RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 OR4E2Q8NGC2 313 aa3.19□□□□□ -1.9
SMARCC1-207ENST00000485833 OR4F5Q8NH21 305 aa3.19□□□□□ -1.9
SMARCC1-207ENST00000485833 GOT1L1Q8NHS2 421 aaPredicted RBP3.19□□□□□ -1.9
SMARCC1-207ENST00000485833 FAM57AQ8TBR7 257 aa3.19□□□□□ -1.9
SMARCC1-207ENST00000485833 VN1R17PQ8TDU5 208 aa3.19□□□□□ -1.9
SMARCC1-207ENST00000485833 FAM172AQ8WUF8 416 aa3.19□□□□□ -1.9
SMARCC1-207ENST00000485833 PSKH2Q96QS6 385 aa3.19□□□□□ -1.9
SMARCC1-207ENST00000485833 PEBP4Q96S96 227 aa3.19□□□□□ -1.9
SMARCC1-207ENST00000485833 MAPKAP1Q9BPZ7 522 aa3.19□□□□□ -1.9
SMARCC1-207ENST00000485833 TIMM29Q9BSF4 260 aa3.19□□□□□ -1.9
SMARCC1-207ENST00000485833 WWP1Q9H0M0 922 aa3.19□□□□□ -1.9
SMARCC1-207ENST00000485833 FAM212BQ9NTI7 297 aaPredicted RBP3.19□□□□□ -1.9
SMARCC1-207ENST00000485833 ETNK2Q9NVF9 386 aa3.19□□□□□ -1.9
SMARCC1-207ENST00000485833 EIF3KQ9UBQ5 218 aaKnown RBP3.19□□□□□ -1.9
SMARCC1-207ENST00000485833 MLXQ9UH92 298 aa3.19□□□□□ -1.9
SMARCC1-207ENST00000485833 GNPTGQ9UJJ9 305 aa3.19□□□□□ -1.9
SMARCC1-207ENST00000485833 FAM215AQ9Y5M1 114 aa3.19□□□□□ -1.9
SMARCC1-207ENST00000485833 YLPM1P49750 1951 aaKnown RBP3.19□□□□□ -1.9
SMARCC1-207ENST00000485833 FREM1Q5H8C1 2179 aa3.19□□□□□ -1.9
SMARCC1-207ENST00000485833 A0A0J9YYE9 177 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 C1orf232A0A0U1RR37 186 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 A0A1B0GVL5 298 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 GSAPA4D1B5 854 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 SDR42E2A6NKP2 422 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 VSTM2BA6NLU5 285 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 CETN3O15182 167 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 MED7O43513 233 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 STX10O60499 249 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 SLC25A14O95258 325 aaPredicted RBP3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 TSPAN12O95859 305 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 TRBC1P01850 177 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 TPBGLP0DKB5 382 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 EZRP15311 586 aaKnown RBP3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 HLA-DPA1P20036 260 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 SYT1P21579 422 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 GDF1P27539 372 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 PRDX3P30048 256 aaKnown RBP3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 PEBP1P30086 187 aaKnown RBP3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 CDH5P33151 784 aaPredicted RBP3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 HLCSP50747 726 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 SLC25A1P53007 311 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 STX17P56962 302 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 CXCL6P80162 114 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 OGDHQ02218 1023 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 SLC34A1Q06495 639 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 ZNF33BQ06732 778 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 PPP1R3AQ16821 1122 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 ODF2Q5BJF6 829 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 TFDP3Q5H9I0 405 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 LRRC38Q5VT99 294 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 WASH2PQ6VEQ5 465 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 Q6ZRG5 221 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 TRAPPC5Q8IUR0 188 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 LPCAT1Q8NF37 534 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 LINC01560Q8TB33 94 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 GLYATL1Q969I3 302 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 C12orf66Q96MD2 445 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 S1PR3Q99500 378 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 CITED2Q99967 270 aaPredicted RBP3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 THUMPD3Q9BV44 507 aaKnown RBP3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 SLC7A5P2Q9GIP4 190 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 ASB8Q9H765 288 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 KIR3DX1Q9H7L2 352 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 MAGEF1Q9HAY2 307 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 IL1RL2Q9HB29 575 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 FANCEQ9HB96 536 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 PNPLA3Q9NST1 481 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 ARMCX3Q9UH62 379 aaPredicted RBP3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 PPIL1Q9Y3C6 166 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 ALPK2Q86TB3 2170 aa3.18□□□□□ -1.9
SMARCC1-207ENST00000485833 FREM3P0C091 2139 aa3.17□□□□□ -1.9
SMARCC1-207ENST00000485833 IGHV3OR16-12A0A075B7B8 117 aa3.17□□□□□ -1.9
SMARCC1-207ENST00000485833 IGHV1-45A0A0A0MS14 117 aa3.17□□□□□ -1.9
SMARCC1-207ENST00000485833 A0A0G2JMM0 328 aa3.17□□□□□ -1.9
SMARCC1-207ENST00000485833 A0A1W2PPB8 328 aa3.17□□□□□ -1.9
SMARCC1-207ENST00000485833 A0A1W2PRQ8 180 aa3.17□□□□□ -1.9
SMARCC1-207ENST00000485833 A0A1W2PRS3 328 aa3.17□□□□□ -1.9
SMARCC1-207ENST00000485833 PINLYPA6NC86 204 aa3.17□□□□□ -1.9
SMARCC1-207ENST00000485833 OR2AG2A6NM03 316 aa3.17□□□□□ -1.9
SMARCC1-207ENST00000485833 KIR3DP1A8MWS1 328 aa3.17□□□□□ -1.9
SMARCC1-207ENST00000485833 KMOO15229 486 aa3.17□□□□□ -1.9
SMARCC1-207ENST00000485833 CDC40O60508 579 aaKnown RBP eCLIP3.17□□□□□ -1.9
SMARCC1-207ENST00000485833 KLHL41O60662 606 aa3.17□□□□□ -1.9
SMARCC1-207ENST00000485833 GLCEO94923 617 aa3.17□□□□□ -1.9
SMARCC1-207ENST00000485833 HSPA4LO95757 839 aa3.17□□□□□ -1.9
SMARCC1-207ENST00000485833 SERPINA7P05543 415 aa3.17□□□□□ -1.9
SMARCC1-207ENST00000485833 C8orf89P0DMQ9 161 aa3.17□□□□□ -1.9
SMARCC1-207ENST00000485833 PGAM2P15259 253 aa3.17□□□□□ -1.9
SMARCC1-207ENST00000485833 UGT2B7P16662 529 aa3.17□□□□□ -1.9
SMARCC1-207ENST00000485833 IDSP22304 550 aa3.17□□□□□ -1.9
SMARCC1-207ENST00000485833 MAGEB1P43366 347 aa3.17□□□□□ -1.9
SMARCC1-207ENST00000485833 MTIF2P46199 727 aaKnown RBP3.17□□□□□ -1.9
SMARCC1-207ENST00000485833 PAX2Q02962 417 aa3.17□□□□□ -1.9
SMARCC1-207ENST00000485833 DMTNQ08495 405 aa3.17□□□□□ -1.9
SMARCC1-207ENST00000485833 XRCC4Q13426 336 aa3.17□□□□□ -1.9
SMARCC1-207ENST00000485833 OR1C1Q15619 314 aa3.17□□□□□ -1.9
SMARCC1-207ENST00000485833 UNC50Q53HI1 259 aa3.17□□□□□ -1.9
SMARCC1-207ENST00000485833 CMPK2Q5EBM0 449 aa3.17□□□□□ -1.9
SMARCC1-207ENST00000485833 SCYL2Q6P3W7 929 aa3.17□□□□□ -1.9
SMARCC1-207ENST00000485833 LANCL3Q6ZV70 420 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms