RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 TSPYL5Q86VY4 417 aaPredicted RBP16.57■□□□□ 0.24
CLIP2-206ENST00000487091 PRIMA1Q86XR5 153 aa16.57■□□□□ 0.24
CLIP2-206ENST00000487091 ZNF525Q8N782 197 aa16.57■□□□□ 0.24
CLIP2-206ENST00000487091 PCYOX1LQ8NBM8 494 aa16.57■□□□□ 0.24
CLIP2-206ENST00000487091 OR6N1Q8NGY5 312 aa16.57■□□□□ 0.24
CLIP2-206ENST00000487091 FAM168AQ92567 244 aa16.57■□□□□ 0.24
CLIP2-206ENST00000487091 HTRA1Q92743 480 aa16.57■□□□□ 0.24
CLIP2-206ENST00000487091 PROX1Q92786 737 aa16.57■□□□□ 0.24
CLIP2-206ENST00000487091 ULBP2Q9BZM5 246 aa16.57■□□□□ 0.24
CLIP2-206ENST00000487091 ZNF442Q9H7R0 627 aa16.57■□□□□ 0.24
CLIP2-206ENST00000487091 SEC61A2Q9H9S3 476 aa16.57■□□□□ 0.24
CLIP2-206ENST00000487091 NANSQ9NR45 359 aa16.57■□□□□ 0.24
CLIP2-206ENST00000487091 FBXO9Q9UK97 447 aaPredicted RBP16.57■□□□□ 0.24
CLIP2-206ENST00000487091 BAG5Q9UL15 447 aa16.57■□□□□ 0.24
CLIP2-206ENST00000487091 POFUT2Q9Y2G5 429 aa16.57■□□□□ 0.24
CLIP2-206ENST00000487091 YLPM1P49750 1951 aaKnown RBP16.57■□□□□ 0.24
CLIP2-206ENST00000487091 ZNF503-AS2A6NEH8 195 aa16.56■□□□□ 0.24
CLIP2-206ENST00000487091 VSTM5A8MXK1 200 aa16.56■□□□□ 0.24
CLIP2-206ENST00000487091 CH25HO95992 272 aa16.56■□□□□ 0.24
CLIP2-206ENST00000487091 IFNA14P01570 189 aa16.56■□□□□ 0.24
CLIP2-206ENST00000487091 CELA3BP08861 270 aa16.56■□□□□ 0.24
CLIP2-206ENST00000487091 OR4A8P0C604 315 aa16.56■□□□□ 0.24
CLIP2-206ENST00000487091 HGFACQ04756 655 aa16.56■□□□□ 0.24
CLIP2-206ENST00000487091 LOXL1Q08397 574 aaPredicted RBP16.56■□□□□ 0.24
CLIP2-206ENST00000487091 MDP1Q86V88 176 aa16.56■□□□□ 0.24
CLIP2-206ENST00000487091 WDFY1Q8IWB7 410 aa16.56■□□□□ 0.24
CLIP2-206ENST00000487091 OR6X1Q8NH79 312 aa16.56■□□□□ 0.24
CLIP2-206ENST00000487091 C10orf105Q8TEF2 133 aa16.56■□□□□ 0.24
CLIP2-206ENST00000487091 ZNF583Q96ND8 569 aa16.56■□□□□ 0.24
CLIP2-206ENST00000487091 PLK3Q9H4B4 646 aa16.56■□□□□ 0.24
CLIP2-206ENST00000487091 CCDC134Q9H6E4 229 aa16.56■□□□□ 0.24
CLIP2-206ENST00000487091 ZNF446Q9NWS9 450 aa16.56■□□□□ 0.24
CLIP2-206ENST00000487091 GID8Q9NWU2 228 aa16.56■□□□□ 0.24
CLIP2-206ENST00000487091 B3GNT2Q9NY97 397 aa16.56■□□□□ 0.24
CLIP2-206ENST00000487091 TAS2R5Q9NYW4 299 aa16.56■□□□□ 0.24
CLIP2-206ENST00000487091 ZNF229Q9UJW7 825 aa16.56■□□□□ 0.24
CLIP2-206ENST00000487091 FKBP7Q9Y680 259 aa16.56■□□□□ 0.24
CLIP2-206ENST00000487091 LOC100653049A0A140TA62 436 aa16.55■□□□□ 0.24
CLIP2-206ENST00000487091 C11orf98E9PRG8 122 aa16.55■□□□□ 0.24
CLIP2-206ENST00000487091 KRT34O76011 436 aa16.55■□□□□ 0.24
CLIP2-206ENST00000487091 HIST1H2ABP04908 130 aa16.55■□□□□ 0.24
CLIP2-206ENST00000487091 ASAH2BP0C7U1 165 aa16.55■□□□□ 0.24
CLIP2-206ENST00000487091 IFNGR1P15260 489 aa16.55■□□□□ 0.24
CLIP2-206ENST00000487091 CAPZA2P47755 286 aa16.55■□□□□ 0.24
CLIP2-206ENST00000487091 CSNK1A1P48729 337 aa16.55■□□□□ 0.24
CLIP2-206ENST00000487091 BIDP55957 195 aa16.55■□□□□ 0.24
CLIP2-206ENST00000487091 ZNF813Q6ZN06 617 aa16.55■□□□□ 0.24
CLIP2-206ENST00000487091 SLC35D2Q76EJ3 337 aa16.55■□□□□ 0.24
CLIP2-206ENST00000487091 HIST3H2AQ7L7L0 130 aa16.55■□□□□ 0.24
CLIP2-206ENST00000487091 MYPOPQ86VE0 399 aaPredicted RBP16.55■□□□□ 0.24
CLIP2-206ENST00000487091 CARM1Q86X55 608 aa16.55■□□□□ 0.24
CLIP2-206ENST00000487091 C10orf82Q8WW14 230 aa16.55■□□□□ 0.24
CLIP2-206ENST00000487091 HIST1H2ACQ93077 130 aa16.55■□□□□ 0.24
CLIP2-206ENST00000487091 TNFRSF13CQ96RJ3 184 aa16.55■□□□□ 0.24
CLIP2-206ENST00000487091 FOXB1Q99853 325 aa16.55■□□□□ 0.24
CLIP2-206ENST00000487091 PRSS27Q9BQR3 290 aa16.55■□□□□ 0.24
CLIP2-206ENST00000487091 POLR2J2Q9GZM3 115 aaKnown RBP16.55■□□□□ 0.24
CLIP2-206ENST00000487091 POLR2J3Q9H1A7 115 aaKnown RBP16.55■□□□□ 0.24
CLIP2-206ENST00000487091 DENND2DQ9H6A0 471 aaPredicted RBP16.55■□□□□ 0.24
CLIP2-206ENST00000487091 SH3GLB1Q9Y371 365 aa16.55■□□□□ 0.24
CLIP2-206ENST00000487091 IGHV2OR16-5A0A0B4J2B6 119 aa16.54■□□□□ 0.24
CLIP2-206ENST00000487091 SLC22A2O15244 555 aa16.54■□□□□ 0.24
CLIP2-206ENST00000487091 SERPINI2O75830 405 aa16.54■□□□□ 0.24
CLIP2-206ENST00000487091 SEC14L2O76054 403 aa16.54■□□□□ 0.24
CLIP2-206ENST00000487091 IGF2P01344 180 aa16.54■□□□□ 0.24
CLIP2-206ENST00000487091 HLA-HP01893 362 aa16.54■□□□□ 0.24
CLIP2-206ENST00000487091 NPRL3Q12980 569 aa16.54■□□□□ 0.24
CLIP2-206ENST00000487091 GSG1Q2KHT4 349 aa16.54■□□□□ 0.24
CLIP2-206ENST00000487091 VHLLQ6RSH7 139 aa16.54■□□□□ 0.24
CLIP2-206ENST00000487091 LRRC17Q8N6Y2 441 aa16.54■□□□□ 0.24
CLIP2-206ENST00000487091 NANOS1Q8WY41 292 aaKnown RBP16.54■□□□□ 0.24
CLIP2-206ENST00000487091 TMEM54Q969K7 222 aa16.54■□□□□ 0.24
CLIP2-206ENST00000487091 ZNF75AQ96N20 296 aa16.54■□□□□ 0.24
CLIP2-206ENST00000487091 SORCS2Q96PQ0 1159 aa16.54■□□□□ 0.24
CLIP2-206ENST00000487091 MEPEQ9NQ76 525 aaPredicted RBP16.54■□□□□ 0.24
CLIP2-206ENST00000487091 GLTPQ9NZD2 209 aa16.54■□□□□ 0.24
CLIP2-206ENST00000487091 CAPN7Q9Y6W3 813 aa16.54■□□□□ 0.24
CLIP2-206ENST00000487091 KPNA4O00629 521 aaPredicted RBP16.53■□□□□ 0.24
CLIP2-206ENST00000487091 RNF13O43567 381 aa16.53■□□□□ 0.24
CLIP2-206ENST00000487091 GPRIN2O60269 458 aa16.53■□□□□ 0.24
CLIP2-206ENST00000487091 OR5F1O95221 314 aa16.53■□□□□ 0.24
CLIP2-206ENST00000487091 CD79AP11912 226 aa16.53■□□□□ 0.24
CLIP2-206ENST00000487091 NPR2P20594 1047 aa16.53■□□□□ 0.24
CLIP2-206ENST00000487091 THBS4P35443 961 aa16.53■□□□□ 0.24
CLIP2-206ENST00000487091 RBM34P42696 430 aaKnown RBP16.53■□□□□ 0.24
CLIP2-206ENST00000487091 PPOXP50336 477 aa16.53■□□□□ 0.24
CLIP2-206ENST00000487091 PDLIM4P50479 330 aa16.53■□□□□ 0.24
CLIP2-206ENST00000487091 SF3A3Q12874 501 aaKnown RBP eCLIP16.53■□□□□ 0.24
CLIP2-206ENST00000487091 TMEM249Q2WGJ8 235 aa16.53■□□□□ 0.24
CLIP2-206ENST00000487091 SLC46A3Q7Z3Q1 461 aa16.53■□□□□ 0.24
CLIP2-206ENST00000487091 PIWIL3Q7Z3Z3 882 aaKnown RBP16.53■□□□□ 0.24
CLIP2-206ENST00000487091 SLC25A44Q96H78 314 aaPredicted RBP16.53■□□□□ 0.24
CLIP2-206ENST00000487091 MYOZ1Q9NP98 299 aaPredicted RBP16.53■□□□□ 0.24
CLIP2-206ENST00000487091 YAE1D1Q9NRH1 226 aa16.53■□□□□ 0.24
CLIP2-206ENST00000487091 RIMS3Q9UJD0 308 aa16.53■□□□□ 0.24
CLIP2-206ENST00000487091 AP3M1Q9Y2T2 418 aa16.53■□□□□ 0.24
CLIP2-206ENST00000487091 FAM220BPB1ANY3 271 aa16.52■□□□□ 0.24
CLIP2-206ENST00000487091 NDUFS8O00217 210 aa16.52■□□□□ 0.24
CLIP2-206ENST00000487091 ENTPD5O75356 428 aa16.52■□□□□ 0.24
CLIP2-206ENST00000487091 LY6HO94772 140 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms