RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 HIST1H2ABP04908 130 aa9.96□□□□□ -0.82
SPEN-205ENST00000487496 ASAH2BP0C7U1 165 aa9.96□□□□□ -0.82
SPEN-205ENST00000487496 CECR9P0C854 216 aa9.96□□□□□ -0.82
SPEN-205ENST00000487496 IFNGR1P15260 489 aa9.96□□□□□ -0.82
SPEN-205ENST00000487496 BIDP55957 195 aa9.96□□□□□ -0.82
SPEN-205ENST00000487496 SELENOWP63302 87 aa9.96□□□□□ -0.82
SPEN-205ENST00000487496 NAAAQ02083 359 aa9.96□□□□□ -0.82
SPEN-205ENST00000487496 LIPEQ05469 1076 aa9.96□□□□□ -0.82
SPEN-205ENST00000487496 MST1LQ2TV78 715 aa9.96□□□□□ -0.82
SPEN-205ENST00000487496 HIST3H2AQ7L7L0 130 aa9.96□□□□□ -0.82
SPEN-205ENST00000487496 SLC46A3Q7Z3Q1 461 aa9.96□□□□□ -0.82
SPEN-205ENST00000487496 SPATA21Q7Z572 469 aa9.96□□□□□ -0.82
SPEN-205ENST00000487496 OR6N1Q8NGY5 312 aa9.96□□□□□ -0.82
SPEN-205ENST00000487496 OR6X1Q8NH79 312 aa9.96□□□□□ -0.82
SPEN-205ENST00000487496 HIST1H2ACQ93077 130 aa9.96□□□□□ -0.82
SPEN-205ENST00000487496 TPD52L3Q96J77 140 aa9.96□□□□□ -0.82
SPEN-205ENST00000487496 ADAD1Q96M93 576 aaKnown RBP9.96□□□□□ -0.82
SPEN-205ENST00000487496 HOPXQ9BPY8 73 aaPredicted RBP9.96□□□□□ -0.82
SPEN-205ENST00000487496 KCNS3Q9BQ31 491 aa9.96□□□□□ -0.82
SPEN-205ENST00000487496 ELAC2Q9BQ52 826 aaKnown RBP9.96□□□□□ -0.82
SPEN-205ENST00000487496 SEC61A2Q9H9S3 476 aa9.96□□□□□ -0.82
SPEN-205ENST00000487496 EFCAB1Q9HAE3 211 aa9.96□□□□□ -0.82
SPEN-205ENST00000487496 B3GAT2Q9NPZ5 323 aa9.96□□□□□ -0.82
SPEN-205ENST00000487496 RNF223E7ERA6 249 aa9.95□□□□□ -0.82
SPEN-205ENST00000487496 H7C417 338 aa9.95□□□□□ -0.82
SPEN-205ENST00000487496 NME4O00746 187 aa9.95□□□□□ -0.82
SPEN-205ENST00000487496 RNF13O43567 381 aa9.95□□□□□ -0.82
SPEN-205ENST00000487496 SSX4O60224 188 aa9.95□□□□□ -0.82
SPEN-205ENST00000487496 CELA3BP08861 270 aa9.95□□□□□ -0.82
SPEN-205ENST00000487496 THRBP10828 461 aa9.95□□□□□ -0.82
SPEN-205ENST00000487496 UMPSP11172 480 aa9.95□□□□□ -0.82
SPEN-205ENST00000487496 BMP4P12644 408 aa9.95□□□□□ -0.82
SPEN-205ENST00000487496 FUT1P19526 365 aa9.95□□□□□ -0.82
SPEN-205ENST00000487496 CALCRP30988 508 aa9.95□□□□□ -0.82
SPEN-205ENST00000487496 ARR3P36575 388 aa9.95□□□□□ -0.82
SPEN-205ENST00000487496 RBM34P42696 430 aaKnown RBP9.95□□□□□ -0.82
SPEN-205ENST00000487496 CAPZA2P47755 286 aa9.95□□□□□ -0.82
SPEN-205ENST00000487496 CSNK1A1P48729 337 aa9.95□□□□□ -0.82
SPEN-205ENST00000487496 IDH3GP51553 393 aaPredicted RBP9.95□□□□□ -0.82
SPEN-205ENST00000487496 SLC7A2P52569 658 aa9.95□□□□□ -0.82
SPEN-205ENST00000487496 SEC24CP53992 1094 aa9.95□□□□□ -0.82
SPEN-205ENST00000487496 UGT2B15P54855 530 aa9.95□□□□□ -0.82
SPEN-205ENST00000487496 CHRNB3Q05901 458 aa9.95□□□□□ -0.82
SPEN-205ENST00000487496 RAB35Q15286 201 aa9.95□□□□□ -0.82
SPEN-205ENST00000487496 SWI5Q1ZZU3 235 aa9.95□□□□□ -0.82
SPEN-205ENST00000487496 C8orf82Q6P1X6 216 aaPredicted RBP9.95□□□□□ -0.82
SPEN-205ENST00000487496 SLC35D2Q76EJ3 337 aa9.95□□□□□ -0.82
SPEN-205ENST00000487496 ZNF627Q7L945 461 aa9.95□□□□□ -0.82
SPEN-205ENST00000487496 NANOGNBQ7Z5D8 188 aa9.95□□□□□ -0.82
SPEN-205ENST00000487496 MDP1Q86V88 176 aa9.95□□□□□ -0.82
SPEN-205ENST00000487496 MYPOPQ86VE0 399 aaPredicted RBP9.95□□□□□ -0.82
SPEN-205ENST00000487496 CCDC36Q8IYA8 594 aa9.95□□□□□ -0.82
SPEN-205ENST00000487496 PFN4Q8NHR9 129 aa9.95□□□□□ -0.82
SPEN-205ENST00000487496 TMEM255BQ8WV15 326 aa9.95□□□□□ -0.82
SPEN-205ENST00000487496 TMEM239Q8WW34 195 aa9.95□□□□□ -0.82
SPEN-205ENST00000487496 HTRA1Q92743 480 aa9.95□□□□□ -0.82
SPEN-205ENST00000487496 TMEM54Q969K7 222 aa9.95□□□□□ -0.82
SPEN-205ENST00000487496 ULBP2Q9BZM5 246 aa9.95□□□□□ -0.82
SPEN-205ENST00000487496 MYLK2Q9H1R3 596 aa9.95□□□□□ -0.82
SPEN-205ENST00000487496 CA10Q9NS85 328 aa9.95□□□□□ -0.82
SPEN-205ENST00000487496 B3GNT2Q9NY97 397 aa9.95□□□□□ -0.82
SPEN-205ENST00000487496 POFUT2Q9Y2G5 429 aa9.95□□□□□ -0.82
SPEN-205ENST00000487496 BLOC1S5-TXNDC5H3BN57 136 aa9.94□□□□□ -0.82
SPEN-205ENST00000487496 OR7A10O76100 309 aa9.94□□□□□ -0.82
SPEN-205ENST00000487496 IGF2P01344 180 aa9.94□□□□□ -0.82
SPEN-205ENST00000487496 HLA-HP01893 362 aa9.94□□□□□ -0.82
SPEN-205ENST00000487496 B4GALT1P15291 398 aa9.94□□□□□ -0.82
SPEN-205ENST00000487496 NUDT6P53370 316 aa9.94□□□□□ -0.82
SPEN-205ENST00000487496 HGFACQ04756 655 aa9.94□□□□□ -0.82
SPEN-205ENST00000487496 RPL18Q07020 188 aaKnown RBP9.94□□□□□ -0.82
SPEN-205ENST00000487496 NPRL3Q12980 569 aa9.94□□□□□ -0.82
SPEN-205ENST00000487496 MELKQ14680 651 aa9.94□□□□□ -0.82
SPEN-205ENST00000487496 KRTAP21-3Q3LHN1 58 aa9.94□□□□□ -0.82
SPEN-205ENST00000487496 LRFN4Q6PJG9 635 aa9.94□□□□□ -0.82
SPEN-205ENST00000487496 HACD2Q6Y1H2 254 aa9.94□□□□□ -0.82
SPEN-205ENST00000487496 ZNF813Q6ZN06 617 aa9.94□□□□□ -0.82
SPEN-205ENST00000487496 VTCN1Q7Z7D3 282 aa9.94□□□□□ -0.82
SPEN-205ENST00000487496 MAPK1IP1LQ8NDC0 245 aa9.94□□□□□ -0.82
SPEN-205ENST00000487496 OR4F15Q8NGB8 312 aa9.94□□□□□ -0.82
SPEN-205ENST00000487496 LIPHQ8WWY8 451 aa9.94□□□□□ -0.82
SPEN-205ENST00000487496 LZICQ8WZA0 190 aa9.94□□□□□ -0.82
SPEN-205ENST00000487496 FBXO17Q96EF6 278 aa9.94□□□□□ -0.82
SPEN-205ENST00000487496 SGTBQ96EQ0 304 aa9.94□□□□□ -0.82
SPEN-205ENST00000487496 SLC25A44Q96H78 314 aaPredicted RBP9.94□□□□□ -0.82
SPEN-205ENST00000487496 FOXB1Q99853 325 aa9.94□□□□□ -0.82
SPEN-205ENST00000487496 REG4Q9BYZ8 158 aa9.94□□□□□ -0.82
SPEN-205ENST00000487496 C20orf141Q9NUB4 165 aa9.94□□□□□ -0.82
SPEN-205ENST00000487496 GLTPQ9NZD2 209 aa9.94□□□□□ -0.82
SPEN-205ENST00000487496 A4GNTQ9UNA3 340 aa9.94□□□□□ -0.82
SPEN-205ENST00000487496 PMF1-BGLAPU3KQ54 211 aa9.94□□□□□ -0.82
SPEN-205ENST00000487496 FN1P02751 2386 aaKnown RBP9.93□□□□□ -0.82
SPEN-205ENST00000487496 IGHV2OR16-5A0A0B4J2B6 119 aa9.93□□□□□ -0.82
SPEN-205ENST00000487496 CXCR6O00574 342 aa9.93□□□□□ -0.82
SPEN-205ENST00000487496 BCL10O95999 233 aa9.93□□□□□ -0.82
SPEN-205ENST00000487496 F13BP05160 661 aa9.93□□□□□ -0.82
SPEN-205ENST00000487496 OR4A8P0C604 315 aa9.93□□□□□ -0.82
SPEN-205ENST00000487496 PGA4P0DJD7 388 aa9.93□□□□□ -0.82
SPEN-205ENST00000487496 PGA3P0DJD8 388 aa9.93□□□□□ -0.82
SPEN-205ENST00000487496 CD79AP11912 226 aa9.93□□□□□ -0.82
SPEN-205ENST00000487496 FUT4P22083 530 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms