RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 DHRS4L2Q6PKH6 230 aa15.17■□□□□ 0.02
COL7A1-210ENST00000487017 Q6ZTK2 550 aa15.17■□□□□ 0.02
COL7A1-210ENST00000487017 OR51D1Q8NGF3 324 aa15.17■□□□□ 0.02
COL7A1-210ENST00000487017 HIF1ANQ9NWT6 349 aa15.17■□□□□ 0.02
COL7A1-210ENST00000487017 NME7Q9Y5B8 376 aa15.17■□□□□ 0.02
COL7A1-210ENST00000487017 RFXAPO00287 272 aa15.17■□□□□ 0.02
COL7A1-210ENST00000487017 PDGFAP04085 211 aa15.17■□□□□ 0.02
COL7A1-210ENST00000487017 FOSL1P15407 271 aa15.17■□□□□ 0.02
COL7A1-210ENST00000487017 TMEM176BQ3YBM2 270 aaPredicted RBP15.17■□□□□ 0.02
COL7A1-210ENST00000487017 SOWAHCQ53LP3 525 aaPredicted RBP15.17■□□□□ 0.02
COL7A1-210ENST00000487017 RLN3Q8WXF3 142 aa15.17■□□□□ 0.02
COL7A1-210ENST00000487017 RBPMSQ93062 196 aaKnown RBP15.17■□□□□ 0.02
COL7A1-210ENST00000487017 TEAD3Q99594 435 aa15.17■□□□□ 0.02
COL7A1-210ENST00000487017 FAM212BQ9NTI7 297 aaPredicted RBP15.17■□□□□ 0.02
COL7A1-210ENST00000487017 ITGB4P16144 1822 aa15.17■□□□□ 0.02
COL7A1-210ENST00000487017 P2RY10O00398 339 aa15.16■□□□□ 0.02
COL7A1-210ENST00000487017 C1QBP02746 253 aa15.16■□□□□ 0.02
COL7A1-210ENST00000487017 MTCP1P56278 107 aa15.16■□□□□ 0.02
COL7A1-210ENST00000487017 ARG2P78540 354 aa15.16■□□□□ 0.02
COL7A1-210ENST00000487017 ZNF385BQ569K4 471 aa15.16■□□□□ 0.02
COL7A1-210ENST00000487017 FBXW12Q6X9E4 464 aa15.16■□□□□ 0.02
COL7A1-210ENST00000487017 ADGRE4PQ86SQ3 457 aa15.16■□□□□ 0.02
COL7A1-210ENST00000487017 KLHDC8BQ8IXV7 354 aa15.16■□□□□ 0.02
COL7A1-210ENST00000487017 OR5L1Q8NGL2 311 aa15.16■□□□□ 0.02
COL7A1-210ENST00000487017 DVL3Q92997 716 aaPredicted RBP15.16■□□□□ 0.02
COL7A1-210ENST00000487017 SEC22CQ9BRL7 303 aa15.16■□□□□ 0.02
COL7A1-210ENST00000487017 SEMA6CQ9H3T2 930 aa15.16■□□□□ 0.02
COL7A1-210ENST00000487017 KIR3DX1Q9H7L2 352 aa15.16■□□□□ 0.02
COL7A1-210ENST00000487017 GPATCH2Q9NW75 528 aa15.16■□□□□ 0.02
COL7A1-210ENST00000487017 MUTYHQ9UIF7 546 aa15.16■□□□□ 0.02
COL7A1-210ENST00000487017 IGLV3-27P01718 113 aa15.16■□□□□ 0.02
COL7A1-210ENST00000487017 ITGB2P05107 769 aa15.16■□□□□ 0.02
COL7A1-210ENST00000487017 ELK1P19419 428 aa15.16■□□□□ 0.02
COL7A1-210ENST00000487017 GDPD3Q7L5L3 318 aa15.16■□□□□ 0.02
COL7A1-210ENST00000487017 RTN4RL1Q86UN2 441 aaPredicted RBP15.16■□□□□ 0.02
COL7A1-210ENST00000487017 PPP1R3BQ86XI6 285 aa15.16■□□□□ 0.02
COL7A1-210ENST00000487017 IKZF5Q9H5V7 419 aa15.16■□□□□ 0.02
COL7A1-210ENST00000487017 LTB4R2Q9NPC1 389 aa15.16■□□□□ 0.02
COL7A1-210ENST00000487017 CTNSO60931 367 aa15.16■□□□□ 0.02
COL7A1-210ENST00000487017 ZNF780AO75290 641 aaPredicted RBP15.16■□□□□ 0.02
COL7A1-210ENST00000487017 CLDN17P56750 224 aa15.16■□□□□ 0.02
COL7A1-210ENST00000487017 MANEAQ5SRI9 462 aa15.16■□□□□ 0.02
COL7A1-210ENST00000487017 C9orf135Q5VTT2 229 aa15.16■□□□□ 0.02
COL7A1-210ENST00000487017 OR6M1Q8NGM8 313 aa15.16■□□□□ 0.02
COL7A1-210ENST00000487017 M0QYG6 137 aa15.16■□□□□ 0.02
COL7A1-210ENST00000487017 KCNK2O95069 426 aa15.16■□□□□ 0.02
COL7A1-210ENST00000487017 NKAIN3Q8N8D7 197 aa15.16■□□□□ 0.02
COL7A1-210ENST00000487017 MS4A6EQ96DS6 147 aa15.16■□□□□ 0.02
COL7A1-210ENST00000487017 YIPF6Q96EC8 236 aa15.16■□□□□ 0.02
COL7A1-210ENST00000487017 ZNF223Q9UK11 482 aaPredicted RBP15.16■□□□□ 0.02
COL7A1-210ENST00000487017 PHIPQ8WWQ0 1821 aa15.16■□□□□ 0.02
COL7A1-210ENST00000487017 TARM1B6A8C7 271 aa15.16■□□□□ 0.02
COL7A1-210ENST00000487017 TRHRP34981 398 aaPredicted RBP15.16■□□□□ 0.02
COL7A1-210ENST00000487017 ZDHHC5Q9C0B5 715 aa15.16■□□□□ 0.02
COL7A1-210ENST00000487017 SELENOIQ9C0D9 397 aa15.16■□□□□ 0.02
COL7A1-210ENST00000487017 LYRM4Q9HD34 91 aa15.16■□□□□ 0.02
COL7A1-210ENST00000487017 A0A087WUU8 490 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 HTR5AP47898 357 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 RAB5CP51148 216 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 ACSM1Q08AH1 577 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 DUSP5Q16690 384 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 RHBDD1Q8TEB9 315 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 RNF141Q8WVD5 230 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 ATP13A2Q9NQ11 1180 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 TMEM30AQ9NV96 361 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 GPR55Q9Y2T6 319 aaPredicted RBP15.15■□□□□ 0.02
COL7A1-210ENST00000487017 C2orf72A6NCS6 295 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 FXYD1O00168 92 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 LALBAP00709 142 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 IGFBP1P08833 259 aaPredicted RBP15.15■□□□□ 0.02
COL7A1-210ENST00000487017 CD63P08962 238 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 SBK2P0C263 348 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 MSR1P21757 451 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 NPSR1Q6W5P4 371 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 PRSS45Q7RTY3 260 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 LINC01599Q8WXQ3 324 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 ELF4Q99607 663 aaPredicted RBP15.15■□□□□ 0.02
COL7A1-210ENST00000487017 SLC25A21Q9BQT8 299 aaPredicted RBP15.15■□□□□ 0.02
COL7A1-210ENST00000487017 QPCTLQ9NXS2 382 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 SULT1C4O75897 302 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 BIDP55957 195 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 EBPQ15125 230 aaKnown RBP15.15■□□□□ 0.02
COL7A1-210ENST00000487017 GLYATL3Q5SZD4 288 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 ACSM5Q6NUN0 579 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 SLC16A14Q7RTX9 510 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 LINC00346Q8IVM7 164 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 CNEP1R1Q8N9A8 125 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 WASH6PQ9NQA3 447 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 MMACHCQ9Y4U1 282 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 CORINQ9Y5Q5 1042 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 WIF1Q9Y5W5 379 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 M6PRP20645 277 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 IGFBP6P24592 240 aaPredicted RBP15.15■□□□□ 0.02
COL7A1-210ENST00000487017 BLVRBP30043 206 aaPredicted RBP15.15■□□□□ 0.02
COL7A1-210ENST00000487017 PPT1P50897 306 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 EPHA5P54756 1037 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 HMGN3Q15651 99 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 SLC36A2Q495M3 483 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 OR52W1Q6IF63 320 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 HEPHL1Q6MZM0 1159 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms