RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 GPR139Q6DWJ6 353 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 C1orf94Q6P1W5 598 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 TBPL2Q6SJ96 375 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 KLHL24Q6TFL4 600 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 MEX3BQ6ZN04 569 aaKnown RBP7.32□□□□□ -1.24
SF3A1-208ENST00000485618 SLC46A3Q7Z3Q1 461 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 ZDHHC13Q8IUH4 622 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 EPHX4Q8IUS5 362 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 KDM8Q8N371 416 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 SVOPLQ8N434 492 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 LRRC17Q8N6Y2 441 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 ZIC4Q8N9L1 334 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 ATG16L2Q8NAA4 619 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 RELL2Q8NC24 303 aaPredicted RBP7.32□□□□□ -1.24
SF3A1-208ENST00000485618 C1orf162Q8NEQ5 155 aaPredicted RBP7.32□□□□□ -1.24
SF3A1-208ENST00000485618 CENPNQ96H22 339 aaPredicted RBP7.32□□□□□ -1.24
SF3A1-208ENST00000485618 FAM46AQ96IP4 442 aaKnown RBP7.32□□□□□ -1.24
SF3A1-208ENST00000485618 TNFRSF13CQ96RJ3 184 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 MED18Q9BUE0 208 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 TXNIPQ9H3M7 391 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 GALNT8Q9NY28 637 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 TAS2R16Q9NYV7 291 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 TAS2R5Q9NYW4 299 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 KIF17Q9P2E2 1029 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 MALT1Q9UDY8 824 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 ING1Q9UK53 422 aaPredicted RBP7.32□□□□□ -1.24
SF3A1-208ENST00000485618 POFUT2Q9Y2G5 429 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 ORC6Q9Y5N6 252 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 MAGED1Q9Y5V3 778 aaPredicted RBP7.32□□□□□ -1.24
SF3A1-208ENST00000485618 U3KQV3 271 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 CRYBG3Q68DQ2 2970 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 CSMD1Q96PZ7 3565 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 CELSR2Q9HCU4 2923 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 CACNA1CQ13936 2221 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 SLC35F4A4IF30 521 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 ZNF814B7Z6K7 855 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 LRRN3E7EW58 273 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 G3V2T6 193 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 TRAF3IP2O43734 574 aaPredicted RBP7.31□□□□□ -1.24
SF3A1-208ENST00000485618 WNT11O96014 354 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 CD14P08571 375 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 EPXP11678 715 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 APEHP13798 732 aaKnown RBP7.31□□□□□ -1.24
SF3A1-208ENST00000485618 MAKP20794 623 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 PTNP21246 168 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 CSNK1A1P48729 337 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 ZNF84P51523 738 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 CTXN1P60606 82 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 UBE2NP61088 152 aaKnown RBP7.31□□□□□ -1.24
SF3A1-208ENST00000485618 RPL27P61353 136 aaKnown RBP7.31□□□□□ -1.24
SF3A1-208ENST00000485618 RPS4XP62701 263 aaKnown RBP7.31□□□□□ -1.24
SF3A1-208ENST00000485618 FAPQ12884 760 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 CCNIQ14094 377 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 KPNB1Q14974 876 aaKnown RBP7.31□□□□□ -1.24
SF3A1-208ENST00000485618 LAPTM4AQ15012 233 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 ATP6AP1Q15904 470 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 RFX4Q33E94 735 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 FBXW10Q5XX13 1052 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 SHQ1Q6PI26 577 aaKnown RBP7.31□□□□□ -1.24
SF3A1-208ENST00000485618 ZNF474Q6S9Z5 364 aaPredicted RBP7.31□□□□□ -1.24
SF3A1-208ENST00000485618 BHLHA15Q7RTS1 189 aaPredicted RBP7.31□□□□□ -1.24
SF3A1-208ENST00000485618 TSEN54Q7Z6J9 526 aaKnown RBP7.31□□□□□ -1.24
SF3A1-208ENST00000485618 DPPA2Q7Z7J5 298 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 ZER1Q7Z7L7 766 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 ADCK1Q86TW2 530 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 CXorf67Q86X51 503 aaPredicted RBP7.31□□□□□ -1.24
SF3A1-208ENST00000485618 DMRTC2Q8IXT2 367 aaPredicted RBP7.31□□□□□ -1.24
SF3A1-208ENST00000485618 C20orf196Q8IYI0 205 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 GABRG1Q8N1C3 465 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 C17orf78Q8N4C9 275 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 AQP11Q8NBQ7 271 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 OR10G2Q8NGC3 310 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 OR13C2Q8NGS9 318 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 OR5K1Q8NHB7 308 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 FANK1Q8TC84 345 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 ZNF385AQ96PM9 386 aaKnown RBP7.31□□□□□ -1.24
SF3A1-208ENST00000485618 OR2M2Q96R28 347 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 FUZQ9BT04 418 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 ALG12Q9BV10 488 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 DGCR6LQ9BY27 220 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 POLDIP3Q9BY77 421 aaKnown RBP7.31□□□□□ -1.24
SF3A1-208ENST00000485618 KCNN2Q9H2S1 579 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 OBP2BQ9NPH6 170 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 GLTPQ9NZD2 209 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 PDP1Q9P0J1 537 aaPredicted RBP7.31□□□□□ -1.24
SF3A1-208ENST00000485618 B3GAT1Q9P2W7 334 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 BAIAP2Q9UQB8 552 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 ZFHX3Q15911 3703 aa7.31□□□□□ -1.24
SF3A1-208ENST00000485618 NF1P21359 2839 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 TRAV27A0A087WT01 109 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 SH3D21A4FU49 640 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 RPL36A-HNRNPH2H7BZ11 118 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 M0R3G1 203 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 IMPA2O14732 288 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 PIP5K1CO60331 668 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 RAMP1O60894 148 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 PTP4A3O75365 173 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 TIPRLO75663 272 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 ZNF432O94892 652 aa7.3□□□□□ -1.24
SF3A1-208ENST00000485618 FARS2O95363 451 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms