RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 CD79AP11912 226 aa10.53□□□□□ -0.72
VPS16-208ENST00000487461 SRD5A1P18405 259 aa10.53□□□□□ -0.72
VPS16-208ENST00000487461 NR4A1P22736 598 aa10.53□□□□□ -0.72
VPS16-208ENST00000487461 GIFP27352 417 aa10.53□□□□□ -0.72
VPS16-208ENST00000487461 ATP4BP51164 291 aa10.53□□□□□ -0.72
VPS16-208ENST00000487461 NCALDP61601 193 aa10.53□□□□□ -0.72
VPS16-208ENST00000487461 POU3F1Q03052 451 aaPredicted RBP10.53□□□□□ -0.72
VPS16-208ENST00000487461 DUSP7Q16829 419 aa10.53□□□□□ -0.72
VPS16-208ENST00000487461 GSG1Q2KHT4 349 aa10.53□□□□□ -0.72
VPS16-208ENST00000487461 KRT80Q6KB66 452 aa10.53□□□□□ -0.72
VPS16-208ENST00000487461 LINC00114Q6XXX2 140 aa10.53□□□□□ -0.72
VPS16-208ENST00000487461 ZNF813Q6ZN06 617 aa10.53□□□□□ -0.72
VPS16-208ENST00000487461 ZNF627Q7L945 461 aa10.53□□□□□ -0.72
VPS16-208ENST00000487461 PTOV1Q86YD1 416 aa10.53□□□□□ -0.72
VPS16-208ENST00000487461 ARMC8Q8IUR7 673 aa10.53□□□□□ -0.72
VPS16-208ENST00000487461 C10orf53Q8N6V4 93 aa10.53□□□□□ -0.72
VPS16-208ENST00000487461 BHLHE22Q8NFJ8 381 aaPredicted RBP10.53□□□□□ -0.72
VPS16-208ENST00000487461 CKAP2Q8WWK9 683 aa10.53□□□□□ -0.72
VPS16-208ENST00000487461 MCHR1Q99705 422 aa10.53□□□□□ -0.72
VPS16-208ENST00000487461 CPPED1Q9BRF8 314 aaPredicted RBP10.53□□□□□ -0.72
VPS16-208ENST00000487461 TMEM43Q9BTV4 400 aa10.53□□□□□ -0.72
VPS16-208ENST00000487461 ASPNQ9BXN1 380 aa10.53□□□□□ -0.72
VPS16-208ENST00000487461 FAM53CQ9NYF3 392 aa10.53□□□□□ -0.72
VPS16-208ENST00000487461 ZNF224Q9NZL3 707 aa10.53□□□□□ -0.72
VPS16-208ENST00000487461 SLC13A4Q9UKG4 626 aa10.53□□□□□ -0.72
VPS16-208ENST00000487461 CORO2BQ9UQ03 480 aa10.53□□□□□ -0.72
VPS16-208ENST00000487461 POFUT2Q9Y2G5 429 aa10.53□□□□□ -0.72
VPS16-208ENST00000487461 CMAHPQ9Y471 501 aa10.53□□□□□ -0.72
VPS16-208ENST00000487461 NOX1Q9Y5S8 564 aa10.53□□□□□ -0.72
VPS16-208ENST00000487461 LYNX1G3V0Z9 82 aa10.52□□□□□ -0.73
VPS16-208ENST00000487461 M0R3H8 397 aa10.52□□□□□ -0.73
VPS16-208ENST00000487461 LILRA1O75019 489 aa10.52□□□□□ -0.73
VPS16-208ENST00000487461 LYPD3O95274 346 aa10.52□□□□□ -0.73
VPS16-208ENST00000487461 TACSTD2P09758 323 aa10.52□□□□□ -0.73
VPS16-208ENST00000487461 LYNX1P0DP58 116 aa10.52□□□□□ -0.73
VPS16-208ENST00000487461 ZNF35P13682 527 aa10.52□□□□□ -0.73
VPS16-208ENST00000487461 H2AFXP16104 143 aaPredicted RBP10.52□□□□□ -0.73
VPS16-208ENST00000487461 ZNF14P17017 642 aaPredicted RBP10.52□□□□□ -0.73
VPS16-208ENST00000487461 AHCYP23526 432 aa10.52□□□□□ -0.73
VPS16-208ENST00000487461 IL2RGP31785 369 aa10.52□□□□□ -0.73
VPS16-208ENST00000487461 PCBP3P57721 371 aaKnown RBP10.52□□□□□ -0.73
VPS16-208ENST00000487461 PUDPQ08623 228 aa10.52□□□□□ -0.73
VPS16-208ENST00000487461 SNTB2Q13425 540 aaKnown RBP10.52□□□□□ -0.73
VPS16-208ENST00000487461 RIN1Q13671 783 aa10.52□□□□□ -0.73
VPS16-208ENST00000487461 SQLEQ14534 574 aa10.52□□□□□ -0.73
VPS16-208ENST00000487461 NPTX1Q15818 432 aa10.52□□□□□ -0.73
VPS16-208ENST00000487461 PXKQ7Z7A4 578 aa10.52□□□□□ -0.73
VPS16-208ENST00000487461 RANBP3LQ86VV4 465 aaPredicted RBP10.52□□□□□ -0.73
VPS16-208ENST00000487461 ZNF786Q8N393 782 aa10.52□□□□□ -0.73
VPS16-208ENST00000487461 GPR32P1Q8NGA4 272 aa10.52□□□□□ -0.73
VPS16-208ENST00000487461 OR6N1Q8NGY5 312 aa10.52□□□□□ -0.73
VPS16-208ENST00000487461 FGFBP3Q8TAT2 258 aa10.52□□□□□ -0.73
VPS16-208ENST00000487461 UBASH3BQ8TF42 649 aa10.52□□□□□ -0.73
VPS16-208ENST00000487461 MRPL37Q9BZE1 423 aaKnown RBP10.52□□□□□ -0.73
VPS16-208ENST00000487461 B3GAT2Q9NPZ5 323 aa10.52□□□□□ -0.73
VPS16-208ENST00000487461 C11orf98E9PRG8 122 aa10.51□□□□□ -0.73
VPS16-208ENST00000487461 SERPINI2O75830 405 aa10.51□□□□□ -0.73
VPS16-208ENST00000487461 THY1P04216 161 aa10.51□□□□□ -0.73
VPS16-208ENST00000487461 ERCC1P07992 297 aaPredicted RBP10.51□□□□□ -0.73
VPS16-208ENST00000487461 PATE4P0C8F1 98 aa10.51□□□□□ -0.73
VPS16-208ENST00000487461 IFNGR1P15260 489 aa10.51□□□□□ -0.73
VPS16-208ENST00000487461 B4GALT1P15291 398 aa10.51□□□□□ -0.73
VPS16-208ENST00000487461 EVX1P49640 407 aa10.51□□□□□ -0.73
VPS16-208ENST00000487461 CHN2P52757 468 aa10.51□□□□□ -0.73
VPS16-208ENST00000487461 BIDP55957 195 aa10.51□□□□□ -0.73
VPS16-208ENST00000487461 RAB1AP62820 205 aa10.51□□□□□ -0.73
VPS16-208ENST00000487461 SELPLGQ14242 412 aa10.51□□□□□ -0.73
VPS16-208ENST00000487461 TRIP10Q15642 601 aa10.51□□□□□ -0.73
VPS16-208ENST00000487461 CR1LQ2VPA4 569 aa10.51□□□□□ -0.73
VPS16-208ENST00000487461 SWT1Q5T5J6 900 aaKnown RBP10.51□□□□□ -0.73
VPS16-208ENST00000487461 ZNF613Q6PF04 617 aa10.51□□□□□ -0.73
VPS16-208ENST00000487461 WDR88Q6ZMY6 472 aa10.51□□□□□ -0.73
VPS16-208ENST00000487461 RBM45Q8IUH3 476 aaKnown RBP10.51□□□□□ -0.73
VPS16-208ENST00000487461 OR4D11Q8NGI4 311 aa10.51□□□□□ -0.73
VPS16-208ENST00000487461 OR6T1Q8NGN1 323 aa10.51□□□□□ -0.73
VPS16-208ENST00000487461 OR5J2Q8NH18 312 aa10.51□□□□□ -0.73
VPS16-208ENST00000487461 TMEM54Q969K7 222 aa10.51□□□□□ -0.73
VPS16-208ENST00000487461 MRPL24Q96A35 216 aaKnown RBP10.51□□□□□ -0.73
VPS16-208ENST00000487461 ARHGDIGQ99819 225 aa10.51□□□□□ -0.73
VPS16-208ENST00000487461 FOXB1Q99853 325 aa10.51□□□□□ -0.73
VPS16-208ENST00000487461 ULBP2Q9BZM5 246 aa10.51□□□□□ -0.73
VPS16-208ENST00000487461 TPK1Q9H3S4 243 aa10.51□□□□□ -0.73
VPS16-208ENST00000487461 EVA1AQ9H8M9 152 aa10.51□□□□□ -0.73
VPS16-208ENST00000487461 DYNLRB1Q9NP97 96 aa10.51□□□□□ -0.73
VPS16-208ENST00000487461 TAS2R5Q9NYW4 299 aa10.51□□□□□ -0.73
VPS16-208ENST00000487461 REV1Q9UBZ9 1251 aa10.51□□□□□ -0.73
VPS16-208ENST00000487461 ANGPT4Q9Y264 503 aa10.51□□□□□ -0.73
VPS16-208ENST00000487461 CPSF4LA6NMK7 179 aaKnown RBP10.5□□□□□ -0.73
VPS16-208ENST00000487461 FMO6PO60774 539 aa10.5□□□□□ -0.73
VPS16-208ENST00000487461 CH25HO95992 272 aa10.5□□□□□ -0.73
VPS16-208ENST00000487461 MT-ATP6P00846 226 aa10.5□□□□□ -0.73
VPS16-208ENST00000487461 OPN1SWP03999 348 aa10.5□□□□□ -0.73
VPS16-208ENST00000487461 C8BP07358 591 aa10.5□□□□□ -0.73
VPS16-208ENST00000487461 ADORA3P0DMS8 318 aa10.5□□□□□ -0.73
VPS16-208ENST00000487461 HNF1AP20823 631 aa10.5□□□□□ -0.73
VPS16-208ENST00000487461 GLRXP35754 106 aa10.5□□□□□ -0.73
VPS16-208ENST00000487461 GIPRP48546 466 aa10.5□□□□□ -0.73
VPS16-208ENST00000487461 PTDSS1P48651 473 aaKnown RBP10.5□□□□□ -0.73
VPS16-208ENST00000487461 CSNK1A1P48729 337 aa10.5□□□□□ -0.73
VPS16-208ENST00000487461 SEC24CP53992 1094 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms