REP15Q6BDI9 236 aa16.69■□□□□ 0.26
CD55-209ENST00000488171 CXXC5Q7LFL8 322 aaKnown RBP16.69■□□□□ 0.26
CD55-209ENST00000488171 SNX32Q86XE0 403 aa16.69■□□□□ 0.26
CD55-209ENST00000488171 ZCCHC24Q8N2G6 241 aaKnown RBP16.69■□□□□ 0.26
CD55-209ENST00000488171 SH3GL1Q99961 368 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms